RNA–Protein interactions for RNA: ENST00000234179.6

PRKD3-201, Transcript of protein kinase D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKD3, Length 5,900 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-201ENST00000234179 PCDHGA5Q9Y5G8 931 aa2.59□□□□□ -2
PRKD3-201ENST00000234179 SCN5AQ14524 2016 aa2.59□□□□□ -2
PRKD3-201ENST00000234179 POTEMA6NI47 508 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 SOBPA7XYQ1 873 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 SREBF1P36956 1147 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 MRPS9P82933 396 aaKnown RBP2.58□□□□□ -2
PRKD3-201ENST00000234179 RNASELQ05823 741 aaKnown RBP2.58□□□□□ -2
PRKD3-201ENST00000234179 TCTN1Q2MV58 587 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 ZNF598Q86UK7 904 aaKnown RBP2.58□□□□□ -2
PRKD3-201ENST00000234179 TBC1D10CQ8IV04 446 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 CKAP2LQ8IYA6 745 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 DEPDC1BQ8WUY9 529 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 LINC01599Q8WXQ3 324 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 AGO3Q9H9G7 860 aaKnown RBP2.58□□□□□ -2
PRKD3-201ENST00000234179 RIC8AQ9NPQ8 531 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 GDE1Q9NZC3 331 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 MAD2L2Q9UI95 211 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 SIT1Q9Y3P8 196 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 NLRC5Q86WI3 1866 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 CAPN8A6NHC0 703 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 STK25O00506 426 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 LINC01565O15544 149 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 LILRB5O75023 590 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 ALDH2P05091 517 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 ADRB1P08588 477 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 GOLGA8HP0CJ92 632 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 KLRC2P26717 231 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 GBP2P32456 591 aaPredicted RBP2.58□□□□□ -2
PRKD3-201ENST00000234179 SHC2P98077 582 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 DLX2Q07687 328 aaPredicted RBP2.58□□□□□ -2
PRKD3-201ENST00000234179 TROAPQ12815 778 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 LETM2Q2VYF4 491 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 CWF19L1Q69YN2 538 aaKnown RBP2.58□□□□□ -2
PRKD3-201ENST00000234179 PPP4R3AQ6IN85 833 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 CPLX2Q6PUV4 134 aaKnown RBP2.58□□□□□ -2
PRKD3-201ENST00000234179 HOMER1Q86YM7 354 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 C1orf210Q8IVY1 113 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 KIAA0319LQ8IZA0 1049 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 TET1Q8NFU7 2136 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 SMG7Q92540 1137 aaKnown RBP2.58□□□□□ -2
PRKD3-201ENST00000234179 NELL1Q92832 810 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 PURBQ96QR8 312 aaKnown RBP2.58□□□□□ -2
PRKD3-201ENST00000234179 POMKQ9H5K3 350 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 NOC2LQ9Y3T9 749 aaKnown RBP2.58□□□□□ -2
PRKD3-201ENST00000234179 LCTP09848 1927 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 B4E1Z4 1266 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 ANHXE9PGG2 379 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 TRAPPC3O43617 180 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 ECI2O75521 394 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 C22orf31O95567 290 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 BRD1O95696 1058 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 SP9P0CG40 484 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 SCP2P22307 547 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 CIITAP33076 1130 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 EMP3P54852 163 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 AKAP17AQ02040 695 aaKnown RBP2.58□□□□□ -2
PRKD3-201ENST00000234179 SPIRE1Q08AE8 756 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 SEMA3FQ13275 785 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 PLD1Q13393 1074 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 LAPTM4AQ15012 233 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 PAN2Q504Q3 1202 aaKnown RBP2.58□□□□□ -2
PRKD3-201ENST00000234179 TMEM63BQ5T3F8 832 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 ANKRD45Q5TZF3 282 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 IL31Q6EBC2 164 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 PDZRN4Q6ZMN7 1036 aaPredicted RBP2.58□□□□□ -2
PRKD3-201ENST00000234179 NFXL1Q6ZNB6 911 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 MRPL10Q7Z7H8 261 aaKnown RBP2.58□□□□□ -2
PRKD3-201ENST00000234179 PDCD7Q8N8D1 485 aaKnown RBP2.58□□□□□ -2
PRKD3-201ENST00000234179 CLDN23Q96B33 292 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 CASD1Q96PB1 797 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 RPS6KC1Q96S38 1066 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 DDX23Q9BUQ8 820 aaKnown RBP2.58□□□□□ -2
PRKD3-201ENST00000234179 APOL6Q9BWW8 343 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 ANO3Q9BYT9 981 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 PRKD2Q9BZL6 878 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 C8orf33Q9H7E9 229 aaPredicted RBP2.58□□□□□ -2
PRKD3-201ENST00000234179 TSHZ2Q9NRE2 1034 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 ZSWIM5Q9P217 1185 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 PCDHA6Q9UN73 950 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 FAN1Q9Y2M0 1017 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 GIT1Q9Y2X7 761 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 PCDHA8Q9Y5H6 950 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 STK24Q9Y6E0 443 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 KANSL1LA0AUZ9 987 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 OPLAHO14841 1288 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 SMARCA5O60264 1052 aaPredicted RBP2.58□□□□□ -2
PRKD3-201ENST00000234179 ATG13O75143 517 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 KARSQ15046 597 aaKnown RBP2.58□□□□□ -2
PRKD3-201ENST00000234179 MLF2Q15773 248 aaPredicted RBP2.58□□□□□ -2
PRKD3-201ENST00000234179 ZBTB41Q5SVQ8 909 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 MARCH8Q5T0T0 291 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 ABHD15Q6UXT9 468 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 ZNF852Q6ZMS4 543 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 RABEPKQ7Z6M1 372 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 ADGRD2Q7Z7M1 963 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 PLA2G4DQ86XP0 818 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 SMC5Q8IY18 1101 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 ZNF654Q8IZM8 581 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 VPS52Q8N1B4 723 aa2.58□□□□□ -2
PRKD3-201ENST00000234179 ZBTB44Q8NCP5 570 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms