RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 POMZP3Q6PJE2 187 aa8.3□□□□□ -1.08
GPNMB-201ENST00000258733 BTNL9Q6UXG8 535 aa8.3□□□□□ -1.08
GPNMB-201ENST00000258733 ANO5Q75V66 913 aa8.3□□□□□ -1.08
GPNMB-201ENST00000258733 PODNQ7Z5L7 613 aa8.3□□□□□ -1.08
GPNMB-201ENST00000258733 CCNJLQ8IV13 435 aa8.3□□□□□ -1.08
GPNMB-201ENST00000258733 PMEPA1Q969W9 287 aa8.3□□□□□ -1.08
GPNMB-201ENST00000258733 SEC62Q99442 399 aaKnown RBP8.3□□□□□ -1.08
GPNMB-201ENST00000258733 PPP1R12CQ9BZL4 782 aa8.3□□□□□ -1.08
GPNMB-201ENST00000258733 FAF1Q9UNN5 650 aaPredicted RBP8.3□□□□□ -1.08
GPNMB-201ENST00000258733 SLC8A2Q9UPR5 921 aa8.3□□□□□ -1.08
GPNMB-201ENST00000258733 EPN1Q9Y6I3 576 aaPredicted RBP8.3□□□□□ -1.08
GPNMB-201ENST00000258733 ATP10BO94823 1461 aa8.3□□□□□ -1.08
GPNMB-201ENST00000258733 hCG_1642624A0A1W2PR95 340 aa8.3□□□□□ -1.08
GPNMB-201ENST00000258733 WNT7AO00755 349 aa8.3□□□□□ -1.08
GPNMB-201ENST00000258733 PPIP5K2O43314 1243 aa8.3□□□□□ -1.08
GPNMB-201ENST00000258733 CUTAO60888 179 aa8.3□□□□□ -1.08
GPNMB-201ENST00000258733 ARIH2O95376 493 aa8.3□□□□□ -1.08
GPNMB-201ENST00000258733 APBB3O95704 486 aa8.3□□□□□ -1.08
GPNMB-201ENST00000258733 NPPAP01160 153 aa8.3□□□□□ -1.08
GPNMB-201ENST00000258733 ACADSP16219 412 aa8.3□□□□□ -1.08
GPNMB-201ENST00000258733 PSMA4P25789 261 aaKnown RBP8.3□□□□□ -1.08
GPNMB-201ENST00000258733 SERPINB3P29508 390 aa8.3□□□□□ -1.08
GPNMB-201ENST00000258733 HOXD13P35453 343 aa8.3□□□□□ -1.08
GPNMB-201ENST00000258733 ZNF165P49910 485 aa8.3□□□□□ -1.08
GPNMB-201ENST00000258733 MLLT1Q03111 559 aaPredicted RBP8.3□□□□□ -1.08
GPNMB-201ENST00000258733 GALNT1Q10472 559 aaPredicted RBP8.3□□□□□ -1.08
GPNMB-201ENST00000258733 ODR4Q5SWX8 454 aa8.3□□□□□ -1.08
GPNMB-201ENST00000258733 C4orf22Q6V702 233 aa8.3□□□□□ -1.08
GPNMB-201ENST00000258733 TMC7Q7Z402 723 aa8.3□□□□□ -1.08
GPNMB-201ENST00000258733 CPLX4Q7Z7G2 160 aa8.3□□□□□ -1.08
GPNMB-201ENST00000258733 SCYL3Q8IZE3 742 aa8.3□□□□□ -1.08
GPNMB-201ENST00000258733 SHCBP1Q8NEM2 672 aa8.3□□□□□ -1.08
GPNMB-201ENST00000258733 DHX58Q96C10 678 aa8.3□□□□□ -1.08
GPNMB-201ENST00000258733 CCDC77Q9BR77 488 aa8.3□□□□□ -1.08
GPNMB-201ENST00000258733 STARD7Q9NQZ5 370 aa8.3□□□□□ -1.08
GPNMB-201ENST00000258733 SDHAF3Q9NRP4 125 aa8.3□□□□□ -1.08
GPNMB-201ENST00000258733 ZBTB40Q9NUA8 1239 aa8.3□□□□□ -1.08
GPNMB-201ENST00000258733 GID8Q9NWU2 228 aa8.3□□□□□ -1.08
GPNMB-201ENST00000258733 ABI2Q9NYB9 513 aaPredicted RBP8.3□□□□□ -1.08
GPNMB-201ENST00000258733 IMPACTQ9P2X3 320 aa8.3□□□□□ -1.08
GPNMB-201ENST00000258733 RNF112Q9ULX5 631 aa8.3□□□□□ -1.08
GPNMB-201ENST00000258733 C9orf84Q5VXU9 1444 aa8.3□□□□□ -1.08
GPNMB-201ENST00000258733 CARMIL2Q6F5E8 1435 aa8.3□□□□□ -1.08
GPNMB-201ENST00000258733 CCDC163A0A0D9SF12 145 aa8.29□□□□□ -1.08
GPNMB-201ENST00000258733 RETP07949 1114 aa8.29□□□□□ -1.08
GPNMB-201ENST00000258733 RHOXF2BP0C7M4 288 aa8.29□□□□□ -1.08
GPNMB-201ENST00000258733 CPA1P15085 419 aa8.29□□□□□ -1.08
GPNMB-201ENST00000258733 TBXAS1P24557 533 aaPredicted RBP8.29□□□□□ -1.08
GPNMB-201ENST00000258733 PPP2R1AP30153 589 aa8.29□□□□□ -1.08
GPNMB-201ENST00000258733 CSTF2P33240 577 aaKnown RBP eCLIP8.29□□□□□ -1.08
GPNMB-201ENST00000258733 PTGS2P35354 604 aa8.29□□□□□ -1.08
GPNMB-201ENST00000258733 VASPP50552 380 aaPredicted RBP8.29□□□□□ -1.08
GPNMB-201ENST00000258733 CDK18Q07002 472 aa8.29□□□□□ -1.08
GPNMB-201ENST00000258733 GRM1Q13255 1194 aa8.29□□□□□ -1.08
GPNMB-201ENST00000258733 SF3B4Q15427 424 aaKnown RBP eCLIP8.29□□□□□ -1.08
GPNMB-201ENST00000258733 INO80DQ53TQ3 878 aaPredicted RBP8.29□□□□□ -1.08
GPNMB-201ENST00000258733 CLVS2Q5SYC1 327 aa8.29□□□□□ -1.08
GPNMB-201ENST00000258733 WDR93Q6P2C0 686 aa8.29□□□□□ -1.08
GPNMB-201ENST00000258733 JAZF1Q86VZ6 243 aa8.29□□□□□ -1.08
GPNMB-201ENST00000258733 ZNF565Q8N9K5 539 aa8.29□□□□□ -1.08
GPNMB-201ENST00000258733 CYFIP2Q96F07 1278 aa8.29□□□□□ -1.08
GPNMB-201ENST00000258733 DHRS9Q9BPW9 319 aa8.29□□□□□ -1.08
GPNMB-201ENST00000258733 RHOXF2Q9BQY4 288 aa8.29□□□□□ -1.08
GPNMB-201ENST00000258733 NUP85Q9BW27 656 aa8.29□□□□□ -1.08
GPNMB-201ENST00000258733 APOL5Q9BWW9 433 aa8.29□□□□□ -1.08
GPNMB-201ENST00000258733 MMRN2Q9H8L6 949 aa8.29□□□□□ -1.08
GPNMB-201ENST00000258733 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.29□□□□□ -1.08
GPNMB-201ENST00000258733 IQGAP1P46940 1657 aa8.29□□□□□ -1.08
GPNMB-201ENST00000258733 NSD2O96028 1365 aa8.29□□□□□ -1.08
GPNMB-201ENST00000258733 CYP2D7A0A087X1C5 515 aa8.29□□□□□ -1.08
GPNMB-201ENST00000258733 A0A088AWK7 358 aa8.29□□□□□ -1.08
GPNMB-201ENST00000258733 SRRM3A6NNA2 597 aaPredicted RBP8.29□□□□□ -1.08
GPNMB-201ENST00000258733 RSPH10B2B2RC85 870 aa8.29□□□□□ -1.08
GPNMB-201ENST00000258733 RSPH10BP0C881 870 aa8.29□□□□□ -1.08
GPNMB-201ENST00000258733 HOXB1P14653 301 aaPredicted RBP8.29□□□□□ -1.08
GPNMB-201ENST00000258733 SFPQP23246 707 aaKnown RBP eCLIP8.29□□□□□ -1.08
GPNMB-201ENST00000258733 MASP1P48740 699 aa8.29□□□□□ -1.08
GPNMB-201ENST00000258733 CACNA2D1P54289 1103 aa8.29□□□□□ -1.08
GPNMB-201ENST00000258733 GOLGA8FQ08AF8 430 aa8.29□□□□□ -1.08
GPNMB-201ENST00000258733 GOLGA8DPQ0D2H9 430 aa8.29□□□□□ -1.08
GPNMB-201ENST00000258733 TRAP1Q12931 704 aaKnown RBP8.29□□□□□ -1.08
GPNMB-201ENST00000258733 DCTN2Q13561 401 aaKnown RBP8.29□□□□□ -1.08
GPNMB-201ENST00000258733 MOGSQ13724 837 aa8.29□□□□□ -1.08
GPNMB-201ENST00000258733 SHEQ5VZ18 495 aa8.29□□□□□ -1.08
GPNMB-201ENST00000258733 PPP1R42Q7Z4L9 355 aa8.29□□□□□ -1.08
GPNMB-201ENST00000258733 PATL1Q86TB9 770 aaKnown RBP8.29□□□□□ -1.08
GPNMB-201ENST00000258733 SPATA18Q8TC71 538 aa8.29□□□□□ -1.08
GPNMB-201ENST00000258733 NLRP7Q8WX94 980 aa8.29□□□□□ -1.08
GPNMB-201ENST00000258733 SECISBP2Q96T21 854 aaKnown RBP8.29□□□□□ -1.08
GPNMB-201ENST00000258733 SPZ1Q9BXG8 430 aa8.29□□□□□ -1.08
GPNMB-201ENST00000258733 NFE2L3Q9Y4A8 694 aa8.29□□□□□ -1.08
GPNMB-201ENST00000258733 FAM135AQ9P2D6 1515 aa8.29□□□□□ -1.08
GPNMB-201ENST00000258733 KIAA1210Q9ULL0 1709 aa8.29□□□□□ -1.08
GPNMB-201ENST00000258733 USP47Q96K76 1375 aa8.29□□□□□ -1.08
GPNMB-201ENST00000258733 CD109Q6YHK3 1445 aa8.29□□□□□ -1.08
GPNMB-201ENST00000258733 POGZQ7Z3K3 1410 aa8.29□□□□□ -1.08
GPNMB-201ENST00000258733 A6NJY4 79 aa8.28□□□□□ -1.08
GPNMB-201ENST00000258733 BTBD19C9JJ37 291 aa8.28□□□□□ -1.08
GPNMB-201ENST00000258733 IKBKBO14920 756 aa8.28□□□□□ -1.08
GPNMB-201ENST00000258733 CHEK2O96017 543 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms