RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 PTPRMP28827 1452 aa21.24■□□□□ 0.99
SOX4-201ENST00000244745 HP1BP3Q5SSJ5 553 aaPredicted RBP21.24■□□□□ 0.99
SOX4-201ENST00000244745 ADSSL1Q8N142 457 aa21.24■□□□□ 0.99
SOX4-201ENST00000244745 SH2D3CQ8N5H7 860 aa21.24■□□□□ 0.99
SOX4-201ENST00000244745 TGS1Q96RS0 853 aaKnown RBP21.24■□□□□ 0.99
SOX4-201ENST00000244745 SNX25Q9H3E2 840 aa21.24■□□□□ 0.99
SOX4-201ENST00000244745 TTC7AQ9ULT0 858 aaPredicted RBP21.24■□□□□ 0.99
SOX4-201ENST00000244745 ZBED1O96006 694 aa21.23■□□□□ 0.99
SOX4-201ENST00000244745 CASP2P42575 452 aa21.23■□□□□ 0.99
SOX4-201ENST00000244745 SMARCAL1Q9NZC9 954 aa21.23■□□□□ 0.99
SOX4-201ENST00000244745 IPO11Q9UI26 975 aaKnown RBP21.23■□□□□ 0.99
SOX4-201ENST00000244745 BCS1LQ9Y276 419 aa21.23■□□□□ 0.99
SOX4-201ENST00000244745 TTC4O95801 387 aa21.23■□□□□ 0.99
SOX4-201ENST00000244745 SRGAP2BP0DMP2 458 aa21.23■□□□□ 0.99
SOX4-201ENST00000244745 RANBP1P43487 201 aa21.23■□□□□ 0.99
SOX4-201ENST00000244745 VAMP7P51809 220 aa21.23■□□□□ 0.99
SOX4-201ENST00000244745 ZNF394Q53GI3 561 aa21.23■□□□□ 0.99
SOX4-201ENST00000244745 FAM47CQ5HY64 1035 aa21.23■□□□□ 0.99
SOX4-201ENST00000244745 GLYCTKQ8IVS8 523 aa21.23■□□□□ 0.99
SOX4-201ENST00000244745 PPWD1Q96BP3 646 aaKnown RBP21.23■□□□□ 0.99
SOX4-201ENST00000244745 SPATA31A3Q5VYP0 1347 aa21.23■□□□□ 0.99
SOX4-201ENST00000244745 PALM3A6NDB9 673 aaPredicted RBP21.23■□□□□ 0.99
SOX4-201ENST00000244745 OATP04181 439 aa21.23■□□□□ 0.99
SOX4-201ENST00000244745 CHRNA3P32297 505 aa21.23■□□□□ 0.99
SOX4-201ENST00000244745 DYNC1I2Q13409 638 aaKnown RBP21.23■□□□□ 0.99
SOX4-201ENST00000244745 GRAMD1BQ3KR37 738 aa21.23■□□□□ 0.99
SOX4-201ENST00000244745 XXYLT1Q8NBI6 393 aa21.23■□□□□ 0.99
SOX4-201ENST00000244745 SH3GL3Q99963 347 aa21.23■□□□□ 0.99
SOX4-201ENST00000244745 IQGAP1P46940 1657 aa21.23■□□□□ 0.99
SOX4-201ENST00000244745 DLC1Q96QB1 1528 aa21.23■□□□□ 0.99
SOX4-201ENST00000244745 SRGAP2CP0DJJ0 459 aa21.23■□□□□ 0.99
SOX4-201ENST00000244745 KLK7P49862 253 aa21.23■□□□□ 0.99
SOX4-201ENST00000244745 MUM1L1Q5H9M0 696 aa21.23■□□□□ 0.99
SOX4-201ENST00000244745 CEP70Q8NHQ1 597 aa21.23■□□□□ 0.99
SOX4-201ENST00000244745 CPS1P31327 1500 aa21.23■□□□□ 0.99
SOX4-201ENST00000244745 RAD23BP54727 409 aa21.22■□□□□ 0.99
SOX4-201ENST00000244745 CCDC137Q6PK04 289 aaKnown RBP21.22■□□□□ 0.99
SOX4-201ENST00000244745 PCGF5Q86SE9 256 aa21.22■□□□□ 0.99
SOX4-201ENST00000244745 MARCH10Q8NA82 808 aaPredicted RBP21.22■□□□□ 0.99
SOX4-201ENST00000244745 RUBCNQ92622 972 aa21.22■□□□□ 0.99
SOX4-201ENST00000244745 CCDC68Q9H2F9 335 aa21.22■□□□□ 0.99
SOX4-201ENST00000244745 SLITRK6Q9H5Y7 841 aa21.22■□□□□ 0.99
SOX4-201ENST00000244745 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.22■□□□□ 0.99
SOX4-201ENST00000244745 RAD17O75943 681 aa21.22■□□□□ 0.99
SOX4-201ENST00000244745 MDH1P40925 334 aaKnown RBP21.22■□□□□ 0.99
SOX4-201ENST00000244745 USP49Q70CQ1 688 aa21.22■□□□□ 0.99
SOX4-201ENST00000244745 EEPD1Q7L9B9 569 aa21.22■□□□□ 0.99
SOX4-201ENST00000244745 GOLGA8QA0A0J9YX86 632 aa21.22■□□□□ 0.99
SOX4-201ENST00000244745 GOLGA8OA6NCC3 632 aa21.22■□□□□ 0.99
SOX4-201ENST00000244745 GOLGA8NF8WBI6 632 aa21.22■□□□□ 0.99
SOX4-201ENST00000244745 FGFR4P22455 802 aa21.22■□□□□ 0.99
SOX4-201ENST00000244745 CRKP46108 304 aa21.22■□□□□ 0.99
SOX4-201ENST00000244745 ARL4CP56559 192 aa21.22■□□□□ 0.99
SOX4-201ENST00000244745 RIN2Q8WYP3 895 aaPredicted RBP21.22■□□□□ 0.99
SOX4-201ENST00000244745 CALR3Q96L12 384 aaKnown RBP21.22■□□□□ 0.99
SOX4-201ENST00000244745 APOEP02649 317 aa21.22■□□□□ 0.99
SOX4-201ENST00000244745 TRIM55Q9BYV6 548 aa21.22■□□□□ 0.99
SOX4-201ENST00000244745 CFLARO15519 480 aa21.22■□□□□ 0.99
SOX4-201ENST00000244745 SOX5P35711 763 aa21.22■□□□□ 0.99
SOX4-201ENST00000244745 STX1BP61266 288 aa21.22■□□□□ 0.99
SOX4-201ENST00000244745 FAM187AA6NFU0 413 aa21.21■□□□□ 0.99
SOX4-201ENST00000244745 PDXDC2PQ6P474 469 aa21.21■□□□□ 0.99
SOX4-201ENST00000244745 FOXP4Q8IVH2 680 aaPredicted RBP21.21■□□□□ 0.99
SOX4-201ENST00000244745 RNF25Q96BH1 459 aaPredicted RBP21.21■□□□□ 0.99
SOX4-201ENST00000244745 TRAIPQ9BWF2 469 aa21.21■□□□□ 0.99
SOX4-201ENST00000244745 IPO5O00410 1097 aaKnown RBP21.21■□□□□ 0.99
SOX4-201ENST00000244745 ZRANB2O95218 330 aaKnown RBP eCLIP21.21■□□□□ 0.99
SOX4-201ENST00000244745 GYPCP04921 128 aa21.21■□□□□ 0.99
SOX4-201ENST00000244745 TRIM49P0CI25 452 aa21.21■□□□□ 0.99
SOX4-201ENST00000244745 TRIM49CP0CI26 452 aa21.21■□□□□ 0.99
SOX4-201ENST00000244745 SDCCAG3Q96C92 435 aa21.21■□□□□ 0.99
SOX4-201ENST00000244745 RBM41Q96IZ5 413 aaKnown RBP21.21■□□□□ 0.99
SOX4-201ENST00000244745 CDHR1Q96JP9 859 aa21.21■□□□□ 0.99
SOX4-201ENST00000244745 TRIM9Q9C026 710 aa21.21■□□□□ 0.99
SOX4-201ENST00000244745 TLK1Q9UKI8 766 aa21.21■□□□□ 0.99
SOX4-201ENST00000244745 SEC23IPQ9Y6Y8 1000 aaKnown RBP21.21■□□□□ 0.99
SOX4-201ENST00000244745 COPEO14579 308 aa21.21■□□□□ 0.99
SOX4-201ENST00000244745 MARK3P27448 753 aa21.21■□□□□ 0.99
SOX4-201ENST00000244745 ELF1P32519 619 aa21.21■□□□□ 0.99
SOX4-201ENST00000244745 CAV1Q03135 178 aa21.21■□□□□ 0.99
SOX4-201ENST00000244745 MTMR1Q13613 665 aa21.21■□□□□ 0.99
SOX4-201ENST00000244745 FGFR1OP2Q9NVK5 253 aa21.21■□□□□ 0.99
SOX4-201ENST00000244745 STOML1Q9UBI4 398 aa21.21■□□□□ 0.99
SOX4-201ENST00000244745 TMPRSS15P98073 1019 aa21.21■□□□□ 0.99
SOX4-201ENST00000244745 FAM213AQ9BRX8 229 aa21.21■□□□□ 0.99
SOX4-201ENST00000244745 K7ERI5 159 aa21.21■□□□□ 0.99
SOX4-201ENST00000244745 KITP10721 976 aa21.21■□□□□ 0.99
SOX4-201ENST00000244745 KRT80Q6KB66 452 aa21.21■□□□□ 0.99
SOX4-201ENST00000244745 CRLF3Q8IUI8 442 aa21.21■□□□□ 0.99
SOX4-201ENST00000244745 ENGASEQ8NFI3 743 aa21.21■□□□□ 0.99
SOX4-201ENST00000244745 C1orf54Q8WWF1 131 aa21.21■□□□□ 0.99
SOX4-201ENST00000244745 FAM84BQ96KN1 310 aaPredicted RBP21.21■□□□□ 0.99
SOX4-201ENST00000244745 FAM20AQ96MK3 541 aa21.21■□□□□ 0.99
SOX4-201ENST00000244745 C11orf70Q9BRQ4 267 aa21.21■□□□□ 0.99
SOX4-201ENST00000244745 ZNF341Q9BYN7 854 aa21.21■□□□□ 0.99
SOX4-201ENST00000244745 PPP1R37O75864 691 aa21.2■□□□□ 0.98
SOX4-201ENST00000244745 SPOPLQ6IQ16 392 aa21.2■□□□□ 0.98
SOX4-201ENST00000244745 CD209Q9NNX6 404 aa21.2■□□□□ 0.98
SOX4-201ENST00000244745 ZNF335Q9H4Z2 1342 aaPredicted RBP21.2■□□□□ 0.98
SOX4-201ENST00000244745 BRAFP15056 766 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms