RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 FSCN1Q16658 493 aaKnown RBP18.64■□□□□ 0.57
CDKN1A-201ENST00000244741 DGKDQ16760 1214 aa18.64■□□□□ 0.57
CDKN1A-201ENST00000244741 MTERF2Q49AM1 385 aa18.64■□□□□ 0.57
CDKN1A-201ENST00000244741 SLC9C1Q4G0N8 1177 aa18.64■□□□□ 0.57
CDKN1A-201ENST00000244741 CYP26C1Q6V0L0 522 aa18.64■□□□□ 0.57
CDKN1A-201ENST00000244741 SYT2Q8N9I0 419 aaPredicted RBP18.64■□□□□ 0.57
CDKN1A-201ENST00000244741 ZBTB10Q96DT7 871 aa18.64■□□□□ 0.57
CDKN1A-201ENST00000244741 DHTKD1Q96HY7 919 aaPredicted RBP18.64■□□□□ 0.57
CDKN1A-201ENST00000244741 ARHGEF35A5YM69 484 aa18.64■□□□□ 0.57
CDKN1A-201ENST00000244741 A6NJR5 290 aa18.64■□□□□ 0.57
CDKN1A-201ENST00000244741 KIF5CO60282 957 aa18.64■□□□□ 0.57
CDKN1A-201ENST00000244741 PPFIA4O75335 1185 aa18.64■□□□□ 0.57
CDKN1A-201ENST00000244741 OATP04181 439 aa18.64■□□□□ 0.57
CDKN1A-201ENST00000244741 MYL3P08590 195 aa18.64■□□□□ 0.57
CDKN1A-201ENST00000244741 CYP11B2P19099 503 aa18.64■□□□□ 0.57
CDKN1A-201ENST00000244741 RARRES1P49788 294 aa18.64■□□□□ 0.57
CDKN1A-201ENST00000244741 SOX10P56693 466 aa18.64■□□□□ 0.57
CDKN1A-201ENST00000244741 ASIC1P78348 528 aa18.64■□□□□ 0.57
CDKN1A-201ENST00000244741 MTFR1Q15390 333 aa18.64■□□□□ 0.57
CDKN1A-201ENST00000244741 GNASQ5JWF2 1037 aa18.64■□□□□ 0.57
CDKN1A-201ENST00000244741 HPS3Q969F9 1004 aa18.64■□□□□ 0.57
CDKN1A-201ENST00000244741 CEP170P1Q96L14 293 aa18.64■□□□□ 0.57
CDKN1A-201ENST00000244741 C16orf70Q9BSU1 422 aa18.64■□□□□ 0.57
CDKN1A-201ENST00000244741 XPNPEP3Q9NQH7 507 aa18.64■□□□□ 0.57
CDKN1A-201ENST00000244741 TTC26A0AVF1 554 aa18.63■□□□□ 0.57
CDKN1A-201ENST00000244741 SFI1A8K8P3 1242 aa18.63■□□□□ 0.57
CDKN1A-201ENST00000244741 USO1O60763 962 aaKnown RBP18.63■□□□□ 0.57
CDKN1A-201ENST00000244741 LGR5O75473 907 aa18.63■□□□□ 0.57
CDKN1A-201ENST00000244741 KRT18P05783 430 aaKnown RBP18.63■□□□□ 0.57
CDKN1A-201ENST00000244741 IDEP14735 1019 aa18.63■□□□□ 0.57
CDKN1A-201ENST00000244741 CTCFP49711 727 aaPredicted RBP18.63■□□□□ 0.57
CDKN1A-201ENST00000244741 DMTNQ08495 405 aa18.63■□□□□ 0.57
CDKN1A-201ENST00000244741 ZNF569Q5MCW4 686 aa18.63■□□□□ 0.57
CDKN1A-201ENST00000244741 RINT1Q6NUQ1 792 aa18.63■□□□□ 0.57
CDKN1A-201ENST00000244741 KRT222Q8N1A0 295 aa18.63■□□□□ 0.57
CDKN1A-201ENST00000244741 TRAPPC12Q8WVT3 735 aa18.63■□□□□ 0.57
CDKN1A-201ENST00000244741 EEF2KMTQ96G04 330 aa18.63■□□□□ 0.57
CDKN1A-201ENST00000244741 CHP1Q99653 195 aa18.63■□□□□ 0.57
CDKN1A-201ENST00000244741 ZHX3Q9H4I2 956 aa18.63■□□□□ 0.57
CDKN1A-201ENST00000244741 SMARCAD1Q9H4L7 1026 aa18.63■□□□□ 0.57
CDKN1A-201ENST00000244741 EXOC1Q9NV70 894 aa18.63■□□□□ 0.57
CDKN1A-201ENST00000244741 TRPC6Q9Y210 931 aa18.63■□□□□ 0.57
CDKN1A-201ENST00000244741 PES1O00541 588 aaKnown RBP18.62■□□□□ 0.57
CDKN1A-201ENST00000244741 SLC26A4O43511 780 aa18.62■□□□□ 0.57
CDKN1A-201ENST00000244741 LYPLA2O95372 231 aa18.62■□□□□ 0.57
CDKN1A-201ENST00000244741 PLCB4Q15147 1175 aa18.62■□□□□ 0.57
CDKN1A-201ENST00000244741 XKR3Q5GH77 459 aa18.62■□□□□ 0.57
CDKN1A-201ENST00000244741 ANKRD40Q6AI12 368 aa18.62■□□□□ 0.57
CDKN1A-201ENST00000244741 PADI6Q6TGC4 694 aa18.62■□□□□ 0.57
CDKN1A-201ENST00000244741 RSRC2Q7L4I2 434 aaKnown RBP18.62■□□□□ 0.57
CDKN1A-201ENST00000244741 CSGALNACT2Q8N6G5 542 aa18.62■□□□□ 0.57
CDKN1A-201ENST00000244741 AFAP1L1Q8TED9 768 aa18.62■□□□□ 0.57
CDKN1A-201ENST00000244741 P2RX5Q93086 422 aa18.62■□□□□ 0.57
CDKN1A-201ENST00000244741 UNC93B1Q9H1C4 597 aa18.62■□□□□ 0.57
CDKN1A-201ENST00000244741 HMX1Q9NP08 348 aaPredicted RBP18.62■□□□□ 0.57
CDKN1A-201ENST00000244741 DDX20Q9UHI6 824 aaKnown RBP18.62■□□□□ 0.57
CDKN1A-201ENST00000244741 A0A1W2PQC6 194 aa18.62■□□□□ 0.57
CDKN1A-201ENST00000244741 RSPH10B2B2RC85 870 aa18.62■□□□□ 0.57
CDKN1A-201ENST00000244741 H3BRB1 525 aa18.62■□□□□ 0.57
CDKN1A-201ENST00000244741 RSPH10BP0C881 870 aa18.62■□□□□ 0.57
CDKN1A-201ENST00000244741 MUTP22033 750 aa18.62■□□□□ 0.57
CDKN1A-201ENST00000244741 CCNE1P24864 410 aa18.62■□□□□ 0.57
CDKN1A-201ENST00000244741 IGBP1P78318 339 aa18.62■□□□□ 0.57
CDKN1A-201ENST00000244741 NOC3LQ8WTT2 800 aaKnown RBP18.62■□□□□ 0.57
CDKN1A-201ENST00000244741 TUT1Q9H6E5 874 aaKnown RBP18.62■□□□□ 0.57
CDKN1A-201ENST00000244741 MAGEC2Q9UBF1 373 aaPredicted RBP18.62■□□□□ 0.57
CDKN1A-201ENST00000244741 FHOD1Q9Y613 1164 aa18.62■□□□□ 0.57
CDKN1A-201ENST00000244741 EMSYQ7Z589 1322 aa18.61■□□□□ 0.57
CDKN1A-201ENST00000244741 ARHGAP25P42331 645 aa18.61■□□□□ 0.57
CDKN1A-201ENST00000244741 CPT1AP50416 773 aa18.61■□□□□ 0.57
CDKN1A-201ENST00000244741 AMPD3Q01432 767 aa18.61■□□□□ 0.57
CDKN1A-201ENST00000244741 TEX35Q5T0J7 233 aa18.61■□□□□ 0.57
CDKN1A-201ENST00000244741 PLPPR4Q7Z2D5 763 aa18.61■□□□□ 0.57
CDKN1A-201ENST00000244741 CTU1Q7Z7A3 348 aaKnown RBP18.61■□□□□ 0.57
CDKN1A-201ENST00000244741 CCDC47Q96A33 483 aaKnown RBP18.61■□□□□ 0.57
CDKN1A-201ENST00000244741 REEP2Q9BRK0 252 aa18.61■□□□□ 0.57
CDKN1A-201ENST00000244741 CYP26B1Q9NR63 512 aa18.61■□□□□ 0.57
CDKN1A-201ENST00000244741 ERAP1Q9NZ08 941 aa18.61■□□□□ 0.57
CDKN1A-201ENST00000244741 GJA9P57773 515 aa18.61■□□□□ 0.57
CDKN1A-201ENST00000244741 C1orf186Q6ZWK4 172 aa18.61■□□□□ 0.57
CDKN1A-201ENST00000244741 OTUD6AQ7L8S5 288 aa18.61■□□□□ 0.57
CDKN1A-201ENST00000244741 OR8K1Q8NGG5 319 aa18.61■□□□□ 0.57
CDKN1A-201ENST00000244741 DNAJC19Q96DA6 116 aa18.61■□□□□ 0.57
CDKN1A-201ENST00000244741 GPRC5CQ9NQ84 441 aa18.61■□□□□ 0.57
CDKN1A-201ENST00000244741 TBC1D7Q9P0N9 293 aa18.61■□□□□ 0.57
CDKN1A-201ENST00000244741 DBR1Q9UK59 544 aaKnown RBP18.61■□□□□ 0.57
CDKN1A-201ENST00000244741 RBAK-RBAKDNI3L0D1 243 aa18.6■□□□□ 0.57
CDKN1A-201ENST00000244741 DKC1O60832 514 aaKnown RBP eCLIP18.6■□□□□ 0.578e-30■■■■■ 47.9
CDKN1A-201ENST00000244741 ZRANB2O95218 330 aaKnown RBP eCLIP18.6■□□□□ 0.57
CDKN1A-201ENST00000244741 BMS1Q14692 1282 aaKnown RBP18.6■□□□□ 0.57
CDKN1A-201ENST00000244741 CXCL17Q6UXB2 119 aa18.6■□□□□ 0.57
CDKN1A-201ENST00000244741 SLC35F6Q8N357 371 aa18.6■□□□□ 0.57
CDKN1A-201ENST00000244741 KAT2BQ92831 832 aa18.6■□□□□ 0.57
CDKN1A-201ENST00000244741 TUBGCP2Q9BSJ2 902 aa18.6■□□□□ 0.57
CDKN1A-201ENST00000244741 ARGLU1Q9NWB6 273 aaPredicted RBP18.6■□□□□ 0.57
CDKN1A-201ENST00000244741 CAPN11Q9UMQ6 739 aa18.6■□□□□ 0.57
CDKN1A-201ENST00000244741 LUC7L2Q9Y383 392 aaKnown RBP18.6■□□□□ 0.57
CDKN1A-201ENST00000244741 Q9Y3F1 56 aa18.6■□□□□ 0.57
CDKN1A-201ENST00000244741 ADAMTS4O75173 837 aa18.59■□□□□ 0.57
CDKN1A-201ENST00000244741 DNM2P50570 870 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms