RNA–Protein interactions for RNA: ENST00000238682.7

TGFB3-201, Transcript of transforming growth factor beta 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB3, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-201ENST00000238682 MAP9Q49MG5 647 aa10.3□□□□□ -0.76
TGFB3-201ENST00000238682 C4orf19Q8IY42 314 aa10.3□□□□□ -0.76
TGFB3-201ENST00000238682 DEFB123Q8N688 67 aa10.3□□□□□ -0.76
TGFB3-201ENST00000238682 SLC17A8Q8NDX2 589 aa10.3□□□□□ -0.76
TGFB3-201ENST00000238682 CNNM3Q8NE01 707 aa10.3□□□□□ -0.76
TGFB3-201ENST00000238682 SPATA20Q8TB22 786 aa10.3□□□□□ -0.76
TGFB3-201ENST00000238682 PRR7Q8TB68 274 aa10.3□□□□□ -0.76
TGFB3-201ENST00000238682 ATP6V0A1Q93050 837 aa10.3□□□□□ -0.76
TGFB3-201ENST00000238682 TRIM43Q96BQ3 446 aaPredicted RBP10.3□□□□□ -0.76
TGFB3-201ENST00000238682 FAM167AQ96KS9 214 aa10.3□□□□□ -0.76
TGFB3-201ENST00000238682 RNPC3Q96LT9 517 aaKnown RBP10.3□□□□□ -0.76
TGFB3-201ENST00000238682 GSDMAQ96QA5 445 aa10.3□□□□□ -0.76
TGFB3-201ENST00000238682 HSD17B14Q9BPX1 270 aa10.3□□□□□ -0.76
TGFB3-201ENST00000238682 PRDM5Q9NQX1 630 aaPredicted RBP10.3□□□□□ -0.76
TGFB3-201ENST00000238682 KBTBD4Q9NVX7 518 aa10.3□□□□□ -0.76
TGFB3-201ENST00000238682 DACH1Q9UI36 760 aa10.3□□□□□ -0.76
TGFB3-201ENST00000238682 TUBE1Q9UJT0 475 aa10.3□□□□□ -0.76
TGFB3-201ENST00000238682 GH1P01241 217 aa10.29□□□□□ -0.76
TGFB3-201ENST00000238682 MYCLP12524 364 aaPredicted RBP10.29□□□□□ -0.76
TGFB3-201ENST00000238682 PSMD2Q13200 908 aa10.29□□□□□ -0.76
TGFB3-201ENST00000238682 HIC1Q14526 733 aa10.29□□□□□ -0.76
TGFB3-201ENST00000238682 TERF2Q15554 542 aa10.29□□□□□ -0.76
TGFB3-201ENST00000238682 FAM160B1Q5W0V3 765 aa10.29□□□□□ -0.76
TGFB3-201ENST00000238682 IL31RAQ8NI17 732 aa10.29□□□□□ -0.76
TGFB3-201ENST00000238682 CAGE1Q8TC20 777 aa10.29□□□□□ -0.76
TGFB3-201ENST00000238682 PHOSPHO2Q8TCD6 241 aa10.29□□□□□ -0.76
TGFB3-201ENST00000238682 SNX29Q8TEQ0 813 aa10.29□□□□□ -0.76
TGFB3-201ENST00000238682 KCNN1Q92952 543 aa10.29□□□□□ -0.76
TGFB3-201ENST00000238682 PDLIM2Q96JY6 352 aa10.29□□□□□ -0.76
TGFB3-201ENST00000238682 CLIC6Q96NY7 704 aa10.29□□□□□ -0.76
TGFB3-201ENST00000238682 C7orf25Q9BPX7 421 aa10.29□□□□□ -0.76
TGFB3-201ENST00000238682 JPH1Q9HDC5 661 aaPredicted RBP10.29□□□□□ -0.76
TGFB3-201ENST00000238682 BMP2KQ9NSY1 1161 aaPredicted RBP10.29□□□□□ -0.76
TGFB3-201ENST00000238682 CUEDC1Q9NWM3 386 aaPredicted RBP10.29□□□□□ -0.76
TGFB3-201ENST00000238682 SLC9A2Q9UBY0 812 aa10.29□□□□□ -0.76
TGFB3-201ENST00000238682 PCDHA10Q9Y5I2 948 aa10.29□□□□□ -0.76
TGFB3-201ENST00000238682 PDE4DIPQ5VU43 2346 aa10.29□□□□□ -0.76
TGFB3-201ENST00000238682 EMSYQ7Z589 1322 aa10.29□□□□□ -0.76
TGFB3-201ENST00000238682 IGKV6D-21A0A0A0MT36 114 aa10.29□□□□□ -0.76
TGFB3-201ENST00000238682 SOX1O00570 391 aaPredicted RBP10.29□□□□□ -0.76
TGFB3-201ENST00000238682 BAIAP3O94812 1187 aa10.29□□□□□ -0.76
TGFB3-201ENST00000238682 IPO7O95373 1038 aaKnown RBP10.29□□□□□ -0.76
TGFB3-201ENST00000238682 EYA4O95677 639 aa10.29□□□□□ -0.76
TGFB3-201ENST00000238682 CCDC192P0DO97 292 aa10.29□□□□□ -0.76
TGFB3-201ENST00000238682 ARP10275 920 aa10.29□□□□□ -0.76
TGFB3-201ENST00000238682 HOXD8P13378 290 aaPredicted RBP10.29□□□□□ -0.76
TGFB3-201ENST00000238682 SMPD1P17405 629 aa10.29□□□□□ -0.76
TGFB3-201ENST00000238682 GSCP56915 257 aaPredicted RBP10.29□□□□□ -0.76
TGFB3-201ENST00000238682 PSMC5P62195 406 aa10.29□□□□□ -0.76
TGFB3-201ENST00000238682 ITGA7Q13683 1181 aa10.29□□□□□ -0.76
TGFB3-201ENST00000238682 PDXDC2PQ6P474 469 aa10.29□□□□□ -0.76
TGFB3-201ENST00000238682 CCDC62Q6P9F0 684 aa10.29□□□□□ -0.76
TGFB3-201ENST00000238682 MIER3Q7Z3K6 550 aa10.29□□□□□ -0.76
TGFB3-201ENST00000238682 ANKRD7Q92527 254 aa10.29□□□□□ -0.76
TGFB3-201ENST00000238682 MMTAG2Q9BU76 263 aaKnown RBP10.29□□□□□ -0.76
TGFB3-201ENST00000238682 ASTN1O14525 1302 aa10.28□□□□□ -0.76
TGFB3-201ENST00000238682 PHLPP2Q6ZVD8 1323 aa10.28□□□□□ -0.76
TGFB3-201ENST00000238682 A0A1B0GVL5 298 aa10.28□□□□□ -0.76
TGFB3-201ENST00000238682 GAS2O43903 313 aaKnown RBP10.28□□□□□ -0.76
TGFB3-201ENST00000238682 CCT6AP40227 531 aaKnown RBP10.28□□□□□ -0.76
TGFB3-201ENST00000238682 CNTN2Q02246 1040 aa10.28□□□□□ -0.76
TGFB3-201ENST00000238682 QPCTQ16769 361 aa10.28□□□□□ -0.76
TGFB3-201ENST00000238682 SV2BQ7L1I2 683 aa10.28□□□□□ -0.76
TGFB3-201ENST00000238682 ZNF710Q8N1W2 664 aa10.28□□□□□ -0.76
TGFB3-201ENST00000238682 OR6J1Q8NGC5 347 aa10.28□□□□□ -0.76
TGFB3-201ENST00000238682 RAD54LQ92698 747 aa10.28□□□□□ -0.76
TGFB3-201ENST00000238682 CAPN10Q9HC96 672 aa10.28□□□□□ -0.76
TGFB3-201ENST00000238682 KLF15Q9UIH9 416 aa10.28□□□□□ -0.76
TGFB3-201ENST00000238682 DDX41Q9UJV9 622 aaKnown RBP10.28□□□□□ -0.76
TGFB3-201ENST00000238682 DNM3Q9UQ16 869 aa10.28□□□□□ -0.76
TGFB3-201ENST00000238682 COL4A6Q14031 1691 aa10.28□□□□□ -0.76
TGFB3-201ENST00000238682 POLR2DO15514 142 aaKnown RBP10.28□□□□□ -0.76
TGFB3-201ENST00000238682 PQBP1O60828 265 aaKnown RBP10.28□□□□□ -0.76
TGFB3-201ENST00000238682 LGR5O75473 907 aa10.28□□□□□ -0.76
TGFB3-201ENST00000238682 QARSP47897 775 aaKnown RBP10.28□□□□□ -0.76
TGFB3-201ENST00000238682 TYRO3Q06418 890 aa10.28□□□□□ -0.76
TGFB3-201ENST00000238682 POSTNQ15063 836 aa10.28□□□□□ -0.76
TGFB3-201ENST00000238682 CELF3Q5SZQ8 465 aaKnown RBP10.28□□□□□ -0.76
TGFB3-201ENST00000238682 OTUD6AQ7L8S5 288 aa10.28□□□□□ -0.76
TGFB3-201ENST00000238682 PLPPR4Q7Z2D5 763 aa10.28□□□□□ -0.76
TGFB3-201ENST00000238682 EIF2AK1Q9BQI3 630 aaKnown RBP10.28□□□□□ -0.76
TGFB3-201ENST00000238682 BPIFA3Q9BQP9 254 aa10.28□□□□□ -0.76
TGFB3-201ENST00000238682 UNC45AQ9H3U1 944 aa10.28□□□□□ -0.76
TGFB3-201ENST00000238682 NUB1Q9Y5A7 615 aa10.28□□□□□ -0.76
TGFB3-201ENST00000238682 SMCHD1A6NHR9 2005 aa10.28□□□□□ -0.76
TGFB3-201ENST00000238682 IGSF9BQ9UPX0 1349 aa10.27□□□□□ -0.77
TGFB3-201ENST00000238682 RGS20O76081 388 aa10.27□□□□□ -0.77
TGFB3-201ENST00000238682 MAPTP10636 758 aaKnown RBP10.27□□□□□ -0.77
TGFB3-201ENST00000238682 SARSP49591 514 aaKnown RBP10.27□□□□□ -0.77
TGFB3-201ENST00000238682 GRB10Q13322 594 aa10.27□□□□□ -0.77
TGFB3-201ENST00000238682 ITGB3BPQ13352 177 aaPredicted RBP10.27□□□□□ -0.77
TGFB3-201ENST00000238682 ZRSR1Q15695 479 aaKnown RBP10.27□□□□□ -0.77
TGFB3-201ENST00000238682 SYT2Q8N9I0 419 aaPredicted RBP10.27□□□□□ -0.77
TGFB3-201ENST00000238682 RASSF8Q8NHQ8 419 aa10.27□□□□□ -0.77
TGFB3-201ENST00000238682 TMC2Q8TDI7 906 aa10.27□□□□□ -0.77
TGFB3-201ENST00000238682 SEPT1Q8WYJ6 367 aa10.27□□□□□ -0.77
TGFB3-201ENST00000238682 LARP4BQ92615 738 aaKnown RBP10.27□□□□□ -0.77
TGFB3-201ENST00000238682 EPSTI1Q96J88 318 aa10.27□□□□□ -0.77
TGFB3-201ENST00000238682 PNMA5Q96PV4 448 aa10.27□□□□□ -0.77
TGFB3-201ENST00000238682 SLC9A7Q96T83 725 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms