RNA–Protein interactions for RNA: ENST00000231524.13

TRIM23-201, Transcript of tripartite motif containing 23, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM23, Length 4,186 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-201ENST00000231524 KIFAP3Q92845 792 aa10.48□□□□□ -0.73
TRIM23-201ENST00000231524 GRAMD1AQ96CP6 724 aa10.48□□□□□ -0.73
TRIM23-201ENST00000231524 INPP4AQ96PE3 977 aaPredicted RBP10.48□□□□□ -0.73
TRIM23-201ENST00000231524 CENPKQ9BS16 269 aa10.48□□□□□ -0.73
TRIM23-201ENST00000231524 SUCLA2Q9P2R7 463 aaPredicted RBP10.48□□□□□ -0.73
TRIM23-201ENST00000231524 NPHP3-ACAD11A0A0J9YXS1 232 aa10.48□□□□□ -0.73
TRIM23-201ENST00000231524 MIF4GDA9UHW6 222 aaKnown RBP10.48□□□□□ -0.73
TRIM23-201ENST00000231524 SMIM22K7EJ46 135 aa10.48□□□□□ -0.73
TRIM23-201ENST00000231524 PSMC2P35998 433 aaKnown RBP10.48□□□□□ -0.73
TRIM23-201ENST00000231524 RNASELQ05823 741 aaKnown RBP10.48□□□□□ -0.73
TRIM23-201ENST00000231524 MKRN3Q13064 507 aaKnown RBP10.48□□□□□ -0.73
TRIM23-201ENST00000231524 SPATA24Q86W54 205 aa10.48□□□□□ -0.73
TRIM23-201ENST00000231524 EGFL6Q8IUX8 553 aa10.48□□□□□ -0.73
TRIM23-201ENST00000231524 RHOT2Q8IXI1 618 aa10.48□□□□□ -0.73
TRIM23-201ENST00000231524 SYT2Q8N9I0 419 aaPredicted RBP10.48□□□□□ -0.73
TRIM23-201ENST00000231524 SLC44A5Q8NCS7 719 aa10.48□□□□□ -0.73
TRIM23-201ENST00000231524 SYN2Q92777 582 aaPredicted RBP10.48□□□□□ -0.73
TRIM23-201ENST00000231524 UBE2TQ9NPD8 197 aaPredicted RBP10.48□□□□□ -0.73
TRIM23-201ENST00000231524 CHORDC1Q9UHD1 332 aaPredicted RBP10.48□□□□□ -0.73
TRIM23-201ENST00000231524 THRAP3Q9Y2W1 955 aaKnown RBP10.48□□□□□ -0.73
TRIM23-201ENST00000231524 RIMBP2O15034 1052 aa10.47□□□□□ -0.73
TRIM23-201ENST00000231524 TNIP1Q15025 636 aa10.47□□□□□ -0.73
TRIM23-201ENST00000231524 CNBD1Q8NA66 436 aa10.47□□□□□ -0.73
TRIM23-201ENST00000231524 B4GALNT2Q8NHY0 566 aa10.47□□□□□ -0.73
TRIM23-201ENST00000231524 C18orf8Q96DM3 657 aa10.47□□□□□ -0.73
TRIM23-201ENST00000231524 C9orf72Q96LT7 481 aa10.47□□□□□ -0.73
TRIM23-201ENST00000231524 NAP1L4Q99733 375 aaKnown RBP10.47□□□□□ -0.73
TRIM23-201ENST00000231524 HEMGNQ9BXL5 484 aa10.47□□□□□ -0.73
TRIM23-201ENST00000231524 NYXQ9GZU5 481 aa10.47□□□□□ -0.73
TRIM23-201ENST00000231524 DCP1AQ9NPI6 582 aaPredicted RBP10.47□□□□□ -0.73
TRIM23-201ENST00000231524 PNMA3Q9UL41 463 aa10.47□□□□□ -0.73
TRIM23-201ENST00000231524 ZBTB21Q9ULJ3 1066 aa10.47□□□□□ -0.73
TRIM23-201ENST00000231524 A8MUI8 341 aa10.47□□□□□ -0.73
TRIM23-201ENST00000231524 SNX3O60493 162 aa10.47□□□□□ -0.73
TRIM23-201ENST00000231524 CSF1RP07333 972 aa10.47□□□□□ -0.73
TRIM23-201ENST00000231524 KRT16P08779 473 aa10.47□□□□□ -0.73
TRIM23-201ENST00000231524 ATF7P17544 494 aaPredicted RBP10.47□□□□□ -0.73
TRIM23-201ENST00000231524 SERPINB6P35237 376 aa10.47□□□□□ -0.73
TRIM23-201ENST00000231524 MYL7Q01449 175 aa10.47□□□□□ -0.73
TRIM23-201ENST00000231524 MECOMQ03112 1051 aa10.47□□□□□ -0.73
TRIM23-201ENST00000231524 LACTB2Q53H82 288 aaPredicted RBP10.47□□□□□ -0.73
TRIM23-201ENST00000231524 NAALADL2Q58DX5 795 aa10.47□□□□□ -0.73
TRIM23-201ENST00000231524 GJB7Q6PEY0 223 aa10.47□□□□□ -0.73
TRIM23-201ENST00000231524 RNF207Q6ZRF8 634 aa10.47□□□□□ -0.73
TRIM23-201ENST00000231524 ZNF571Q7Z3V5 609 aaPredicted RBP10.47□□□□□ -0.73
TRIM23-201ENST00000231524 CTAGE3PQ8IX95 158 aa10.47□□□□□ -0.73
TRIM23-201ENST00000231524 ST13P4Q8IZP2 240 aaPredicted RBP10.47□□□□□ -0.73
TRIM23-201ENST00000231524 PURBQ96QR8 312 aaKnown RBP10.47□□□□□ -0.73
TRIM23-201ENST00000231524 CORO1CQ9ULV4 474 aaPredicted RBP10.47□□□□□ -0.73
TRIM23-201ENST00000231524 POTEB3A0JP26 581 aa10.47□□□□□ -0.73
TRIM23-201ENST00000231524 POTECB2RU33 542 aa10.47□□□□□ -0.73
TRIM23-201ENST00000231524 KLRC4O43908 158 aa10.47□□□□□ -0.73
TRIM23-201ENST00000231524 HAUS5O94927 633 aa10.47□□□□□ -0.73
TRIM23-201ENST00000231524 FTLP02792 175 aaPredicted RBP10.47□□□□□ -0.73
TRIM23-201ENST00000231524 PECAM1P16284 738 aaPredicted RBP10.47□□□□□ -0.73
TRIM23-201ENST00000231524 HSPA1LP34931 641 aa10.47□□□□□ -0.73
TRIM23-201ENST00000231524 IL6STP40189 918 aaPredicted RBP10.47□□□□□ -0.73
TRIM23-201ENST00000231524 SH3BGRP55822 239 aaPredicted RBP10.47□□□□□ -0.73
TRIM23-201ENST00000231524 MAPK7Q13164 816 aa10.47□□□□□ -0.73
TRIM23-201ENST00000231524 POTEBQ6S5H4 581 aa10.47□□□□□ -0.73
TRIM23-201ENST00000231524 FAM178BQ8IXR5 827 aa10.47□□□□□ -0.73
TRIM23-201ENST00000231524 PALM2Q8IXS6 379 aa10.47□□□□□ -0.73
TRIM23-201ENST00000231524 HIPK4Q8NE63 616 aa10.47□□□□□ -0.73
TRIM23-201ENST00000231524 TMEM237Q96Q45 408 aa10.47□□□□□ -0.73
TRIM23-201ENST00000231524 TMEM47Q9BQJ4 181 aa10.47□□□□□ -0.73
TRIM23-201ENST00000231524 OSGEPQ9NPF4 335 aa10.47□□□□□ -0.73
TRIM23-201ENST00000231524 PKD2L1Q9P0L9 805 aa10.47□□□□□ -0.73
TRIM23-201ENST00000231524 ANGPTL2Q9UKU9 493 aa10.47□□□□□ -0.73
TRIM23-201ENST00000231524 PITPNM2Q9BZ72 1349 aa10.47□□□□□ -0.73
TRIM23-201ENST00000231524 ZCCHC18P0CG32 403 aa10.47□□□□□ -0.73
TRIM23-201ENST00000231524 DLATP10515 647 aaKnown RBP10.47□□□□□ -0.73
TRIM23-201ENST00000231524 SFR1Q86XK3 245 aa10.47□□□□□ -0.73
TRIM23-201ENST00000231524 TRIM59Q8IWR1 403 aa10.47□□□□□ -0.73
TRIM23-201ENST00000231524 FAM161BQ96MY7 647 aa10.47□□□□□ -0.73
TRIM23-201ENST00000231524 SAYSD1Q9NPB0 183 aa10.47□□□□□ -0.73
TRIM23-201ENST00000231524 PCDHGC5Q9Y5F6 944 aa10.47□□□□□ -0.73
TRIM23-201ENST00000231524 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.47□□□□□ -0.73
TRIM23-201ENST00000231524 NR3C1P04150 777 aa10.46□□□□□ -0.73
TRIM23-201ENST00000231524 RFC5P40937 340 aa10.46□□□□□ -0.73
TRIM23-201ENST00000231524 PPP4R3CPQ6ZMV5 832 aa10.46□□□□□ -0.73
TRIM23-201ENST00000231524 SDCCAG8Q86SQ7 713 aaPredicted RBP10.46□□□□□ -0.73
TRIM23-201ENST00000231524 SLF2Q8IX21 1173 aa10.46□□□□□ -0.73
TRIM23-201ENST00000231524 ZNF512BQ96KM6 892 aaPredicted RBP10.46□□□□□ -0.73
TRIM23-201ENST00000231524 CFAP57Q96MR6 1250 aa10.46□□□□□ -0.73
TRIM23-201ENST00000231524 MOV10L1Q9BXT6 1211 aaKnown RBP10.46□□□□□ -0.73
TRIM23-201ENST00000231524 RXFP1Q9HBX9 757 aa10.46□□□□□ -0.73
TRIM23-201ENST00000231524 ALG13Q9NP73 1137 aaKnown RBP10.46□□□□□ -0.73
TRIM23-201ENST00000231524 METTL5Q9NRN9 209 aaKnown RBP10.46□□□□□ -0.73
TRIM23-201ENST00000231524 C2CD2Q9Y426 696 aa10.46□□□□□ -0.73
TRIM23-201ENST00000231524 ANKRD26Q9UPS8 1709 aa10.46□□□□□ -0.73
TRIM23-201ENST00000231524 PHF2O75151 1096 aa10.46□□□□□ -0.74
TRIM23-201ENST00000231524 PLS3P13797 630 aa10.46□□□□□ -0.74
TRIM23-201ENST00000231524 MARK3P27448 753 aa10.46□□□□□ -0.74
TRIM23-201ENST00000231524 BBOF1Q8ND07 529 aa10.46□□□□□ -0.74
TRIM23-201ENST00000231524 CCDC127Q96BQ5 260 aa10.46□□□□□ -0.74
TRIM23-201ENST00000231524 ZCWPW1Q9H0M4 648 aa10.46□□□□□ -0.74
TRIM23-201ENST00000231524 SRP68Q9UHB9 627 aaKnown RBP10.46□□□□□ -0.74
TRIM23-201ENST00000231524 BCS1LQ9Y276 419 aa10.46□□□□□ -0.74
TRIM23-201ENST00000231524 ALG6Q9Y672 507 aa10.46□□□□□ -0.74
TRIM23-201ENST00000231524 PPFIA2O75334 1257 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms