RNA–Protein interactions for RNA: ENST00000250559.13

RAP1B-201, Transcript of RAP1B, member of RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAP1B, Length 13,438 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-201ENST00000250559 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.06□□□□□ -1.6
RAP1B-201ENST00000250559 MSTO1Q9BUK6 570 aa5.06□□□□□ -1.6
RAP1B-201ENST00000250559 BCAR1P56945 870 aa5.06□□□□□ -1.6
RAP1B-201ENST00000250559 NBPF9Q3BBW0 867 aa5.06□□□□□ -1.6
RAP1B-201ENST00000250559 SDCCAG8Q86SQ7 713 aaPredicted RBP5.06□□□□□ -1.6
RAP1B-201ENST00000250559 MCUR1Q96AQ8 359 aa5.06□□□□□ -1.6
RAP1B-201ENST00000250559 YME1L1Q96TA2 773 aa5.06□□□□□ -1.6
RAP1B-201ENST00000250559 ZNF302Q9NR11 478 aa5.06□□□□□ -1.6
RAP1B-201ENST00000250559 STK17AQ9UEE5 414 aa5.06□□□□□ -1.6
RAP1B-201ENST00000250559 PGRMC1O00264 195 aaKnown RBP5.06□□□□□ -1.6
RAP1B-201ENST00000250559 AP5Z1O43299 807 aa5.06□□□□□ -1.6
RAP1B-201ENST00000250559 CD44P16070 742 aaKnown RBP5.06□□□□□ -1.6
RAP1B-201ENST00000250559 TPD52P55327 224 aaPredicted RBP5.06□□□□□ -1.6
RAP1B-201ENST00000250559 NME3Q13232 169 aa5.06□□□□□ -1.6
RAP1B-201ENST00000250559 ZNF568Q3ZCX4 644 aa5.06□□□□□ -1.6
RAP1B-201ENST00000250559 CDC42EP5Q6NZY7 148 aa5.06□□□□□ -1.6
RAP1B-201ENST00000250559 RGL4Q8IZJ4 473 aa5.06□□□□□ -1.6
RAP1B-201ENST00000250559 ATP6V0A1Q93050 837 aa5.06□□□□□ -1.6
RAP1B-201ENST00000250559 HOMER3Q9NSC5 361 aa5.06□□□□□ -1.6
RAP1B-201ENST00000250559 TSR3Q9UJK0 312 aaKnown RBP5.06□□□□□ -1.6
RAP1B-201ENST00000250559 HPS5Q9UPZ3 1129 aa5.06□□□□□ -1.6
RAP1B-201ENST00000250559 DAAM1Q9Y4D1 1078 aa5.06□□□□□ -1.6
RAP1B-201ENST00000250559 TXNDC9O14530 226 aa5.06□□□□□ -1.6
RAP1B-201ENST00000250559 EPHB4P54760 987 aa5.06□□□□□ -1.6
RAP1B-201ENST00000250559 DPYDQ12882 1025 aa5.06□□□□□ -1.6
RAP1B-201ENST00000250559 RSPH3Q86UC2 560 aa5.06□□□□□ -1.6
RAP1B-201ENST00000250559 TEX2Q8IWB9 1127 aa5.06□□□□□ -1.6
RAP1B-201ENST00000250559 GOLGA5Q8TBA6 731 aa5.06□□□□□ -1.6
RAP1B-201ENST00000250559 FAM71BQ8TC56 605 aa5.06□□□□□ -1.6
RAP1B-201ENST00000250559 DEPDC1BQ8WUY9 529 aa5.06□□□□□ -1.6
RAP1B-201ENST00000250559 C1orf54Q8WWF1 131 aa5.06□□□□□ -1.6
RAP1B-201ENST00000250559 MS4A14Q96JA4 679 aa5.06□□□□□ -1.6
RAP1B-201ENST00000250559 YIPF2Q9BWQ6 316 aa5.06□□□□□ -1.6
RAP1B-201ENST00000250559 MAGEF1Q9HAY2 307 aa5.06□□□□□ -1.6
RAP1B-201ENST00000250559 MTMR4Q9NYA4 1195 aa5.06□□□□□ -1.6
RAP1B-201ENST00000250559 DNAJC24Q6P3W2 148 aa5.06□□□□□ -1.6
RAP1B-201ENST00000250559 MIS12Q9H081 205 aa5.06□□□□□ -1.6
RAP1B-201ENST00000250559 TRPC7Q9HCX4 862 aa5.06□□□□□ -1.6
RAP1B-201ENST00000250559 RAB23Q9ULC3 237 aa5.06□□□□□ -1.6
RAP1B-201ENST00000250559 SPATA31D1Q6ZQQ2 1576 aa5.06□□□□□ -1.6
RAP1B-201ENST00000250559 KIF20BQ96Q89 1820 aa5.05□□□□□ -1.6
RAP1B-201ENST00000250559 STXBP3O00186 592 aa5.05□□□□□ -1.6
RAP1B-201ENST00000250559 RINT1Q6NUQ1 792 aa5.05□□□□□ -1.6
RAP1B-201ENST00000250559 SLC30A5Q8TAD4 765 aa5.05□□□□□ -1.6
RAP1B-201ENST00000250559 IQCDQ96DY2 449 aa5.05□□□□□ -1.6
RAP1B-201ENST00000250559 AGBL1Q96MI9 1066 aa5.05□□□□□ -1.6
RAP1B-201ENST00000250559 RNF19AQ9NV58 838 aa5.05□□□□□ -1.6
RAP1B-201ENST00000250559 STIM2Q9P246 746 aa5.05□□□□□ -1.6
RAP1B-201ENST00000250559 WEE1P30291 646 aa5.05□□□□□ -1.6
RAP1B-201ENST00000250559 JAK3P52333 1124 aa5.05□□□□□ -1.6
RAP1B-201ENST00000250559 SH3BP5O60239 455 aa5.05□□□□□ -1.6
RAP1B-201ENST00000250559 ARHGAP4P98171 946 aa5.05□□□□□ -1.6
RAP1B-201ENST00000250559 ORC1Q13415 861 aa5.05□□□□□ -1.6
RAP1B-201ENST00000250559 RGMBQ6NW40 437 aa5.05□□□□□ -1.6
RAP1B-201ENST00000250559 CCDC170Q8IYT3 715 aa5.05□□□□□ -1.6
RAP1B-201ENST00000250559 RBM46Q8TBY0 533 aaKnown RBP5.05□□□□□ -1.6
RAP1B-201ENST00000250559 OPTNQ96CV9 577 aa5.05□□□□□ -1.6
RAP1B-201ENST00000250559 SLC7A5P2Q9GIP4 190 aa5.05□□□□□ -1.6
RAP1B-201ENST00000250559 DEFB129Q9H1M3 183 aa5.05□□□□□ -1.6
RAP1B-201ENST00000250559 CD2APQ9Y5K6 639 aa5.05□□□□□ -1.6
RAP1B-201ENST00000250559 ADGRG1Q9Y653 693 aa5.05□□□□□ -1.6
RAP1B-201ENST00000250559 PNPLA7Q6ZV29 1317 aa5.05□□□□□ -1.6
RAP1B-201ENST00000250559 PEX10O60683 326 aa5.05□□□□□ -1.6
RAP1B-201ENST00000250559 TOMM70O94826 608 aa5.05□□□□□ -1.6
RAP1B-201ENST00000250559 ALDH3A1P30838 453 aa5.05□□□□□ -1.6
RAP1B-201ENST00000250559 PRELPP51888 382 aa5.05□□□□□ -1.6
RAP1B-201ENST00000250559 RSBN1LQ6PCB5 846 aaPredicted RBP5.05□□□□□ -1.6
RAP1B-201ENST00000250559 RRP15Q9Y3B9 282 aaKnown RBP5.05□□□□□ -1.6
RAP1B-201ENST00000250559 USP32Q8NFA0 1604 aa5.05□□□□□ -1.6
RAP1B-201ENST00000250559 KDM6AO15550 1401 aaPredicted RBP5.05□□□□□ -1.6
RAP1B-201ENST00000250559 TROVE2P10155 538 aaKnown RBP eCLIP5.05□□□□□ -1.6
RAP1B-201ENST00000250559 GPC3P51654 580 aa5.05□□□□□ -1.6
RAP1B-201ENST00000250559 YWHAEP62258 255 aaKnown RBP5.05□□□□□ -1.6
RAP1B-201ENST00000250559 DDX47Q9H0S4 455 aaKnown RBP5.05□□□□□ -1.6
RAP1B-201ENST00000250559 SNX25Q9H3E2 840 aa5.05□□□□□ -1.6
RAP1B-201ENST00000250559 TUBBP07437 444 aa5.05□□□□□ -1.6
RAP1B-201ENST00000250559 GNA15P30679 374 aa5.05□□□□□ -1.6
RAP1B-201ENST00000250559 LRRC63Q05C16 580 aa5.05□□□□□ -1.6
RAP1B-201ENST00000250559 EARS2Q5JPH6 523 aaKnown RBP5.05□□□□□ -1.6
RAP1B-201ENST00000250559 ZNF579Q8NAF0 562 aaKnown RBP5.05□□□□□ -1.6
RAP1B-201ENST00000250559 MCUQ8NE86 351 aa5.05□□□□□ -1.6
RAP1B-201ENST00000250559 LRRC8CQ8TDW0 803 aa5.05□□□□□ -1.6
RAP1B-201ENST00000250559 RABGGTAQ92696 567 aa5.05□□□□□ -1.6
RAP1B-201ENST00000250559 RPF1Q9H9Y2 349 aaKnown RBP5.05□□□□□ -1.6
RAP1B-201ENST00000250559 ZNF70Q9UC06 446 aaPredicted RBP5.05□□□□□ -1.6
RAP1B-201ENST00000250559 LDHAP00338 332 aaKnown RBP5.05□□□□□ -1.6
RAP1B-201ENST00000250559 NDUFV1P49821 464 aa5.05□□□□□ -1.6
RAP1B-201ENST00000250559 KNOP1Q1ED39 458 aaKnown RBP5.05□□□□□ -1.6
RAP1B-201ENST00000250559 BEND6Q5SZJ8 279 aaPredicted RBP5.05□□□□□ -1.6
RAP1B-201ENST00000250559 MKNK1Q9BUB5 465 aa5.05□□□□□ -1.6
RAP1B-201ENST00000250559 POLLQ9UGP5 575 aa5.05□□□□□ -1.6
RAP1B-201ENST00000250559 I3L4J1 428 aa5.05□□□□□ -1.6
RAP1B-201ENST00000250559 FGGP02679 453 aa5.05□□□□□ -1.6
RAP1B-201ENST00000250559 ASNSP08243 561 aa5.05□□□□□ -1.6
RAP1B-201ENST00000250559 GGCXP38435 758 aa5.05□□□□□ -1.6
RAP1B-201ENST00000250559 CASP2P42575 452 aa5.05□□□□□ -1.6
RAP1B-201ENST00000250559 CLCN6P51797 869 aa5.05□□□□□ -1.6
RAP1B-201ENST00000250559 OR6J1Q8NGC5 347 aa5.05□□□□□ -1.6
RAP1B-201ENST00000250559 ACSF2Q96CM8 615 aaPredicted RBP5.05□□□□□ -1.6
RAP1B-201ENST00000250559 SLC38A10Q9HBR0 1119 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms