RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 COL23A1Q86Y22 540 aaPredicted RBP17.67■□□□□ 0.42
LTBR-201ENST00000228918 OR2W6PQ8NHA6 318 aa17.67■□□□□ 0.42
LTBR-201ENST00000228918 CTNNBL1Q8WYA6 563 aaPredicted RBP17.67■□□□□ 0.42
LTBR-201ENST00000228918 NACC1Q96RE7 527 aa17.67■□□□□ 0.42
LTBR-201ENST00000228918 CSRNP1Q96S65 589 aa17.67■□□□□ 0.42
LTBR-201ENST00000228918 DAAM1Q9Y4D1 1078 aa17.67■□□□□ 0.42
LTBR-201ENST00000228918 POLR2MP0CAP2 368 aa17.66■□□□□ 0.42
LTBR-201ENST00000228918 FLT3P36888 993 aa17.66■□□□□ 0.42
LTBR-201ENST00000228918 MTMR3Q13615 1198 aa17.66■□□□□ 0.42
LTBR-201ENST00000228918 DCAF12L1Q5VU92 463 aa17.66■□□□□ 0.42
LTBR-201ENST00000228918 FMNL3Q8IVF7 1028 aa17.66■□□□□ 0.42
LTBR-201ENST00000228918 PAGR1Q9BTK6 254 aa17.66■□□□□ 0.42
LTBR-201ENST00000228918 PPP1R9AQ9ULJ8 1098 aa17.66■□□□□ 0.42
LTBR-201ENST00000228918 BRWD3Q6RI45 1802 aa17.65■□□□□ 0.42
LTBR-201ENST00000228918 SRRM3A6NNA2 597 aaPredicted RBP17.65■□□□□ 0.42
LTBR-201ENST00000228918 FGGP02679 453 aa17.65■□□□□ 0.42
LTBR-201ENST00000228918 MMP10P09238 476 aa17.65■□□□□ 0.42
LTBR-201ENST00000228918 CCDC172P0C7W6 258 aa17.65■□□□□ 0.42
LTBR-201ENST00000228918 ABCB4P21439 1286 aa17.65■□□□□ 0.42
LTBR-201ENST00000228918 UBXN2AP68543 259 aa17.65■□□□□ 0.42
LTBR-201ENST00000228918 CEP55Q53EZ4 464 aa17.65■□□□□ 0.42
LTBR-201ENST00000228918 ODR4Q5SWX8 454 aa17.65■□□□□ 0.42
LTBR-201ENST00000228918 NAA35Q5VZE5 725 aa17.65■□□□□ 0.42
LTBR-201ENST00000228918 ARHGEF26Q96DR7 871 aa17.65■□□□□ 0.42
LTBR-201ENST00000228918 CELF4Q9BZC1 486 aaKnown RBP17.65■□□□□ 0.42
LTBR-201ENST00000228918 UNC45AQ9H3U1 944 aa17.65■□□□□ 0.42
LTBR-201ENST00000228918 BFSP1Q12934 665 aa17.65■□□□□ 0.42
LTBR-201ENST00000228918 PLS1Q14651 629 aa17.65■□□□□ 0.42
LTBR-201ENST00000228918 CCDC174Q6PII3 467 aa17.65■□□□□ 0.42
LTBR-201ENST00000228918 TMC3Q7Z5M5 1100 aa17.65■□□□□ 0.42
LTBR-201ENST00000228918 SLC9A9Q8IVB4 645 aa17.65■□□□□ 0.42
LTBR-201ENST00000228918 MICALL1Q8N3F8 863 aa17.65■□□□□ 0.42
LTBR-201ENST00000228918 ARFGAP2Q8N6H7 521 aa17.65■□□□□ 0.42
LTBR-201ENST00000228918 BANK1Q8NDB2 785 aa17.65■□□□□ 0.42
LTBR-201ENST00000228918 STRA6Q9BX79 667 aa17.65■□□□□ 0.42
LTBR-201ENST00000228918 WDR11Q9BZH6 1224 aa17.65■□□□□ 0.42
LTBR-201ENST00000228918 ARHGEF10LQ9HCE6 1279 aa17.65■□□□□ 0.42
LTBR-201ENST00000228918 FAM114A2Q9NRY5 505 aa17.65■□□□□ 0.42
LTBR-201ENST00000228918 DIS3Q9Y2L1 958 aaKnown RBP17.65■□□□□ 0.42
LTBR-201ENST00000228918 MYO1FO00160 1098 aa17.64■□□□□ 0.41
LTBR-201ENST00000228918 VIL1P09327 827 aaKnown RBP17.64■□□□□ 0.41
LTBR-201ENST00000228918 LIG3P49916 1009 aa17.64■□□□□ 0.41
LTBR-201ENST00000228918 KIF22Q14807 665 aa17.64■□□□□ 0.41
LTBR-201ENST00000228918 B3GNT9Q6UX72 402 aa17.64■□□□□ 0.41
LTBR-201ENST00000228918 SPATS2Q86XZ4 545 aaKnown RBP17.64■□□□□ 0.41
LTBR-201ENST00000228918 ACER1Q8TDN7 264 aa17.64■□□□□ 0.41
LTBR-201ENST00000228918 UBLCP1Q8WVY7 318 aaPredicted RBP17.64■□□□□ 0.41
LTBR-201ENST00000228918 NCAPGQ9BPX3 1015 aa17.64■□□□□ 0.41
LTBR-201ENST00000228918 ZNF577Q9BSK1 485 aa17.64■□□□□ 0.41
LTBR-201ENST00000228918 CARD9Q9H257 536 aa17.64■□□□□ 0.41
LTBR-201ENST00000228918 RANBP17Q9H2T7 1088 aaKnown RBP17.64■□□□□ 0.41
LTBR-201ENST00000228918 UTP11Q9Y3A2 253 aaKnown RBP17.64■□□□□ 0.41
LTBR-201ENST00000228918 ERLIN2O94905 339 aa17.64■□□□□ 0.41
LTBR-201ENST00000228918 RFX1P22670 979 aa17.64■□□□□ 0.41
LTBR-201ENST00000228918 HPDP32754 393 aaPredicted RBP17.64■□□□□ 0.41
LTBR-201ENST00000228918 PTENP60484 403 aa17.64■□□□□ 0.41
LTBR-201ENST00000228918 MAPK7Q13164 816 aa17.64■□□□□ 0.41
LTBR-201ENST00000228918 BIRC3Q13489 604 aa17.64■□□□□ 0.41
LTBR-201ENST00000228918 KCTD19Q17RG1 926 aaPredicted RBP17.64■□□□□ 0.41
LTBR-201ENST00000228918 RUFY4Q6ZNE9 571 aa17.64■□□□□ 0.41
LTBR-201ENST00000228918 NLRP14Q86W24 1093 aa17.64■□□□□ 0.41
LTBR-201ENST00000228918 PALB2Q86YC2 1186 aa17.64■□□□□ 0.41
LTBR-201ENST00000228918 LMO3Q8TAP4 145 aa17.64■□□□□ 0.41
LTBR-201ENST00000228918 ZNF473Q8WTR7 871 aaKnown RBP17.64■□□□□ 0.41
LTBR-201ENST00000228918 LXNQ9BS40 222 aa17.64■□□□□ 0.41
LTBR-201ENST00000228918 THAP2Q9H0W7 228 aa17.64■□□□□ 0.41
LTBR-201ENST00000228918 CENPHQ9H3R5 247 aa17.64■□□□□ 0.41
LTBR-201ENST00000228918 EHMT1Q9H9B1 1298 aa17.64■□□□□ 0.41
LTBR-201ENST00000228918 TAS2R14Q9NYV8 317 aa17.64■□□□□ 0.41
LTBR-201ENST00000228918 HERC5Q9UII4 1024 aaKnown RBP17.64■□□□□ 0.41
LTBR-201ENST00000228918 TMX2Q9Y320 296 aa17.64■□□□□ 0.41
LTBR-201ENST00000228918 NR2E1Q9Y466 385 aa17.64■□□□□ 0.41
LTBR-201ENST00000228918 EXOC3O60645 756 aa17.63■□□□□ 0.41
LTBR-201ENST00000228918 ARP10275 920 aa17.63■□□□□ 0.41
LTBR-201ENST00000228918 TNFAIP3P21580 790 aa17.63■□□□□ 0.41
LTBR-201ENST00000228918 SETQ01105 290 aaPredicted RBP17.63■□□□□ 0.41
LTBR-201ENST00000228918 ARHGAP44Q17R89 818 aa17.63■□□□□ 0.41
LTBR-201ENST00000228918 CC2D2BQ6DHV5 1058 aa17.63■□□□□ 0.41
LTBR-201ENST00000228918 PHLDB3Q6NSJ2 640 aa17.63■□□□□ 0.41
LTBR-201ENST00000228918 SUGP1Q8IWZ8 645 aaKnown RBP17.63■□□□□ 0.41
LTBR-201ENST00000228918 DAW1Q8N136 415 aa17.63■□□□□ 0.41
LTBR-201ENST00000228918 MYCBPAPQ8TBZ2 947 aa17.63■□□□□ 0.41
LTBR-201ENST00000228918 ATP8B4Q8TF62 1192 aa17.63■□□□□ 0.41
LTBR-201ENST00000228918 PRMT6Q96LA8 375 aaPredicted RBP17.63■□□□□ 0.41
LTBR-201ENST00000228918 DPH5Q9H2P9 285 aa17.63■□□□□ 0.41
LTBR-201ENST00000228918 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.63■□□□□ 0.41
LTBR-201ENST00000228918 SLC12A6Q9UHW9 1150 aa17.63■□□□□ 0.41
LTBR-201ENST00000228918 ANKRD62A6NC57 917 aa17.63■□□□□ 0.41
LTBR-201ENST00000228918 HIP1RO75146 1068 aa17.63■□□□□ 0.41
LTBR-201ENST00000228918 INPP5BP32019 993 aa17.63■□□□□ 0.41
LTBR-201ENST00000228918 AGBL2Q5U5Z8 902 aa17.63■□□□□ 0.41
LTBR-201ENST00000228918 TRIM51Q9BSJ1 452 aa17.63■□□□□ 0.41
LTBR-201ENST00000228918 TEKT3Q9BXF9 490 aa17.63■□□□□ 0.41
LTBR-201ENST00000228918 GOPCQ9HD26 462 aa17.63■□□□□ 0.41
LTBR-201ENST00000228918 COG5Q9UP83 839 aa17.63■□□□□ 0.41
LTBR-201ENST00000228918 LRRN2O75325 713 aa17.62■□□□□ 0.41
LTBR-201ENST00000228918 CHRM1P11229 460 aaPredicted RBP17.62■□□□□ 0.41
LTBR-201ENST00000228918 SEC24CP53992 1094 aa17.62■□□□□ 0.41
LTBR-201ENST00000228918 MYBPC2Q14324 1141 aa17.62■□□□□ 0.41
LTBR-201ENST00000228918 CCT8L2Q96SF2 557 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms