RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 DDX19AQ9NUU7 478 aaKnown RBP27.06■■□□□ 1.92
SDF2L1-201ENST00000248958 RALGAPA2Q2PPJ7 1873 aa27.06■■□□□ 1.92
SDF2L1-201ENST00000248958 A0A087WWV3 80 aa27.05■■□□□ 1.92
SDF2L1-201ENST00000248958 ARHGEF15O94989 841 aa27.05■■□□□ 1.92
SDF2L1-201ENST00000248958 SRGAP2CP0DJJ0 459 aa27.05■■□□□ 1.92
SDF2L1-201ENST00000248958 PHKA2P46019 1235 aa27.05■■□□□ 1.92
SDF2L1-201ENST00000248958 FAM189BP81408 668 aa27.05■■□□□ 1.92
SDF2L1-201ENST00000248958 ECM1Q16610 540 aa27.05■■□□□ 1.92
SDF2L1-201ENST00000248958 PADI6Q6TGC4 694 aa27.05■■□□□ 1.92
SDF2L1-201ENST00000248958 FIBCD1Q8N539 461 aa27.05■■□□□ 1.92
SDF2L1-201ENST00000248958 RNF149Q8NC42 400 aa27.05■■□□□ 1.92
SDF2L1-201ENST00000248958 RC3H2Q9HBD1 1191 aaKnown RBP27.05■■□□□ 1.92
SDF2L1-201ENST00000248958 DNM3Q9UQ16 869 aa27.05■■□□□ 1.92
SDF2L1-201ENST00000248958 CYP11B2P19099 503 aa27.04■■□□□ 1.92
SDF2L1-201ENST00000248958 HYIQ5T013 277 aa27.04■■□□□ 1.92
SDF2L1-201ENST00000248958 CATSPER4Q7RTX7 472 aa27.04■■□□□ 1.92
SDF2L1-201ENST00000248958 ARNTL2Q8WYA1 636 aa27.04■■□□□ 1.92
SDF2L1-201ENST00000248958 TMEM161AQ9NX61 479 aa27.04■■□□□ 1.92
SDF2L1-201ENST00000248958 RWDD3Q9Y3V2 267 aa27.04■■□□□ 1.92
SDF2L1-201ENST00000248958 ADGRA3Q8IWK6 1321 aa27.04■■□□□ 1.92
SDF2L1-201ENST00000248958 NLRC5Q86WI3 1866 aa27.04■■□□□ 1.92
SDF2L1-201ENST00000248958 PP2D1A8MPX8 630 aa27.03■■□□□ 1.92
SDF2L1-201ENST00000248958 EYA4O95677 639 aa27.03■■□□□ 1.92
SDF2L1-201ENST00000248958 LONP1P36776 959 aaKnown RBP27.03■■□□□ 1.92
SDF2L1-201ENST00000248958 IFNLR1Q8IU57 520 aaPredicted RBP27.03■■□□□ 1.92
SDF2L1-201ENST00000248958 CMTR2Q8IYT2 770 aaKnown RBP27.03■■□□□ 1.92
SDF2L1-201ENST00000248958 MMTAG2Q9BU76 263 aaKnown RBP27.03■■□□□ 1.92
SDF2L1-201ENST00000248958 NFKBIZQ9BYH8 718 aa27.03■■□□□ 1.92
SDF2L1-201ENST00000248958 POLR3FQ9H1D9 316 aaPredicted RBP27.03■■□□□ 1.92
SDF2L1-201ENST00000248958 BHMT2Q9H2M3 363 aa27.03■■□□□ 1.92
SDF2L1-201ENST00000248958 CERS4Q9HA82 394 aa27.03■■□□□ 1.92
SDF2L1-201ENST00000248958 MYO9BQ13459 2157 aa27.02■■□□□ 1.92
SDF2L1-201ENST00000248958 MYH15Q9Y2K3 1946 aa27.02■■□□□ 1.92
SDF2L1-201ENST00000248958 HOXA2O43364 376 aa27.02■■□□□ 1.92
SDF2L1-201ENST00000248958 SKIP12755 728 aa27.02■■□□□ 1.92
SDF2L1-201ENST00000248958 FGFR4P22455 802 aa27.02■■□□□ 1.92
SDF2L1-201ENST00000248958 CDC25AP30304 524 aa27.02■■□□□ 1.92
SDF2L1-201ENST00000248958 PTENP60484 403 aa27.02■■□□□ 1.92
SDF2L1-201ENST00000248958 BTG3Q14201 252 aaPredicted RBP27.02■■□□□ 1.92
SDF2L1-201ENST00000248958 CDK5RAP3Q96JB5 506 aa27.02■■□□□ 1.92
SDF2L1-201ENST00000248958 TRAIPQ9BWF2 469 aa27.02■■□□□ 1.92
SDF2L1-201ENST00000248958 CSDE1O75534 798 aaKnown RBP27.01■■□□□ 1.91
SDF2L1-201ENST00000248958 GLRA2P23416 452 aa27.01■■□□□ 1.91
SDF2L1-201ENST00000248958 SLC17A8Q8NDX2 589 aa27.01■■□□□ 1.91
SDF2L1-201ENST00000248958 MORC2Q9Y6X9 1032 aaPredicted RBP27.01■■□□□ 1.91
SDF2L1-201ENST00000248958 FNDC1Q4ZHG4 1894 aaPredicted RBP27■■□□□ 1.91
SDF2L1-201ENST00000248958 A0A0U1RQF3 1178 aa27■■□□□ 1.91
SDF2L1-201ENST00000248958 EOMESO95936 686 aa27■■□□□ 1.91
SDF2L1-201ENST00000248958 POU3F3P20264 500 aaPredicted RBP27■■□□□ 1.91
SDF2L1-201ENST00000248958 UBA7P41226 1012 aa27■■□□□ 1.91
SDF2L1-201ENST00000248958 CAPSQ13938 189 aa27■■□□□ 1.91
SDF2L1-201ENST00000248958 PTPAQ15257 358 aa27■■□□□ 1.91
SDF2L1-201ENST00000248958 FAM102BQ5T8I3 360 aa27■■□□□ 1.91
SDF2L1-201ENST00000248958 CABP7Q86V35 215 aa27■■□□□ 1.91
SDF2L1-201ENST00000248958 ASAP3Q8TDY4 903 aa27■■□□□ 1.91
SDF2L1-201ENST00000248958 AGPAT5Q9NUQ2 364 aa27■■□□□ 1.91
SDF2L1-201ENST00000248958 PIN4Q9Y237 131 aaKnown RBP27■■□□□ 1.91
SDF2L1-201ENST00000248958 CLIC4Q9Y696 253 aa27■■□□□ 1.91
SDF2L1-201ENST00000248958 E9PMD0 336 aa26.99■■□□□ 1.91
SDF2L1-201ENST00000248958 GTPBP6O43824 516 aaPredicted RBP26.99■■□□□ 1.91
SDF2L1-201ENST00000248958 ERLIN2O94905 339 aa26.99■■□□□ 1.91
SDF2L1-201ENST00000248958 IGFBP4P22692 258 aa26.99■■□□□ 1.91
SDF2L1-201ENST00000248958 AXLP30530 894 aa26.99■■□□□ 1.91
SDF2L1-201ENST00000248958 RAB27AP51159 221 aa26.99■■□□□ 1.91
SDF2L1-201ENST00000248958 NCBP1Q09161 790 aaKnown RBP26.99■■□□□ 1.91
SDF2L1-201ENST00000248958 PPP2R5AQ15172 486 aa26.99■■□□□ 1.91
SDF2L1-201ENST00000248958 TWF2Q6IBS0 349 aaKnown RBP26.99■■□□□ 1.91
SDF2L1-201ENST00000248958 MAEAQ7L5Y9 396 aa26.99■■□□□ 1.91
SDF2L1-201ENST00000248958 ECHDC2Q86YB7 292 aa26.99■■□□□ 1.91
SDF2L1-201ENST00000248958 FBXO22Q8NEZ5 403 aa26.99■■□□□ 1.91
SDF2L1-201ENST00000248958 MAFAQ8NHW3 353 aaPredicted RBP26.99■■□□□ 1.91
SDF2L1-201ENST00000248958 KIFAP3Q92845 792 aa26.99■■□□□ 1.91
SDF2L1-201ENST00000248958 CALML4Q96GE6 196 aa26.99■■□□□ 1.91
SDF2L1-201ENST00000248958 LMCD1Q9NZU5 365 aa26.99■■□□□ 1.91
SDF2L1-201ENST00000248958 RB1P06400 928 aa26.98■■□□□ 1.91
SDF2L1-201ENST00000248958 ADGRE1Q14246 886 aa26.98■■□□□ 1.91
SDF2L1-201ENST00000248958 EPC2Q52LR7 807 aa26.98■■□□□ 1.91
SDF2L1-201ENST00000248958 FAM173BQ6P4H8 233 aa26.98■■□□□ 1.91
SDF2L1-201ENST00000248958 TMEM192Q8IY95 271 aa26.98■■□□□ 1.91
SDF2L1-201ENST00000248958 RSPH1Q8WYR4 309 aa26.98■■□□□ 1.91
SDF2L1-201ENST00000248958 CLP1Q92989 425 aaKnown RBP26.98■■□□□ 1.91
SDF2L1-201ENST00000248958 C17orf80Q9BSJ5 609 aa26.98■■□□□ 1.91
SDF2L1-201ENST00000248958 MINDY3Q9H8M7 445 aa26.98■■□□□ 1.91
SDF2L1-201ENST00000248958 GPRC5CQ9NQ84 441 aa26.98■■□□□ 1.91
SDF2L1-201ENST00000248958 MTUS1Q9ULD2 1270 aa26.98■■□□□ 1.91
SDF2L1-201ENST00000248958 COL4A4P53420 1690 aaPredicted RBP26.98■■□□□ 1.91
SDF2L1-201ENST00000248958 EPOPA6NHQ4 379 aa26.97■■□□□ 1.91
SDF2L1-201ENST00000248958 IBSPP21815 317 aaPredicted RBP26.97■■□□□ 1.91
SDF2L1-201ENST00000248958 ZRSR1Q15695 479 aaKnown RBP26.97■■□□□ 1.91
SDF2L1-201ENST00000248958 SPRED2Q7Z698 418 aa26.97■■□□□ 1.91
SDF2L1-201ENST00000248958 ZBTB8OSQ8IWT0 167 aa26.97■■□□□ 1.91
SDF2L1-201ENST00000248958 ZNF396Q96N95 335 aaPredicted RBP26.97■■□□□ 1.91
SDF2L1-201ENST00000248958 PNMA5Q96PV4 448 aa26.97■■□□□ 1.91
SDF2L1-201ENST00000248958 TIPINQ9BVW5 301 aa26.97■■□□□ 1.91
SDF2L1-201ENST00000248958 C2orf40Q9H1Z8 148 aa26.97■■□□□ 1.91
SDF2L1-201ENST00000248958 INO80B-WBP1J3KQ70 363 aa26.96■■□□□ 1.91
SDF2L1-201ENST00000248958 RFXAPO00287 272 aa26.96■■□□□ 1.91
SDF2L1-201ENST00000248958 NAMPTP43490 491 aa26.96■■□□□ 1.91
SDF2L1-201ENST00000248958 GRB10Q13322 594 aa26.96■■□□□ 1.91
SDF2L1-201ENST00000248958 TMEM119Q4V9L6 283 aa26.96■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms