RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 AOC2O75106 756 aa25.57■■□□□ 1.68
SYNGR3-201ENST00000248121 EPB41P11171 864 aaKnown RBP25.57■■□□□ 1.68
SYNGR3-201ENST00000248121 CTGFP29279 349 aa25.57■■□□□ 1.68
SYNGR3-201ENST00000248121 SOX10P56693 466 aa25.57■■□□□ 1.68
SYNGR3-201ENST00000248121 METTL7BQ6UX53 244 aa25.57■■□□□ 1.68
SYNGR3-201ENST00000248121 ATP6V0A1Q93050 837 aa25.57■■□□□ 1.68
SYNGR3-201ENST00000248121 METTL14Q9HCE5 456 aaKnown RBP25.57■■□□□ 1.68
SYNGR3-201ENST00000248121 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.57■■□□□ 1.68
SYNGR3-201ENST00000248121 CEP72Q9P209 647 aa25.57■■□□□ 1.68
SYNGR3-201ENST00000248121 TRIM10Q9UDY6 481 aa25.57■■□□□ 1.68
SYNGR3-201ENST00000248121 TFR2Q9UP52 801 aa25.57■■□□□ 1.68
SYNGR3-201ENST00000248121 IGKV6D-21A0A0A0MT36 114 aa25.57■■□□□ 1.68
SYNGR3-201ENST00000248121 URI1O94763 535 aaPredicted RBP25.57■■□□□ 1.68
SYNGR3-201ENST00000248121 SLU7O95391 586 aaKnown RBP25.57■■□□□ 1.68
SYNGR3-201ENST00000248121 AFPP02771 609 aaKnown RBP25.57■■□□□ 1.68
SYNGR3-201ENST00000248121 MAPTP10636 758 aaKnown RBP25.57■■□□□ 1.68
SYNGR3-201ENST00000248121 XRCC5P13010 732 aaKnown RBP25.57■■□□□ 1.68
SYNGR3-201ENST00000248121 NCBP1Q09161 790 aaKnown RBP25.57■■□□□ 1.68
SYNGR3-201ENST00000248121 CELF3Q5SZQ8 465 aaKnown RBP25.57■■□□□ 1.68
SYNGR3-201ENST00000248121 MAMDC4Q6UXC1 1216 aa25.57■■□□□ 1.68
SYNGR3-201ENST00000248121 TRIM50Q86XT4 487 aa25.57■■□□□ 1.68
SYNGR3-201ENST00000248121 GPIHBP1Q8IV16 184 aa25.57■■□□□ 1.68
SYNGR3-201ENST00000248121 GANQ9H2C0 597 aa25.57■■□□□ 1.68
SYNGR3-201ENST00000248121 MLXIPQ9HAP2 919 aa25.57■■□□□ 1.68
SYNGR3-201ENST00000248121 NLRC4Q9NPP4 1024 aa25.57■■□□□ 1.68
SYNGR3-201ENST00000248121 ZNF302Q9NR11 478 aa25.57■■□□□ 1.68
SYNGR3-201ENST00000248121 SEPT9Q9UHD8 586 aaPredicted RBP25.57■■□□□ 1.68
SYNGR3-201ENST00000248121 C11orf97A0A1B0GVM6 126 aaPredicted RBP25.56■■□□□ 1.68
SYNGR3-201ENST00000248121 EIF3CLB5ME19 914 aaKnown RBP25.56■■□□□ 1.68
SYNGR3-201ENST00000248121 ZNF263O14978 683 aa25.56■■□□□ 1.68
SYNGR3-201ENST00000248121 TXNP10599 105 aaKnown RBP25.56■■□□□ 1.68
SYNGR3-201ENST00000248121 CYLC1P35663 651 aaPredicted RBP25.56■■□□□ 1.68
SYNGR3-201ENST00000248121 TCF7P36402 384 aaPredicted RBP25.56■■□□□ 1.68
SYNGR3-201ENST00000248121 PPP2R3AQ06190 1150 aa25.56■■□□□ 1.68
SYNGR3-201ENST00000248121 CCDC43Q96MW1 224 aaKnown RBP25.56■■□□□ 1.68
SYNGR3-201ENST00000248121 EIF3CQ99613 913 aaKnown RBP25.56■■□□□ 1.68
SYNGR3-201ENST00000248121 MAFBQ9Y5Q3 323 aaPredicted RBP25.56■■□□□ 1.68
SYNGR3-201ENST00000248121 KIF5CO60282 957 aa25.56■■□□□ 1.68
SYNGR3-201ENST00000248121 INHBEP58166 350 aa25.56■■□□□ 1.68
SYNGR3-201ENST00000248121 SREBF2Q12772 1141 aa25.56■■□□□ 1.68
SYNGR3-201ENST00000248121 DCAF17Q5H9S7 520 aaPredicted RBP25.56■■□□□ 1.68
SYNGR3-201ENST00000248121 MORN1Q5T089 497 aa25.56■■□□□ 1.68
SYNGR3-201ENST00000248121 HS2ST1Q7LGA3 356 aa25.56■■□□□ 1.68
SYNGR3-201ENST00000248121 CACNA2D4Q7Z3S7 1137 aa25.56■■□□□ 1.68
SYNGR3-201ENST00000248121 RCCD1A6NED2 376 aa25.55■■□□□ 1.68
SYNGR3-201ENST00000248121 ADCYAP1R1P41586 468 aa25.55■■□□□ 1.68
SYNGR3-201ENST00000248121 TM4SF4P48230 202 aa25.55■■□□□ 1.68
SYNGR3-201ENST00000248121 POLR2FP61218 127 aaKnown RBP25.55■■□□□ 1.68
SYNGR3-201ENST00000248121 CEP170P1Q96L14 293 aa25.55■■□□□ 1.68
SYNGR3-201ENST00000248121 GPR20Q99678 358 aa25.55■■□□□ 1.68
SYNGR3-201ENST00000248121 TIPINQ9BVW5 301 aa25.55■■□□□ 1.68
SYNGR3-201ENST00000248121 FLRT1Q9NZU1 646 aa25.55■■□□□ 1.68
SYNGR3-201ENST00000248121 LOC102724159A0A0B4J2E5 919 aa25.54■■□□□ 1.68
SYNGR3-201ENST00000248121 SLC15A5A6NIM6 579 aa25.54■■□□□ 1.68
SYNGR3-201ENST00000248121 SLC9A1P19634 815 aa25.54■■□□□ 1.68
SYNGR3-201ENST00000248121 PSMC2P35998 433 aaKnown RBP25.54■■□□□ 1.68
SYNGR3-201ENST00000248121 PWP2Q15269 919 aaKnown RBP25.54■■□□□ 1.68
SYNGR3-201ENST00000248121 ZNF569Q5MCW4 686 aa25.54■■□□□ 1.68
SYNGR3-201ENST00000248121 HGSNATQ68CP4 663 aa25.54■■□□□ 1.68
SYNGR3-201ENST00000248121 FAM186BQ8IYM0 893 aa25.54■■□□□ 1.68
SYNGR3-201ENST00000248121 HHIPL1Q96JK4 782 aa25.54■■□□□ 1.68
SYNGR3-201ENST00000248121 MKNK1Q9BUB5 465 aa25.54■■□□□ 1.68
SYNGR3-201ENST00000248121 ZFYVE28Q9HCC9 887 aa25.54■■□□□ 1.68
SYNGR3-201ENST00000248121 ACTN1P12814 892 aa25.54■■□□□ 1.68
SYNGR3-201ENST00000248121 CYP27A1Q02318 531 aa25.54■■□□□ 1.68
SYNGR3-201ENST00000248121 ZNF467Q7Z7K2 595 aaPredicted RBP25.54■■□□□ 1.68
SYNGR3-201ENST00000248121 ERO1AQ96HE7 468 aa25.54■■□□□ 1.68
SYNGR3-201ENST00000248121 DRC1Q96MC2 740 aa25.54■■□□□ 1.68
SYNGR3-201ENST00000248121 TISP43B9A030 160 aa25.53■■□□□ 1.68
SYNGR3-201ENST00000248121 CYP2J2P51589 502 aa25.53■■□□□ 1.68
SYNGR3-201ENST00000248121 KRT83P78385 493 aa25.53■■□□□ 1.68
SYNGR3-201ENST00000248121 GTF2BQ00403 316 aa25.53■■□□□ 1.68
SYNGR3-201ENST00000248121 TCERG1LQ5VWI1 586 aa25.53■■□□□ 1.68
SYNGR3-201ENST00000248121 ZNF662Q6ZS27 426 aa25.53■■□□□ 1.68
SYNGR3-201ENST00000248121 SLC9A9Q8IVB4 645 aa25.53■■□□□ 1.68
SYNGR3-201ENST00000248121 SCFD2Q8WU76 684 aa25.53■■□□□ 1.68
SYNGR3-201ENST00000248121 ANKRD7Q92527 254 aa25.53■■□□□ 1.68
SYNGR3-201ENST00000248121 CCDC42Q96M95 316 aa25.53■■□□□ 1.68
SYNGR3-201ENST00000248121 ST6GALNAC4Q9H4F1 302 aa25.53■■□□□ 1.68
SYNGR3-201ENST00000248121 ADCY6O43306 1168 aa25.52■■□□□ 1.68
SYNGR3-201ENST00000248121 PON1P27169 355 aa25.52■■□□□ 1.68
SYNGR3-201ENST00000248121 EIF4A3P38919 411 aaKnown RBP25.52■■□□□ 1.68
SYNGR3-201ENST00000248121 PEX3P56589 373 aa25.52■■□□□ 1.68
SYNGR3-201ENST00000248121 TTLL4Q14679 1199 aa25.52■■□□□ 1.68
SYNGR3-201ENST00000248121 CCL14Q16627 93 aa25.52■■□□□ 1.68
SYNGR3-201ENST00000248121 MTERF2Q49AM1 385 aa25.52■■□□□ 1.68
SYNGR3-201ENST00000248121 FAM102BQ5T8I3 360 aa25.52■■□□□ 1.68
SYNGR3-201ENST00000248121 HAUS6Q7Z4H7 955 aa25.52■■□□□ 1.68
SYNGR3-201ENST00000248121 DHX37Q8IY37 1157 aaKnown RBP25.52■■□□□ 1.68
SYNGR3-201ENST00000248121 SYCP3Q8IZU3 236 aa25.52■■□□□ 1.68
SYNGR3-201ENST00000248121 SLC35F6Q8N357 371 aa25.52■■□□□ 1.68
SYNGR3-201ENST00000248121 SEPT1Q8WYJ6 367 aa25.52■■□□□ 1.68
SYNGR3-201ENST00000248121 SPATA33Q96N06 139 aa25.52■■□□□ 1.68
SYNGR3-201ENST00000248121 TINF2Q9BSI4 451 aa25.52■■□□□ 1.68
SYNGR3-201ENST00000248121 LACRTQ9GZZ8 138 aa25.52■■□□□ 1.68
SYNGR3-201ENST00000248121 HAUS4Q9H6D7 363 aa25.52■■□□□ 1.68
SYNGR3-201ENST00000248121 XPNPEP1Q9NQW7 623 aa25.52■■□□□ 1.68
SYNGR3-201ENST00000248121 NOL12Q9UGY1 213 aaKnown RBP eCLIP25.52■■□□□ 1.68
SYNGR3-201ENST00000248121 DIS3Q9Y2L1 958 aaKnown RBP25.52■■□□□ 1.68
SYNGR3-201ENST00000248121 V9GYY5 206 aaPredicted RBP25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms