RNA–Protein interactions for RNA: ENST00000253048.9

ZC3H4-201, Transcript of zinc finger CCCH-type containing 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ZC3H4, Length 6,119 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4-201ENST00000253048 EGFL8Q99944 293 aa15.33■□□□□ 0.04
ZC3H4-201ENST00000253048 ZSWIM5Q9P217 1185 aa15.33■□□□□ 0.04
ZC3H4-201ENST00000253048 MANSC4A6NHS7 340 aaPredicted RBP15.32■□□□□ 0.04
ZC3H4-201ENST00000253048 H7C4K7 107 aa15.32■□□□□ 0.04
ZC3H4-201ENST00000253048 GUCY2FP51841 1108 aa15.32■□□□□ 0.04
ZC3H4-201ENST00000253048 SCRN1Q12765 414 aa15.32■□□□□ 0.04
ZC3H4-201ENST00000253048 SSH2Q76I76 1423 aa15.32■□□□□ 0.04
ZC3H4-201ENST00000253048 AGBL3Q8NEM8 1001 aa15.32■□□□□ 0.04
ZC3H4-201ENST00000253048 G3BP2Q9UN86 482 aaKnown RBP15.32■□□□□ 0.04
ZC3H4-201ENST00000253048 KDM6AO15550 1401 aaPredicted RBP15.32■□□□□ 0.04
ZC3H4-201ENST00000253048 ACADMP11310 421 aa15.32■□□□□ 0.04
ZC3H4-201ENST00000253048 DDX5P17844 614 aaKnown RBP15.32■□□□□ 0.04
ZC3H4-201ENST00000253048 MSH2P43246 934 aa15.32■□□□□ 0.04
ZC3H4-201ENST00000253048 FOXD4Q12950 439 aaPredicted RBP15.32■□□□□ 0.04
ZC3H4-201ENST00000253048 TMEM35BQ8NCS4 154 aa15.32■□□□□ 0.04
ZC3H4-201ENST00000253048 FAM20AQ96MK3 541 aa15.32■□□□□ 0.04
ZC3H4-201ENST00000253048 ZSWIM6Q9HCJ5 1215 aa15.32■□□□□ 0.04
ZC3H4-201ENST00000253048 MID2Q9UJV3 735 aa15.32■□□□□ 0.04
ZC3H4-201ENST00000253048 ENTPD3O75355 529 aa15.32■□□□□ 0.04
ZC3H4-201ENST00000253048 MMP1P03956 469 aa15.32■□□□□ 0.04
ZC3H4-201ENST00000253048 PLCG1P19174 1290 aa15.32■□□□□ 0.04
ZC3H4-201ENST00000253048 SDC4P31431 198 aa15.32■□□□□ 0.04
ZC3H4-201ENST00000253048 MAN2A1Q16706 1144 aa15.32■□□□□ 0.04
ZC3H4-201ENST00000253048 HTATIP2Q9BUP3 242 aa15.32■□□□□ 0.04
ZC3H4-201ENST00000253048 OSBPL5Q9H0X9 879 aaPredicted RBP15.32■□□□□ 0.04
ZC3H4-201ENST00000253048 SAR1BQ9Y6B6 198 aa15.32■□□□□ 0.04
ZC3H4-201ENST00000253048 SYNGAP1Q96PV0 1343 aa15.32■□□□□ 0.04
ZC3H4-201ENST00000253048 RASSF7Q02833 373 aa15.32■□□□□ 0.04
ZC3H4-201ENST00000253048 PPP4R3CPQ6ZMV5 832 aa15.32■□□□□ 0.04
ZC3H4-201ENST00000253048 CHST13Q8NET6 341 aa15.32■□□□□ 0.04
ZC3H4-201ENST00000253048 PPP1R12CQ9BZL4 782 aa15.32■□□□□ 0.04
ZC3H4-201ENST00000253048 NEUROG2Q9H2A3 272 aa15.32■□□□□ 0.04
ZC3H4-201ENST00000253048 LCMT1Q9UIC8 334 aa15.32■□□□□ 0.04
ZC3H4-201ENST00000253048 PRR36Q9H6K5 1346 aa15.32■□□□□ 0.04
ZC3H4-201ENST00000253048 RRN3P2A6NIE6 340 aa15.31■□□□□ 0.04
ZC3H4-201ENST00000253048 DFFAO00273 331 aa15.31■□□□□ 0.04
ZC3H4-201ENST00000253048 SERPIND1P05546 499 aa15.31■□□□□ 0.04
ZC3H4-201ENST00000253048 MCAMP43121 646 aa15.31■□□□□ 0.04
ZC3H4-201ENST00000253048 ADGRF4Q8IZF3 695 aa15.31■□□□□ 0.04
ZC3H4-201ENST00000253048 USP28Q96RU2 1077 aa15.31■□□□□ 0.04
ZC3H4-201ENST00000253048 DNAJC7Q99615 494 aa15.31■□□□□ 0.04
ZC3H4-201ENST00000253048 LCP1P13796 627 aa15.31■□□□□ 0.04
ZC3H4-201ENST00000253048 GCLCP48506 637 aaPredicted RBP15.31■□□□□ 0.04
ZC3H4-201ENST00000253048 COPB1P53618 953 aaKnown RBP15.31■□□□□ 0.04
ZC3H4-201ENST00000253048 PTPN12Q05209 780 aaKnown RBP15.31■□□□□ 0.04
ZC3H4-201ENST00000253048 LBRQ14739 615 aaKnown RBP15.31■□□□□ 0.04
ZC3H4-201ENST00000253048 ADCK2Q7Z695 626 aa15.31■□□□□ 0.04
ZC3H4-201ENST00000253048 SCG3Q8WXD2 468 aaKnown RBP15.31■□□□□ 0.04
ZC3H4-201ENST00000253048 TBXAS1P24557 533 aaPredicted RBP15.31■□□□□ 0.04
ZC3H4-201ENST00000253048 TAF1BQ53T94 588 aaPredicted RBP15.31■□□□□ 0.04
ZC3H4-201ENST00000253048 KIAA1468Q9P260 1216 aa15.31■□□□□ 0.04
ZC3H4-201ENST00000253048 CPSF2Q9P2I0 782 aaKnown RBP15.31■□□□□ 0.04
ZC3H4-201ENST00000253048 CTNND1O60716 968 aaKnown RBP15.31■□□□□ 0.04
ZC3H4-201ENST00000253048 RNASEH1O60930 286 aaKnown RBP15.31■□□□□ 0.04
ZC3H4-201ENST00000253048 DEFB128Q7Z7B8 93 aa15.31■□□□□ 0.04
ZC3H4-201ENST00000253048 LRRC43Q8N309 656 aa15.31■□□□□ 0.04
ZC3H4-201ENST00000253048 LINC00116Q8NCU8 138 aa15.31■□□□□ 0.04
ZC3H4-201ENST00000253048 OSBP2Q969R2 916 aa15.31■□□□□ 0.04
ZC3H4-201ENST00000253048 EIF4E1BA6NMX2 242 aaKnown RBP15.31■□□□□ 0.04
ZC3H4-201ENST00000253048 IPO5O00410 1097 aaKnown RBP15.31■□□□□ 0.04
ZC3H4-201ENST00000253048 ZNF197O14709 1029 aa15.31■□□□□ 0.04
ZC3H4-201ENST00000253048 SART1O43290 800 aaKnown RBP15.31■□□□□ 0.04
ZC3H4-201ENST00000253048 MYO1DO94832 1006 aa15.31■□□□□ 0.04
ZC3H4-201ENST00000253048 ZNF75DP51815 510 aa15.31■□□□□ 0.04
ZC3H4-201ENST00000253048 IRX4P78413 519 aa15.31■□□□□ 0.04
ZC3H4-201ENST00000253048 SMIM5Q71RC9 77 aa15.31■□□□□ 0.04
ZC3H4-201ENST00000253048 FOPNLQ96NB1 174 aa15.31■□□□□ 0.04
ZC3H4-201ENST00000253048 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.31■□□□□ 0.04
ZC3H4-201ENST00000253048 URODP06132 367 aa15.3■□□□□ 0.04
ZC3H4-201ENST00000253048 ZNF658Q5TYW1 1059 aaPredicted RBP15.3■□□□□ 0.04
ZC3H4-201ENST00000253048 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.3■□□□□ 0.04
ZC3H4-201ENST00000253048 AP3M2P53677 418 aa15.3■□□□□ 0.04
ZC3H4-201ENST00000253048 BAATQ14032 418 aaPredicted RBP15.3■□□□□ 0.04
ZC3H4-201ENST00000253048 KCNB1Q14721 858 aa15.3■□□□□ 0.04
ZC3H4-201ENST00000253048 FAM151AQ8WW52 585 aa15.3■□□□□ 0.04
ZC3H4-201ENST00000253048 SEPT1Q8WYJ6 367 aa15.3■□□□□ 0.04
ZC3H4-201ENST00000253048 MAGOHBQ96A72 148 aaKnown RBP15.3■□□□□ 0.04
ZC3H4-201ENST00000253048 TSR3Q9UJK0 312 aaKnown RBP15.3■□□□□ 0.04
ZC3H4-201ENST00000253048 SPATA31A5Q5VU36 1347 aa15.3■□□□□ 0.04
ZC3H4-201ENST00000253048 SPATA31A7Q8IWB4 1347 aa15.3■□□□□ 0.04
ZC3H4-201ENST00000253048 ZCCHC11Q5TAX3 1644 aaKnown RBP15.3■□□□□ 0.04
ZC3H4-201ENST00000253048 SRGAP2O75044 1071 aa15.3■□□□□ 0.04
ZC3H4-201ENST00000253048 RASSF2P50749 326 aa15.3■□□□□ 0.04
ZC3H4-201ENST00000253048 KPNA1P52294 538 aaPredicted RBP15.3■□□□□ 0.04
ZC3H4-201ENST00000253048 QRICH1Q2TAL8 776 aa15.3■□□□□ 0.04
ZC3H4-201ENST00000253048 FAF2Q96CS3 445 aa15.3■□□□□ 0.04
ZC3H4-201ENST00000253048 TEX12Q9BXU0 123 aa15.3■□□□□ 0.04
ZC3H4-201ENST00000253048 IGFLR1Q9H665 355 aa15.3■□□□□ 0.04
ZC3H4-201ENST00000253048 HOMER3Q9NSC5 361 aa15.3■□□□□ 0.04
ZC3H4-201ENST00000253048 FAM50BQ9Y247 325 aa15.3■□□□□ 0.04
ZC3H4-201ENST00000253048 PPP6R2O75170 966 aa15.3■□□□□ 0.04
ZC3H4-201ENST00000253048 TMEM270Q6UE05 265 aa15.3■□□□□ 0.04
ZC3H4-201ENST00000253048 TRIM42Q8IWZ5 723 aa15.3■□□□□ 0.04
ZC3H4-201ENST00000253048 XXYLT1Q8NBI6 393 aa15.3■□□□□ 0.04
ZC3H4-201ENST00000253048 KLC2Q9H0B6 622 aa15.3■□□□□ 0.04
ZC3H4-201ENST00000253048 CPA4Q9UI42 421 aa15.3■□□□□ 0.04
ZC3H4-201ENST00000253048 CALB1P05937 261 aa15.3■□□□□ 0.04
ZC3H4-201ENST00000253048 CUL1Q13616 776 aa15.3■□□□□ 0.04
ZC3H4-201ENST00000253048 SLC44A5Q8NCS7 719 aa15.3■□□□□ 0.04
ZC3H4-201ENST00000253048 GSDMAQ96QA5 445 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms