RNA–Protein interactions for RNA: ENST00000221166.9

NEFM-201, Transcript of neurofilament medium, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEFM, Length 4,020 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-201ENST00000221166 ALG6Q9Y672 507 aa12.08□□□□□ -0.47
NEFM-201ENST00000221166 GSTTP1A0A1W2PQM5 241 aa12.08□□□□□ -0.48
NEFM-201ENST00000221166 F8VZ95 297 aa12.08□□□□□ -0.48
NEFM-201ENST00000221166 SHBGP04278 402 aa12.08□□□□□ -0.48
NEFM-201ENST00000221166 FBXO25Q8TCJ0 367 aa12.08□□□□□ -0.48
NEFM-201ENST00000221166 PAIP2Q9BPZ3 127 aaKnown RBP12.08□□□□□ -0.48
NEFM-201ENST00000221166 ZNF577Q9BSK1 485 aa12.08□□□□□ -0.48
NEFM-201ENST00000221166 TDRD3Q9H7E2 651 aaKnown RBP12.08□□□□□ -0.48
NEFM-201ENST00000221166 SLC40A1Q9NP59 571 aa12.08□□□□□ -0.48
NEFM-201ENST00000221166 ASIC3Q9UHC3 531 aa12.08□□□□□ -0.48
NEFM-201ENST00000221166 MTUS1Q9ULD2 1270 aa12.08□□□□□ -0.48
NEFM-201ENST00000221166 CCDC169A6NNP5 214 aa12.08□□□□□ -0.48
NEFM-201ENST00000221166 CHN1P15882 459 aa12.08□□□□□ -0.48
NEFM-201ENST00000221166 SLC29A2Q14542 456 aa12.08□□□□□ -0.48
NEFM-201ENST00000221166 LRRC14Q15048 493 aa12.08□□□□□ -0.48
NEFM-201ENST00000221166 JAMLQ86YT9 394 aa12.08□□□□□ -0.48
NEFM-201ENST00000221166 RPUSD2Q8IZ73 545 aaKnown RBP12.08□□□□□ -0.48
NEFM-201ENST00000221166 CCDC197Q8NCU1 140 aa12.08□□□□□ -0.48
NEFM-201ENST00000221166 ELMO3Q96BJ8 720 aa12.08□□□□□ -0.48
NEFM-201ENST00000221166 BTBD6Q96KE9 485 aa12.08□□□□□ -0.48
NEFM-201ENST00000221166 ERP44Q9BS26 406 aa12.08□□□□□ -0.48
NEFM-201ENST00000221166 DBR1Q9UK59 544 aaKnown RBP12.08□□□□□ -0.48
NEFM-201ENST00000221166 ROBO1Q9Y6N7 1651 aa12.08□□□□□ -0.48
NEFM-201ENST00000221166 CLTAP09496 248 aa12.08□□□□□ -0.48
NEFM-201ENST00000221166 GYS1P13807 737 aa12.08□□□□□ -0.48
NEFM-201ENST00000221166 KIAA1755Q5JYT7 1200 aa12.08□□□□□ -0.48
NEFM-201ENST00000221166 HIBCHQ6NVY1 386 aaPredicted RBP12.08□□□□□ -0.48
NEFM-201ENST00000221166 PALB2Q86YC2 1186 aa12.08□□□□□ -0.48
NEFM-201ENST00000221166 ETNPPLQ8TBG4 499 aa12.08□□□□□ -0.48
NEFM-201ENST00000221166 TCP11Q8WWU5 503 aa12.08□□□□□ -0.48
NEFM-201ENST00000221166 HVCN1Q96D96 273 aa12.08□□□□□ -0.48
NEFM-201ENST00000221166 EMSYQ7Z589 1322 aa12.07□□□□□ -0.48
NEFM-201ENST00000221166 IGSF9BQ9UPX0 1349 aa12.07□□□□□ -0.48
NEFM-201ENST00000221166 TGFB1I1O43294 461 aa12.07□□□□□ -0.48
NEFM-201ENST00000221166 ACSL3O95573 720 aa12.07□□□□□ -0.48
NEFM-201ENST00000221166 NF2P35240 595 aa12.07□□□□□ -0.48
NEFM-201ENST00000221166 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.07□□□□□ -0.48
NEFM-201ENST00000221166 P2RX7Q99572 595 aaKnown RBP12.07□□□□□ -0.48
NEFM-201ENST00000221166 TISP43B9A030 160 aa12.07□□□□□ -0.48
NEFM-201ENST00000221166 TCP10L2B9ZVM9 353 aa12.07□□□□□ -0.48
NEFM-201ENST00000221166 SLC16A3O15427 465 aaKnown RBP12.07□□□□□ -0.48
NEFM-201ENST00000221166 TMEM253P0C7T8 217 aa12.07□□□□□ -0.48
NEFM-201ENST00000221166 POLR2MP0CAP2 368 aa12.07□□□□□ -0.48
NEFM-201ENST00000221166 KRT5P13647 590 aa12.07□□□□□ -0.48
NEFM-201ENST00000221166 PRKCIP41743 596 aa12.07□□□□□ -0.48
NEFM-201ENST00000221166 KCNV1Q6PIU1 500 aa12.07□□□□□ -0.48
NEFM-201ENST00000221166 CHMP6Q96FZ7 201 aa12.07□□□□□ -0.48
NEFM-201ENST00000221166 MYCBPQ99417 103 aaPredicted RBP12.07□□□□□ -0.48
NEFM-201ENST00000221166 AGPAT1Q99943 283 aa12.07□□□□□ -0.48
NEFM-201ENST00000221166 ERVK-5Q9HDB9 667 aa12.07□□□□□ -0.48
NEFM-201ENST00000221166 APEX2Q9UBZ4 518 aa12.07□□□□□ -0.48
NEFM-201ENST00000221166 IGKV6D-41A0A0C4DH26 115 aa12.07□□□□□ -0.48
NEFM-201ENST00000221166 UBAP1LF5GYI3 381 aa12.07□□□□□ -0.48
NEFM-201ENST00000221166 POLD1P28340 1107 aa12.07□□□□□ -0.48
NEFM-201ENST00000221166 SNCBQ16143 134 aa12.07□□□□□ -0.48
NEFM-201ENST00000221166 AGBL2Q5U5Z8 902 aa12.07□□□□□ -0.48
NEFM-201ENST00000221166 APOBEC3HQ6NTF7 200 aaKnown RBP12.07□□□□□ -0.48
NEFM-201ENST00000221166 XPO6Q96QU8 1125 aaKnown RBP12.07□□□□□ -0.48
NEFM-201ENST00000221166 NACC1Q96RE7 527 aa12.07□□□□□ -0.48
NEFM-201ENST00000221166 SIX2Q9NPC8 291 aa12.07□□□□□ -0.48
NEFM-201ENST00000221166 ACP6Q9NPH0 428 aa12.07□□□□□ -0.48
NEFM-201ENST00000221166 HOMER2Q9NSB8 354 aa12.07□□□□□ -0.48
NEFM-201ENST00000221166 TMEM59LQ9UK28 342 aa12.07□□□□□ -0.48
NEFM-201ENST00000221166 IFI35P80217 286 aaPredicted RBP12.06□□□□□ -0.48
NEFM-201ENST00000221166 C15orf52Q6ZUT6 534 aaKnown RBP12.06□□□□□ -0.48
NEFM-201ENST00000221166 CPXCR1Q8N123 301 aa12.06□□□□□ -0.48
NEFM-201ENST00000221166 CNPY4Q8N129 248 aa12.06□□□□□ -0.48
NEFM-201ENST00000221166 KRT35Q92764 455 aa12.06□□□□□ -0.48
NEFM-201ENST00000221166 AGPAT3Q9NRZ7 376 aa12.06□□□□□ -0.48
NEFM-201ENST00000221166 CTDP1Q9Y5B0 961 aaPredicted RBP12.06□□□□□ -0.48
NEFM-201ENST00000221166 TRAPPC3O43617 180 aa12.06□□□□□ -0.48
NEFM-201ENST00000221166 EIF3BP55884 814 aaKnown RBP12.06□□□□□ -0.48
NEFM-201ENST00000221166 NBPF9Q3BBW0 867 aa12.06□□□□□ -0.48
NEFM-201ENST00000221166 CCDC137Q6PK04 289 aaKnown RBP12.06□□□□□ -0.48
NEFM-201ENST00000221166 TMEM179Q6ZVK1 233 aa12.06□□□□□ -0.48
NEFM-201ENST00000221166 CCDC50Q8IVM0 306 aa12.06□□□□□ -0.48
NEFM-201ENST00000221166 SUGP1Q8IWZ8 645 aaKnown RBP12.06□□□□□ -0.48
NEFM-201ENST00000221166 CSRNP1Q96S65 589 aa12.06□□□□□ -0.48
NEFM-201ENST00000221166 PRMT1Q99873 361 aaKnown RBP12.06□□□□□ -0.48
NEFM-201ENST00000221166 SEMA4AQ9H3S1 761 aa12.06□□□□□ -0.48
NEFM-201ENST00000221166 VCPKMTQ9H867 229 aa12.06□□□□□ -0.48
NEFM-201ENST00000221166 LRRC4CQ9HCJ2 640 aa12.06□□□□□ -0.48
NEFM-201ENST00000221166 STK24Q9Y6E0 443 aa12.06□□□□□ -0.48
NEFM-201ENST00000221166 CLRN2A0PK11 232 aa12.06□□□□□ -0.48
NEFM-201ENST00000221166 ANKRD62A6NC57 917 aa12.06□□□□□ -0.48
NEFM-201ENST00000221166 RASGRF2O14827 1237 aa12.06□□□□□ -0.48
NEFM-201ENST00000221166 HIP1RO75146 1068 aa12.06□□□□□ -0.48
NEFM-201ENST00000221166 MARCKSL1P49006 195 aa12.06□□□□□ -0.48
NEFM-201ENST00000221166 ZKSCAN8Q15776 578 aaPredicted RBP12.06□□□□□ -0.48
NEFM-201ENST00000221166 FOXR2Q6PJQ5 311 aa12.06□□□□□ -0.48
NEFM-201ENST00000221166 MIER3Q7Z3K6 550 aa12.06□□□□□ -0.48
NEFM-201ENST00000221166 TBC1D1Q86TI0 1168 aaPredicted RBP12.06□□□□□ -0.48
NEFM-201ENST00000221166 PRPF38AQ8NAV1 312 aaKnown RBP12.06□□□□□ -0.48
NEFM-201ENST00000221166 ZNF653Q96CK0 615 aa12.06□□□□□ -0.48
NEFM-201ENST00000221166 MRRFQ96E11 262 aaKnown RBP12.06□□□□□ -0.48
NEFM-201ENST00000221166 LRRC4BQ9NT99 713 aa12.06□□□□□ -0.48
NEFM-201ENST00000221166 TMOD2Q9NZR1 351 aa12.06□□□□□ -0.48
NEFM-201ENST00000221166 NYAP2Q9P242 653 aa12.06□□□□□ -0.48
NEFM-201ENST00000221166 CES2O00748 559 aa12.05□□□□□ -0.48
NEFM-201ENST00000221166 CHUKO15111 745 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms