RNA–Protein interactions for RNA: ENST00000253814.5

NDFIP1-201, Transcript of Nedd4 family interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP1, Length 3,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-201ENST00000253814 FGFBP2Q9BYJ0 223 aa18.88■□□□□ 0.61
NDFIP1-201ENST00000253814 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.88■□□□□ 0.61
NDFIP1-201ENST00000253814 FGFR1OP2Q9NVK5 253 aa18.88■□□□□ 0.61
NDFIP1-201ENST00000253814 KDM3BQ7LBC6 1761 aa18.87■□□□□ 0.61
NDFIP1-201ENST00000253814 TOPAZ1Q8N9V7 1692 aa18.87■□□□□ 0.61
NDFIP1-201ENST00000253814 PEX3P56589 373 aa18.87■□□□□ 0.61
NDFIP1-201ENST00000253814 C6orf163Q5TEZ5 329 aa18.87■□□□□ 0.61
NDFIP1-201ENST00000253814 LMNTD2Q8IXW0 634 aa18.87■□□□□ 0.61
NDFIP1-201ENST00000253814 LRRC8CQ8TDW0 803 aa18.87■□□□□ 0.61
NDFIP1-201ENST00000253814 SYN2Q92777 582 aaPredicted RBP18.87■□□□□ 0.61
NDFIP1-201ENST00000253814 C18orf8Q96DM3 657 aa18.87■□□□□ 0.61
NDFIP1-201ENST00000253814 PITPNM3Q9BZ71 974 aa18.87■□□□□ 0.61
NDFIP1-201ENST00000253814 TTYH3Q9C0H2 523 aa18.87■□□□□ 0.61
NDFIP1-201ENST00000253814 GDF3Q9NR23 364 aa18.87■□□□□ 0.61
NDFIP1-201ENST00000253814 MRC1P22897 1456 aa18.87■□□□□ 0.61
NDFIP1-201ENST00000253814 ELF1P32519 619 aa18.87■□□□□ 0.61
NDFIP1-201ENST00000253814 RNF207Q6ZRF8 634 aa18.87■□□□□ 0.61
NDFIP1-201ENST00000253814 EPS8L3Q8TE67 593 aaKnown RBP18.87■□□□□ 0.61
NDFIP1-201ENST00000253814 NUP85Q9BW27 656 aa18.87■□□□□ 0.61
NDFIP1-201ENST00000253814 CNOT8Q9UFF9 292 aaKnown RBP18.87■□□□□ 0.61
NDFIP1-201ENST00000253814 FMO5P49326 533 aa18.87■□□□□ 0.61
NDFIP1-201ENST00000253814 MFAP3P55082 362 aa18.87■□□□□ 0.61
NDFIP1-201ENST00000253814 SKOR1P84550 965 aa18.87■□□□□ 0.61
NDFIP1-201ENST00000253814 KAT2BQ92831 832 aa18.87■□□□□ 0.61
NDFIP1-201ENST00000253814 CASP5P51878 434 aa18.86■□□□□ 0.61
NDFIP1-201ENST00000253814 IL9RQ01113 521 aa18.86■□□□□ 0.61
NDFIP1-201ENST00000253814 ZNF564Q8TBZ8 553 aaPredicted RBP18.86■□□□□ 0.61
NDFIP1-201ENST00000253814 BTBD6Q96KE9 485 aa18.86■□□□□ 0.61
NDFIP1-201ENST00000253814 VCPKMTQ9H867 229 aa18.86■□□□□ 0.61
NDFIP1-201ENST00000253814 C1orf112Q9NSG2 853 aa18.86■□□□□ 0.61
NDFIP1-201ENST00000253814 EXOC7Q9UPT5 735 aa18.86■□□□□ 0.61
NDFIP1-201ENST00000253814 EXOC1LA0A1B0GW35 172 aa18.86■□□□□ 0.61
NDFIP1-201ENST00000253814 HNRNPDLO14979 420 aaKnown RBP18.86■□□□□ 0.61
NDFIP1-201ENST00000253814 PJA2O43164 708 aa18.86■□□□□ 0.61
NDFIP1-201ENST00000253814 CD19P15391 556 aa18.86■□□□□ 0.61
NDFIP1-201ENST00000253814 HSPA6P17066 643 aa18.86■□□□□ 0.61
NDFIP1-201ENST00000253814 CA4P22748 312 aa18.86■□□□□ 0.61
NDFIP1-201ENST00000253814 KCNA1Q09470 495 aa18.86■□□□□ 0.61
NDFIP1-201ENST00000253814 MUM1Q2TAK8 710 aa18.86■□□□□ 0.61
NDFIP1-201ENST00000253814 WDR78Q5VTH9 848 aa18.86■□□□□ 0.61
NDFIP1-201ENST00000253814 ANKRD20A3Q5VUR7 823 aa18.86■□□□□ 0.61
NDFIP1-201ENST00000253814 PASD1Q8IV76 773 aa18.86■□□□□ 0.61
NDFIP1-201ENST00000253814 CALR3Q96L12 384 aaKnown RBP18.86■□□□□ 0.61
NDFIP1-201ENST00000253814 ECT2Q9H8V3 914 aa18.86■□□□□ 0.61
NDFIP1-201ENST00000253814 COL5A2P05997 1499 aaPredicted RBP18.86■□□□□ 0.61
NDFIP1-201ENST00000253814 LMTK3Q96Q04 1460 aa18.86■□□□□ 0.61
NDFIP1-201ENST00000253814 HSPA9P38646 679 aaKnown RBP18.86■□□□□ 0.61
NDFIP1-201ENST00000253814 SCTRP47872 440 aa18.86■□□□□ 0.61
NDFIP1-201ENST00000253814 TAF11Q15544 211 aa18.86■□□□□ 0.61
NDFIP1-201ENST00000253814 CTAGE3PQ8IX95 158 aa18.86■□□□□ 0.61
NDFIP1-201ENST00000253814 ZNF384Q8TF68 577 aa18.86■□□□□ 0.61
NDFIP1-201ENST00000253814 SAAL1Q96ER3 474 aa18.86■□□□□ 0.61
NDFIP1-201ENST00000253814 ETNK1Q9HBU6 452 aa18.86■□□□□ 0.61
NDFIP1-201ENST00000253814 CLDN3O15551 220 aa18.85■□□□□ 0.61
NDFIP1-201ENST00000253814 CYP26A1O43174 497 aa18.85■□□□□ 0.61
NDFIP1-201ENST00000253814 FECHP22830 423 aa18.85■□□□□ 0.61
NDFIP1-201ENST00000253814 DYNLT1P63172 113 aa18.85■□□□□ 0.61
NDFIP1-201ENST00000253814 ARHGEF18Q6ZSZ5 1173 aa18.85■□□□□ 0.61
NDFIP1-201ENST00000253814 IQCKQ8N0W5 287 aa18.85■□□□□ 0.61
NDFIP1-201ENST00000253814 C9orf72Q96LT7 481 aa18.85■□□□□ 0.61
NDFIP1-201ENST00000253814 MYH2Q9UKX2 1941 aa18.85■□□□□ 0.61
NDFIP1-201ENST00000253814 MIF4GDA9UHW6 222 aaKnown RBP18.85■□□□□ 0.61
NDFIP1-201ENST00000253814 RASA4BC9J798 803 aa18.85■□□□□ 0.61
NDFIP1-201ENST00000253814 RASA4O43374 803 aa18.85■□□□□ 0.61
NDFIP1-201ENST00000253814 TLR2O60603 784 aa18.85■□□□□ 0.61
NDFIP1-201ENST00000253814 SPAG7O75391 227 aa18.85■□□□□ 0.61
NDFIP1-201ENST00000253814 CHRNA3P32297 505 aa18.85■□□□□ 0.61
NDFIP1-201ENST00000253814 MTM1Q13496 603 aa18.85■□□□□ 0.61
NDFIP1-201ENST00000253814 PPFIBP2Q8ND30 876 aa18.85■□□□□ 0.61
NDFIP1-201ENST00000253814 AGPAT1Q99943 283 aa18.85■□□□□ 0.61
NDFIP1-201ENST00000253814 RUSC1Q9BVN2 902 aa18.85■□□□□ 0.61
NDFIP1-201ENST00000253814 ESYT2A0FGR8 921 aa18.85■□□□□ 0.61
NDFIP1-201ENST00000253814 CCT8L1PA6NM43 557 aa18.85■□□□□ 0.61
NDFIP1-201ENST00000253814 PPEF1O14829 653 aaPredicted RBP18.85■□□□□ 0.61
NDFIP1-201ENST00000253814 ERFP50548 548 aa18.85■□□□□ 0.61
NDFIP1-201ENST00000253814 AGBL2Q5U5Z8 902 aa18.85■□□□□ 0.61
NDFIP1-201ENST00000253814 BBOX1O75936 387 aa18.84■□□□□ 0.61
NDFIP1-201ENST00000253814 GRK7Q8WTQ7 553 aa18.84■□□□□ 0.61
NDFIP1-201ENST00000253814 STK33Q9BYT3 514 aa18.84■□□□□ 0.61
NDFIP1-201ENST00000253814 SEMA4AQ9H3S1 761 aa18.84■□□□□ 0.61
NDFIP1-201ENST00000253814 NOP53Q9NZM5 478 aaKnown RBP18.84■□□□□ 0.61
NDFIP1-201ENST00000253814 SUCLA2Q9P2R7 463 aaPredicted RBP18.84■□□□□ 0.61
NDFIP1-201ENST00000253814 PI4KBQ9UBF8 816 aa18.84■□□□□ 0.61
NDFIP1-201ENST00000253814 PPP1R9AQ9ULJ8 1098 aa18.84■□□□□ 0.61
NDFIP1-201ENST00000253814 MED1Q15648 1581 aaPredicted RBP18.84■□□□□ 0.61
NDFIP1-201ENST00000253814 DIAPH2O60879 1101 aa18.84■□□□□ 0.61
NDFIP1-201ENST00000253814 COMTP21964 271 aa18.84■□□□□ 0.61
NDFIP1-201ENST00000253814 FLT3P36888 993 aa18.84■□□□□ 0.61
NDFIP1-201ENST00000253814 AP3B2Q13367 1082 aa18.84■□□□□ 0.61
NDFIP1-201ENST00000253814 KYNUQ16719 465 aa18.84■□□□□ 0.61
NDFIP1-201ENST00000253814 TSNAXIP1Q2TAA8 658 aa18.84■□□□□ 0.61
NDFIP1-201ENST00000253814 EPC2Q52LR7 807 aa18.84■□□□□ 0.61
NDFIP1-201ENST00000253814 BARGINQ6ZT62 677 aa18.84■□□□□ 0.61
NDFIP1-201ENST00000253814 TGS1Q96RS0 853 aaKnown RBP18.84■□□□□ 0.61
NDFIP1-201ENST00000253814 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.84■□□□□ 0.61
NDFIP1-201ENST00000253814 ABCB11O95342 1321 aa18.84■□□□□ 0.61
NDFIP1-201ENST00000253814 FAM187AA6NFU0 413 aa18.84■□□□□ 0.61
NDFIP1-201ENST00000253814 ECM1Q16610 540 aa18.84■□□□□ 0.61
NDFIP1-201ENST00000253814 AADACL2Q6P093 401 aa18.84■□□□□ 0.61
NDFIP1-201ENST00000253814 CYP2W1Q8TAV3 490 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms