RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 HSDL1Q3SXM5 330 aa19.25■□□□□ 0.67
SRSF1-201ENST00000258962 UTP14CQ5TAP6 766 aaKnown RBP19.25■□□□□ 0.67
SRSF1-201ENST00000258962 PLA2G4FQ68DD2 849 aa19.25■□□□□ 0.67
SRSF1-201ENST00000258962 SWSAP1Q6NVH7 229 aa19.25■□□□□ 0.67
SRSF1-201ENST00000258962 MIS18BP1Q6P0N0 1132 aa19.25■□□□□ 0.67
SRSF1-201ENST00000258962 FIZ1Q96SL8 496 aa19.25■□□□□ 0.67
SRSF1-201ENST00000258962 KCTD10Q9H3F6 313 aa19.25■□□□□ 0.67
SRSF1-201ENST00000258962 RTN4Q9NQC3 1192 aaKnown RBP19.25■□□□□ 0.67
SRSF1-201ENST00000258962 TAB2Q9NYJ8 693 aa19.25■□□□□ 0.67
SRSF1-201ENST00000258962 CLTBP09497 229 aa19.24■□□□□ 0.67
SRSF1-201ENST00000258962 EEF1GP26641 437 aaKnown RBP19.24■□□□□ 0.67
SRSF1-201ENST00000258962 HOXD13P35453 343 aa19.24■□□□□ 0.67
SRSF1-201ENST00000258962 LRRC55Q6ZSA7 311 aa19.24■□□□□ 0.67
SRSF1-201ENST00000258962 ANO5Q75V66 913 aa19.24■□□□□ 0.67
SRSF1-201ENST00000258962 NELFCDQ8IXH7 590 aa19.24■□□□□ 0.67
SRSF1-201ENST00000258962 SLC43A3Q8NBI5 491 aa19.24■□□□□ 0.67
SRSF1-201ENST00000258962 CACTINQ8WUQ7 758 aaKnown RBP19.24■□□□□ 0.67
SRSF1-201ENST00000258962 ATP6V0A1Q93050 837 aa19.24■□□□□ 0.67
SRSF1-201ENST00000258962 EEF2KMTQ96G04 330 aa19.24■□□□□ 0.67
SRSF1-201ENST00000258962 LBHD1Q9BQE6 289 aaPredicted RBP19.24■□□□□ 0.67
SRSF1-201ENST00000258962 SH2D3AQ9BRG2 576 aa19.24■□□□□ 0.67
SRSF1-201ENST00000258962 PARVGQ9HBI0 331 aa19.24■□□□□ 0.67
SRSF1-201ENST00000258962 TMEM39AQ9NV64 488 aa19.24■□□□□ 0.67
SRSF1-201ENST00000258962 USO1O60763 962 aaKnown RBP19.23■□□□□ 0.67
SRSF1-201ENST00000258962 PBX1P40424 430 aa19.23■□□□□ 0.67
SRSF1-201ENST00000258962 NPEPPSP55786 919 aa19.23■□□□□ 0.67
SRSF1-201ENST00000258962 BMT2Q1RMZ1 405 aa19.23■□□□□ 0.67
SRSF1-201ENST00000258962 NBPF20Q3BBV1 942 aa19.23■□□□□ 0.67
SRSF1-201ENST00000258962 FAM47CQ5HY64 1035 aa19.23■□□□□ 0.67
SRSF1-201ENST00000258962 MYCT1Q8N699 235 aa19.23■□□□□ 0.67
SRSF1-201ENST00000258962 CNOT6LQ96LI5 555 aaKnown RBP19.23■□□□□ 0.67
SRSF1-201ENST00000258962 TSG101Q99816 390 aa19.23■□□□□ 0.67
SRSF1-201ENST00000258962 MRPL44Q9H9J2 332 aaKnown RBP19.23■□□□□ 0.67
SRSF1-201ENST00000258962 PDLIM7Q9NR12 457 aa19.23■□□□□ 0.67
SRSF1-201ENST00000258962 SEL1LQ9UBV2 794 aa19.23■□□□□ 0.67
SRSF1-201ENST00000258962 IGKV6D-21A0A0A0MT36 114 aa19.22■□□□□ 0.67
SRSF1-201ENST00000258962 GSTTP1A0A1W2PQM5 241 aa19.22■□□□□ 0.67
SRSF1-201ENST00000258962 DKC1O60832 514 aaKnown RBP eCLIP19.22■□□□□ 0.67
SRSF1-201ENST00000258962 NMT1P30419 496 aaKnown RBP19.22■□□□□ 0.67
SRSF1-201ENST00000258962 PRKCEQ02156 737 aa19.22■□□□□ 0.67
SRSF1-201ENST00000258962 LRMPQ12912 555 aa19.22■□□□□ 0.67
SRSF1-201ENST00000258962 XKR9Q5GH70 373 aa19.22■□□□□ 0.67
SRSF1-201ENST00000258962 ANKRD20A12PQ8NF67 263 aa19.22■□□□□ 0.67
SRSF1-201ENST00000258962 ZNF507Q8TCN5 953 aa19.22■□□□□ 0.67
SRSF1-201ENST00000258962 KATNAL1Q9BW62 490 aa19.22■□□□□ 0.67
SRSF1-201ENST00000258962 VPS16Q9H269 839 aa19.22■□□□□ 0.67
SRSF1-201ENST00000258962 GRIN2DO15399 1336 aa19.22■□□□□ 0.67
SRSF1-201ENST00000258962 PRPF6O94906 941 aaKnown RBP19.21■□□□□ 0.67
SRSF1-201ENST00000258962 KIF20AO95235 890 aa19.21■□□□□ 0.67
SRSF1-201ENST00000258962 ATP4AP20648 1035 aa19.21■□□□□ 0.67
SRSF1-201ENST00000258962 GSDMDP57764 484 aa19.21■□□□□ 0.67
SRSF1-201ENST00000258962 FAAP100Q0VG06 881 aa19.21■□□□□ 0.67
SRSF1-201ENST00000258962 TBX2Q13207 712 aaPredicted RBP19.21■□□□□ 0.67
SRSF1-201ENST00000258962 FILIP1LQ4L180 1135 aa19.21■□□□□ 0.67
SRSF1-201ENST00000258962 NFRKBQ6P4R8 1299 aa19.21■□□□□ 0.67
SRSF1-201ENST00000258962 TRMT1LQ7Z2T5 733 aaKnown RBP19.21■□□□□ 0.67
SRSF1-201ENST00000258962 FAM114A1Q8IWE2 563 aa19.21■□□□□ 0.67
SRSF1-201ENST00000258962 FAM126BQ8IXS8 530 aa19.21■□□□□ 0.67
SRSF1-201ENST00000258962 PCYT2Q99447 389 aa19.21■□□□□ 0.67
SRSF1-201ENST00000258962 RRAGDQ9NQL2 400 aaPredicted RBP19.21■□□□□ 0.67
SRSF1-201ENST00000258962 MAGEC2Q9UBF1 373 aaPredicted RBP19.21■□□□□ 0.67
SRSF1-201ENST00000258962 MAFBQ9Y5Q3 323 aaPredicted RBP19.21■□□□□ 0.67
SRSF1-201ENST00000258962 N4BP3O15049 544 aa19.2■□□□□ 0.66
SRSF1-201ENST00000258962 GCNT3O95395 438 aa19.2■□□□□ 0.66
SRSF1-201ENST00000258962 ZNF286BP0CG31 522 aa19.2■□□□□ 0.66
SRSF1-201ENST00000258962 HOXD8P13378 290 aaPredicted RBP19.2■□□□□ 0.66
SRSF1-201ENST00000258962 KNOP1Q1ED39 458 aaKnown RBP19.2■□□□□ 0.66
SRSF1-201ENST00000258962 SPECC1LQ69YQ0 1117 aa19.2■□□□□ 0.66
SRSF1-201ENST00000258962 ARMCX5Q6P1M9 558 aa19.2■□□□□ 0.66
SRSF1-201ENST00000258962 MAEAQ7L5Y9 396 aa19.2■□□□□ 0.66
SRSF1-201ENST00000258962 CREBRFQ8IUR6 639 aa19.2■□□□□ 0.66
SRSF1-201ENST00000258962 LRRC8AQ8IWT6 810 aa19.2■□□□□ 0.66
SRSF1-201ENST00000258962 ZC3H3Q8IXZ2 948 aaKnown RBP19.2■□□□□ 0.66
SRSF1-201ENST00000258962 CCDC43Q96MW1 224 aaKnown RBP19.2■□□□□ 0.66
SRSF1-201ENST00000258962 GPR20Q99678 358 aa19.2■□□□□ 0.66
SRSF1-201ENST00000258962 TIPINQ9BVW5 301 aa19.2■□□□□ 0.66
SRSF1-201ENST00000258962 ZNF302Q9NR11 478 aa19.2■□□□□ 0.66
SRSF1-201ENST00000258962 ZMYM2Q9UBW7 1377 aa19.2■□□□□ 0.66
SRSF1-201ENST00000258962 TRIM43BA6NCK2 446 aa19.2■□□□□ 0.66
SRSF1-201ENST00000258962 KIAA0355O15063 1070 aa19.2■□□□□ 0.66
SRSF1-201ENST00000258962 EIF3DO15371 548 aaKnown RBP eCLIP19.2■□□□□ 0.66
SRSF1-201ENST00000258962 RAG1P15918 1043 aa19.2■□□□□ 0.66
SRSF1-201ENST00000258962 MAGEA10P43363 369 aaPredicted RBP19.2■□□□□ 0.66
SRSF1-201ENST00000258962 PSEN2P49810 448 aa19.2■□□□□ 0.66
SRSF1-201ENST00000258962 PTPN11Q06124 597 aaPredicted RBP19.2■□□□□ 0.66
SRSF1-201ENST00000258962 MFSD10Q14728 455 aa19.2■□□□□ 0.66
SRSF1-201ENST00000258962 ODR4Q5SWX8 454 aa19.2■□□□□ 0.66
SRSF1-201ENST00000258962 CHRDL2Q6WN34 429 aa19.2■□□□□ 0.66
SRSF1-201ENST00000258962 OTUD6AQ7L8S5 288 aa19.2■□□□□ 0.66
SRSF1-201ENST00000258962 FAM178BQ8IXR5 827 aa19.2■□□□□ 0.66
SRSF1-201ENST00000258962 C7orf31Q8N865 590 aa19.2■□□□□ 0.66
SRSF1-201ENST00000258962 SEPT1Q8WYJ6 367 aa19.2■□□□□ 0.66
SRSF1-201ENST00000258962 KAT2BQ92831 832 aa19.2■□□□□ 0.66
SRSF1-201ENST00000258962 TRIM43Q96BQ3 446 aaPredicted RBP19.2■□□□□ 0.66
SRSF1-201ENST00000258962 STRA6Q9BX79 667 aa19.2■□□□□ 0.66
SRSF1-201ENST00000258962 TRPV6Q9H1D0 765 aa19.2■□□□□ 0.66
SRSF1-201ENST00000258962 PYCARDQ9ULZ3 195 aa19.2■□□□□ 0.66
SRSF1-201ENST00000258962 LGALS16A8MUM7 142 aa19.19■□□□□ 0.66
SRSF1-201ENST00000258962 PPP1R37O75864 691 aa19.19■□□□□ 0.66
SRSF1-201ENST00000258962 UBE4BO95155 1302 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms