RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 KRT79Q5XKE5 535 aa14.21□□□□□ -0.13
VPREB3-201ENST00000248948 IFNLR1Q8IU57 520 aaPredicted RBP14.21□□□□□ -0.13
VPREB3-201ENST00000248948 FIBCD1Q8N539 461 aa14.21□□□□□ -0.13
VPREB3-201ENST00000248948 KCTD17Q8N5Z5 321 aa14.21□□□□□ -0.13
VPREB3-201ENST00000248948 PIGOQ8TEQ8 1089 aa14.21□□□□□ -0.13
VPREB3-201ENST00000248948 PRPF31Q8WWY3 499 aaKnown RBP14.21□□□□□ -0.13
VPREB3-201ENST00000248948 RSPH1Q8WYR4 309 aa14.21□□□□□ -0.13
VPREB3-201ENST00000248948 TMEM143Q96AN5 459 aa14.21□□□□□ -0.13
VPREB3-201ENST00000248948 TRAIPQ9BWF2 469 aa14.21□□□□□ -0.13
VPREB3-201ENST00000248948 NFKBIZQ9BYH8 718 aa14.21□□□□□ -0.13
VPREB3-201ENST00000248948 IFT122Q9HBG6 1241 aa14.21□□□□□ -0.13
VPREB3-201ENST00000248948 BMP2KQ9NSY1 1161 aaPredicted RBP14.21□□□□□ -0.13
VPREB3-201ENST00000248948 LRFN2Q9ULH4 789 aa14.21□□□□□ -0.13
VPREB3-201ENST00000248948 ARHGEF35A5YM69 484 aa14.2□□□□□ -0.14
VPREB3-201ENST00000248948 C5orf67F2Z3F1 127 aa14.2□□□□□ -0.14
VPREB3-201ENST00000248948 HOXA2O43364 376 aa14.2□□□□□ -0.14
VPREB3-201ENST00000248948 SLC26A4O43511 780 aa14.2□□□□□ -0.14
VPREB3-201ENST00000248948 GTPBP6O43824 516 aaPredicted RBP14.2□□□□□ -0.14
VPREB3-201ENST00000248948 USO1O60763 962 aaKnown RBP14.2□□□□□ -0.14
VPREB3-201ENST00000248948 PDIA4P13667 645 aaKnown RBP14.2□□□□□ -0.14
VPREB3-201ENST00000248948 ARL2P36404 184 aa14.2□□□□□ -0.14
VPREB3-201ENST00000248948 RESTQ13127 1097 aa14.2□□□□□ -0.14
VPREB3-201ENST00000248948 BTG3Q14201 252 aaPredicted RBP14.2□□□□□ -0.14
VPREB3-201ENST00000248948 SPRED2Q7Z698 418 aa14.2□□□□□ -0.14
VPREB3-201ENST00000248948 KSR1Q8IVT5 923 aa14.2□□□□□ -0.14
VPREB3-201ENST00000248948 FBXO22Q8NEZ5 403 aa14.2□□□□□ -0.14
VPREB3-201ENST00000248948 CLP1Q92989 425 aaKnown RBP14.2□□□□□ -0.14
VPREB3-201ENST00000248948 ZNF668Q96K58 619 aaPredicted RBP14.2□□□□□ -0.14
VPREB3-201ENST00000248948 AK8Q96MA6 479 aa14.2□□□□□ -0.14
VPREB3-201ENST00000248948 C17orf80Q9BSJ5 609 aa14.2□□□□□ -0.14
VPREB3-201ENST00000248948 CERS4Q9HA82 394 aa14.2□□□□□ -0.14
VPREB3-201ENST00000248948 AGPAT5Q9NUQ2 364 aa14.2□□□□□ -0.14
VPREB3-201ENST00000248948 LMCD1Q9NZU5 365 aa14.2□□□□□ -0.14
VPREB3-201ENST00000248948 PCDHB7Q9Y5E2 793 aa14.2□□□□□ -0.14
VPREB3-201ENST00000248948 UNC80Q8N2C7 3258 aa14.2□□□□□ -0.14
VPREB3-201ENST00000248948 PRUNE2Q8WUY3 3088 aa14.2□□□□□ -0.14
VPREB3-201ENST00000248948 REV3LO60673 3130 aa14.19□□□□□ -0.14
VPREB3-201ENST00000248948 LPXNO60711 386 aa14.19□□□□□ -0.14
VPREB3-201ENST00000248948 LINC00271P0C7V0 271 aa14.19□□□□□ -0.14
VPREB3-201ENST00000248948 SKIP12755 728 aa14.19□□□□□ -0.14
VPREB3-201ENST00000248948 RAB27AP51159 221 aa14.19□□□□□ -0.14
VPREB3-201ENST00000248948 FAM189BP81408 668 aa14.19□□□□□ -0.14
VPREB3-201ENST00000248948 GRB10Q13322 594 aa14.19□□□□□ -0.14
VPREB3-201ENST00000248948 CAPSQ13938 189 aa14.19□□□□□ -0.14
VPREB3-201ENST00000248948 IL17AQ16552 155 aa14.19□□□□□ -0.14
VPREB3-201ENST00000248948 EPC2Q52LR7 807 aa14.19□□□□□ -0.14
VPREB3-201ENST00000248948 HYIQ5T013 277 aa14.19□□□□□ -0.14
VPREB3-201ENST00000248948 CATSPER4Q7RTX7 472 aa14.19□□□□□ -0.14
VPREB3-201ENST00000248948 RNF149Q8NC42 400 aa14.19□□□□□ -0.14
VPREB3-201ENST00000248948 GDPD5Q8WTR4 605 aa14.19□□□□□ -0.14
VPREB3-201ENST00000248948 POLR3FQ9H1D9 316 aaPredicted RBP14.19□□□□□ -0.14
VPREB3-201ENST00000248948 DDX19AQ9NUU7 478 aaKnown RBP14.19□□□□□ -0.14
VPREB3-201ENST00000248948 MTUS1Q9ULD2 1270 aa14.19□□□□□ -0.14
VPREB3-201ENST00000248948 MTMR6Q9Y217 621 aa14.19□□□□□ -0.14
VPREB3-201ENST00000248948 PIN4Q9Y237 131 aaKnown RBP14.19□□□□□ -0.14
VPREB3-201ENST00000248948 TDRD15B5MCY1 1934 aaKnown RBP14.19□□□□□ -0.14
VPREB3-201ENST00000248948 A0A0U1RQF3 1178 aa14.18□□□□□ -0.14
VPREB3-201ENST00000248948 VWA3AA6NCI4 1184 aa14.18□□□□□ -0.14
VPREB3-201ENST00000248948 STX6O43752 255 aa14.18□□□□□ -0.14
VPREB3-201ENST00000248948 RB1P06400 928 aa14.18□□□□□ -0.14
VPREB3-201ENST00000248948 FGFR4P22455 802 aa14.18□□□□□ -0.14
VPREB3-201ENST00000248948 IGFBP4P22692 258 aa14.18□□□□□ -0.14
VPREB3-201ENST00000248948 GLRA2P23416 452 aa14.18□□□□□ -0.14
VPREB3-201ENST00000248948 CTNNB1P35222 781 aa14.18□□□□□ -0.14
VPREB3-201ENST00000248948 PTENP60484 403 aa14.18□□□□□ -0.14
VPREB3-201ENST00000248948 ECM1Q16610 540 aa14.18□□□□□ -0.14
VPREB3-201ENST00000248948 PADI6Q6TGC4 694 aa14.18□□□□□ -0.14
VPREB3-201ENST00000248948 ECHDC2Q86YB7 292 aa14.18□□□□□ -0.14
VPREB3-201ENST00000248948 TMEM192Q8IY95 271 aa14.18□□□□□ -0.14
VPREB3-201ENST00000248948 ASAP3Q8TDY4 903 aa14.18□□□□□ -0.14
VPREB3-201ENST00000248948 C11orf84Q9BUA3 381 aaPredicted RBP14.18□□□□□ -0.14
VPREB3-201ENST00000248948 PLVAPQ9BX97 442 aa14.18□□□□□ -0.14
VPREB3-201ENST00000248948 NT5C3AQ9H0P0 336 aa14.18□□□□□ -0.14
VPREB3-201ENST00000248948 BHMT2Q9H2M3 363 aa14.18□□□□□ -0.14
VPREB3-201ENST00000248948 ZSCAN16Q9H4T2 348 aaPredicted RBP14.18□□□□□ -0.14
VPREB3-201ENST00000248948 KIAA1024Q9UPX6 916 aa14.18□□□□□ -0.14
VPREB3-201ENST00000248948 MTCH2Q9Y6C9 303 aa14.18□□□□□ -0.14
VPREB3-201ENST00000248948 MORC2Q9Y6X9 1032 aaPredicted RBP14.18□□□□□ -0.14
VPREB3-201ENST00000248948 PP2D1A8MPX8 630 aa14.17□□□□□ -0.14
VPREB3-201ENST00000248948 ERLIN2O94905 339 aa14.17□□□□□ -0.14
VPREB3-201ENST00000248948 EYA4O95677 639 aa14.17□□□□□ -0.14
VPREB3-201ENST00000248948 EOMESO95936 686 aa14.17□□□□□ -0.14
VPREB3-201ENST00000248948 HSP90AA1P07900 732 aaKnown RBP14.17□□□□□ -0.14
VPREB3-201ENST00000248948 SRGAP2CP0DJJ0 459 aa14.17□□□□□ -0.14
VPREB3-201ENST00000248948 CYP11B2P19099 503 aa14.17□□□□□ -0.14
VPREB3-201ENST00000248948 AXLP30530 894 aa14.17□□□□□ -0.14
VPREB3-201ENST00000248948 CDCA2Q69YH5 1023 aaPredicted RBP14.17□□□□□ -0.14
VPREB3-201ENST00000248948 TWF2Q6IBS0 349 aaKnown RBP14.17□□□□□ -0.14
VPREB3-201ENST00000248948 LRRC43Q8N309 656 aa14.17□□□□□ -0.14
VPREB3-201ENST00000248948 P2RX5Q93086 422 aa14.17□□□□□ -0.14
VPREB3-201ENST00000248948 CCDC51Q96ER9 411 aa14.17□□□□□ -0.14
VPREB3-201ENST00000248948 MMTAG2Q9BU76 263 aaKnown RBP14.17□□□□□ -0.14
VPREB3-201ENST00000248948 TMEM117Q9H0C3 514 aa14.17□□□□□ -0.14
VPREB3-201ENST00000248948 MRPL42Q9Y6G3 142 aaKnown RBP14.17□□□□□ -0.14
VPREB3-201ENST00000248948 H3BNC9 293 aa14.16□□□□□ -0.14
VPREB3-201ENST00000248948 RFXAPO00287 272 aa14.16□□□□□ -0.14
VPREB3-201ENST00000248948 TSPAN1O60635 241 aa14.16□□□□□ -0.14
VPREB3-201ENST00000248948 CSDE1O75534 798 aaKnown RBP14.16□□□□□ -0.14
VPREB3-201ENST00000248948 FGFR1P11362 822 aa14.16□□□□□ -0.14
VPREB3-201ENST00000248948 ATF7P17544 494 aaPredicted RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms