RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 MXD4Q14582 209 aaPredicted RBP17.46■□□□□ 0.39
CCDC90B-201ENST00000260054 FAM26FQ5R3K3 315 aa17.46■□□□□ 0.39
CCDC90B-201ENST00000260054 GLIS3Q8NEA6 775 aa17.46■□□□□ 0.39
CCDC90B-201ENST00000260054 IFT74Q96LB3 600 aa17.46■□□□□ 0.39
CCDC90B-201ENST00000260054 KIFC3Q9BVG8 833 aa17.46■□□□□ 0.39
CCDC90B-201ENST00000260054 RMND1Q9NWS8 449 aa17.46■□□□□ 0.39
CCDC90B-201ENST00000260054 SEL1LQ9UBV2 794 aa17.46■□□□□ 0.39
CCDC90B-201ENST00000260054 CD4P01730 458 aa17.45■□□□□ 0.38
CCDC90B-201ENST00000260054 NMT1P30419 496 aaKnown RBP17.45■□□□□ 0.38
CCDC90B-201ENST00000260054 NAMPTP43490 491 aa17.45■□□□□ 0.38
CCDC90B-201ENST00000260054 CASP5P51878 434 aa17.45■□□□□ 0.38
CCDC90B-201ENST00000260054 TMEM62Q0P6H9 643 aa17.45■□□□□ 0.38
CCDC90B-201ENST00000260054 MORC3Q14149 939 aa17.45■□□□□ 0.38
CCDC90B-201ENST00000260054 TRIM60Q495X7 471 aa17.45■□□□□ 0.38
CCDC90B-201ENST00000260054 ANKRD33Q7Z3H0 272 aa17.45■□□□□ 0.38
CCDC90B-201ENST00000260054 FAM178BQ8IXR5 827 aa17.45■□□□□ 0.38
CCDC90B-201ENST00000260054 KIAA0895Q8NCT3 520 aa17.45■□□□□ 0.38
CCDC90B-201ENST00000260054 CCDC47Q96A33 483 aaKnown RBP17.45■□□□□ 0.38
CCDC90B-201ENST00000260054 NLRP4Q96MN2 994 aa17.45■□□□□ 0.38
CCDC90B-201ENST00000260054 SLC39A2Q9NP94 309 aa17.45■□□□□ 0.38
CCDC90B-201ENST00000260054 GDAQ9Y2T3 454 aa17.45■□□□□ 0.38
CCDC90B-201ENST00000260054 MROH7Q68CQ1 1323 aa17.45■□□□□ 0.38
CCDC90B-201ENST00000260054 LRRIQ4A6NIV6 560 aa17.45■□□□□ 0.38
CCDC90B-201ENST00000260054 CCDC169A6NNP5 214 aa17.45■□□□□ 0.38
CCDC90B-201ENST00000260054 SLC16A4O15374 487 aa17.45■□□□□ 0.38
CCDC90B-201ENST00000260054 LETM1O95202 739 aaPredicted RBP17.45■□□□□ 0.38
CCDC90B-201ENST00000260054 SRGAP2CP0DJJ0 459 aa17.45■□□□□ 0.38
CCDC90B-201ENST00000260054 GPC3P51654 580 aa17.45■□□□□ 0.38
CCDC90B-201ENST00000260054 NCKAP1LP55160 1127 aa17.45■□□□□ 0.38
CCDC90B-201ENST00000260054 NLRP11P59045 1033 aaKnown RBP17.45■□□□□ 0.38
CCDC90B-201ENST00000260054 PPP2R5AQ15172 486 aa17.45■□□□□ 0.38
CCDC90B-201ENST00000260054 LRRC26Q2I0M4 334 aa17.45■□□□□ 0.38
CCDC90B-201ENST00000260054 TRIM71Q2Q1W2 868 aaKnown RBP17.45■□□□□ 0.38
CCDC90B-201ENST00000260054 RPAINQ86UA6 219 aa17.45■□□□□ 0.38
CCDC90B-201ENST00000260054 SMYD4Q8IYR2 804 aaPredicted RBP17.45■□□□□ 0.38
CCDC90B-201ENST00000260054 RNF149Q8NC42 400 aa17.45■□□□□ 0.38
CCDC90B-201ENST00000260054 SPIRE2Q8WWL2 714 aa17.45■□□□□ 0.38
CCDC90B-201ENST00000260054 NTPCRQ9BSD7 190 aaKnown RBP17.45■□□□□ 0.38
CCDC90B-201ENST00000260054 MRPL44Q9H9J2 332 aaKnown RBP17.45■□□□□ 0.38
CCDC90B-201ENST00000260054 A0A087WZ62 844 aa17.44■□□□□ 0.38
CCDC90B-201ENST00000260054 ASAP2O43150 1006 aa17.44■□□□□ 0.38
CCDC90B-201ENST00000260054 GPR32O75388 356 aa17.44■□□□□ 0.38
CCDC90B-201ENST00000260054 TLE2Q04725 743 aa17.44■□□□□ 0.38
CCDC90B-201ENST00000260054 PSMD2Q13200 908 aa17.44■□□□□ 0.38
CCDC90B-201ENST00000260054 KIZQ2M2Z5 673 aa17.44■□□□□ 0.38
CCDC90B-201ENST00000260054 ZNF658Q5TYW1 1059 aaPredicted RBP17.44■□□□□ 0.38
CCDC90B-201ENST00000260054 ZNF720Q7Z2F6 126 aa17.44■□□□□ 0.38
CCDC90B-201ENST00000260054 NME8Q8N427 588 aa17.44■□□□□ 0.38
CCDC90B-201ENST00000260054 TRIML1Q8N9V2 468 aa17.44■□□□□ 0.38
CCDC90B-201ENST00000260054 TOX2Q96NM4 488 aa17.44■□□□□ 0.38
CCDC90B-201ENST00000260054 FDXACB1Q9BRP7 624 aaPredicted RBP17.44■□□□□ 0.38
CCDC90B-201ENST00000260054 ADAMTS10Q9H324 1103 aa17.44■□□□□ 0.38
CCDC90B-201ENST00000260054 KMT5AQ9NQR1 393 aa17.44■□□□□ 0.38
CCDC90B-201ENST00000260054 K7ENM7 598 aa17.43■□□□□ 0.38
CCDC90B-201ENST00000260054 MYBP10242 640 aa17.43■□□□□ 0.38
CCDC90B-201ENST00000260054 MAPTP10636 758 aaKnown RBP17.43■□□□□ 0.38
CCDC90B-201ENST00000260054 SMTNP53814 917 aa17.43■□□□□ 0.38
CCDC90B-201ENST00000260054 TFDP1Q14186 410 aa17.43■□□□□ 0.38
CCDC90B-201ENST00000260054 ZC2HC1CQ53FD0 456 aaPredicted RBP17.43■□□□□ 0.38
CCDC90B-201ENST00000260054 TMEM161BQ8NDZ6 487 aa17.43■□□□□ 0.38
CCDC90B-201ENST00000260054 DEPTORQ8TB45 409 aa17.43■□□□□ 0.38
CCDC90B-201ENST00000260054 CDHR5Q9HBB8 845 aa17.43■□□□□ 0.38
CCDC90B-201ENST00000260054 IFT122Q9HBG6 1241 aa17.43■□□□□ 0.38
CCDC90B-201ENST00000260054 ARHGAP28Q9P2N2 729 aa17.43■□□□□ 0.38
CCDC90B-201ENST00000260054 ATP11BQ9Y2G3 1177 aa17.43■□□□□ 0.38
CCDC90B-201ENST00000260054 RBAK-RBAKDNI3L0D1 243 aa17.42■□□□□ 0.38
CCDC90B-201ENST00000260054 TLR3O15455 904 aaKnown RBP17.42■□□□□ 0.38
CCDC90B-201ENST00000260054 PPP1R37O75864 691 aa17.42■□□□□ 0.38
CCDC90B-201ENST00000260054 GCNT3O95395 438 aa17.42■□□□□ 0.38
CCDC90B-201ENST00000260054 THPOP40225 353 aa17.42■□□□□ 0.38
CCDC90B-201ENST00000260054 FAAP100Q0VG06 881 aa17.42■□□□□ 0.38
CCDC90B-201ENST00000260054 CDCA2Q69YH5 1023 aaPredicted RBP17.42■□□□□ 0.38
CCDC90B-201ENST00000260054 SASS6Q6UVJ0 657 aa17.42■□□□□ 0.38
CCDC90B-201ENST00000260054 HAUS6Q7Z4H7 955 aa17.42■□□□□ 0.38
CCDC90B-201ENST00000260054 RSPH3Q86UC2 560 aa17.42■□□□□ 0.38
CCDC90B-201ENST00000260054 ZNF410Q86VK4 478 aa17.42■□□□□ 0.38
CCDC90B-201ENST00000260054 NLRP7Q8WX94 980 aa17.42■□□□□ 0.38
CCDC90B-201ENST00000260054 FUCA2Q9BTY2 467 aa17.42■□□□□ 0.38
CCDC90B-201ENST00000260054 STRA6Q9BX79 667 aa17.42■□□□□ 0.38
CCDC90B-201ENST00000260054 ST6GALNAC4Q9H4F1 302 aa17.42■□□□□ 0.38
CCDC90B-201ENST00000260054 GINS2Q9Y248 185 aa17.42■□□□□ 0.38
CCDC90B-201ENST00000260054 CCDC85CA6NKD9 419 aa17.42■□□□□ 0.38
CCDC90B-201ENST00000260054 DCDC2CA8MYV0 355 aa17.42■□□□□ 0.38
CCDC90B-201ENST00000260054 RPLP2P05387 115 aaKnown RBP17.42■□□□□ 0.38
CCDC90B-201ENST00000260054 CTSHP09668 335 aa17.42■□□□□ 0.38
CCDC90B-201ENST00000260054 NLRP12P59046 1061 aa17.42■□□□□ 0.38
CCDC90B-201ENST00000260054 PTENP60484 403 aa17.42■□□□□ 0.38
CCDC90B-201ENST00000260054 MRPS6P82932 125 aaKnown RBP17.42■□□□□ 0.38
CCDC90B-201ENST00000260054 POU5F1BQ06416 359 aa17.42■□□□□ 0.38
CCDC90B-201ENST00000260054 MGAT3Q09327 533 aa17.42■□□□□ 0.38
CCDC90B-201ENST00000260054 DPCR1Q3MIW9 517 aa17.42■□□□□ 0.38
CCDC90B-201ENST00000260054 EPM2AIP1Q7L775 607 aaPredicted RBP17.42■□□□□ 0.38
CCDC90B-201ENST00000260054 TNS4Q8IZW8 715 aa17.42■□□□□ 0.38
CCDC90B-201ENST00000260054 SCFD1Q8WVM8 642 aa17.42■□□□□ 0.38
CCDC90B-201ENST00000260054 SCLT1Q96NL6 688 aa17.42■□□□□ 0.38
CCDC90B-201ENST00000260054 OSMRQ99650 979 aa17.42■□□□□ 0.38
CCDC90B-201ENST00000260054 KCNG1Q9UIX4 513 aa17.42■□□□□ 0.38
CCDC90B-201ENST00000260054 MAPK8IP1Q9UQF2 711 aa17.42■□□□□ 0.38
CCDC90B-201ENST00000260054 CDY2AQ9Y6F7 541 aa17.42■□□□□ 0.38
CCDC90B-201ENST00000260054 DENND3A2RUS2 1198 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms