RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 SRRM3A6NNA2 597 aaPredicted RBP18.74■□□□□ 0.59
USB1-201ENST00000219281 H0YHG0 523 aa18.74■□□□□ 0.59
USB1-201ENST00000219281 OPLAHO14841 1288 aa18.74■□□□□ 0.59
USB1-201ENST00000219281 DDX3YO15523 660 aaKnown RBP18.74■□□□□ 0.59
USB1-201ENST00000219281 CHMP2AO43633 222 aa18.74■□□□□ 0.59
USB1-201ENST00000219281 FSBPO95073 299 aa18.74■□□□□ 0.59
USB1-201ENST00000219281 NDUFB10O96000 172 aa18.74■□□□□ 0.59
USB1-201ENST00000219281 MMP14P50281 582 aa18.74■□□□□ 0.59
USB1-201ENST00000219281 POU5F1Q01860 360 aaKnown RBP18.74■□□□□ 0.59
USB1-201ENST00000219281 DCAF12L1Q5VU92 463 aa18.74■□□□□ 0.59
USB1-201ENST00000219281 ADAT2Q7Z6V5 191 aaKnown RBP18.74■□□□□ 0.59
USB1-201ENST00000219281 YTHDF3Q7Z739 585 aaKnown RBP18.74■□□□□ 0.59
USB1-201ENST00000219281 RFFLQ8WZ73 363 aa18.74■□□□□ 0.59
USB1-201ENST00000219281 SEC14L1Q92503 715 aa18.74■□□□□ 0.59
USB1-201ENST00000219281 CYFIP2Q96F07 1278 aa18.74■□□□□ 0.59
USB1-201ENST00000219281 DYDC2Q96IM9 177 aa18.74■□□□□ 0.59
USB1-201ENST00000219281 FAM114A2Q9NRY5 505 aa18.74■□□□□ 0.59
USB1-201ENST00000219281 GMNCA6NCL1 334 aa18.74■□□□□ 0.59
USB1-201ENST00000219281 EIF3DO15371 548 aaKnown RBP eCLIP18.74■□□□□ 0.59
USB1-201ENST00000219281 TMEM253P0C7T8 217 aa18.74■□□□□ 0.59
USB1-201ENST00000219281 RRP1BQ14684 758 aaKnown RBP18.74■□□□□ 0.59
USB1-201ENST00000219281 CBWD6Q4V339 395 aa18.74■□□□□ 0.59
USB1-201ENST00000219281 CBWD3Q5JTY5 395 aa18.74■□□□□ 0.59
USB1-201ENST00000219281 CBWD5Q5RIA9 395 aa18.74■□□□□ 0.59
USB1-201ENST00000219281 AGBL2Q5U5Z8 902 aa18.74■□□□□ 0.59
USB1-201ENST00000219281 CC2D2BQ6DHV5 1058 aa18.74■□□□□ 0.59
USB1-201ENST00000219281 PRPF38AQ8NAV1 312 aaKnown RBP18.74■□□□□ 0.59
USB1-201ENST00000219281 CTNNBL1Q8WYA6 563 aaPredicted RBP18.74■□□□□ 0.59
USB1-201ENST00000219281 LRRC4CQ9HCJ2 640 aa18.74■□□□□ 0.59
USB1-201ENST00000219281 NCANO14594 1321 aa18.74■□□□□ 0.59
USB1-201ENST00000219281 SLITRK3O94933 977 aa18.73■□□□□ 0.59
USB1-201ENST00000219281 COPB2P35606 906 aa18.73■□□□□ 0.59
USB1-201ENST00000219281 CYP2J2P51589 502 aa18.73■□□□□ 0.59
USB1-201ENST00000219281 PPP2R2AP63151 447 aa18.73■□□□□ 0.59
USB1-201ENST00000219281 PPATQ06203 517 aa18.73■□□□□ 0.59
USB1-201ENST00000219281 C1orf186Q6ZWK4 172 aa18.73■□□□□ 0.59
USB1-201ENST00000219281 ARHGEF26Q96DR7 871 aa18.73■□□□□ 0.59
USB1-201ENST00000219281 HSD17B14Q9BPX1 270 aa18.73■□□□□ 0.59
USB1-201ENST00000219281 GPR88Q9GZN0 384 aa18.73■□□□□ 0.59
USB1-201ENST00000219281 SEPT11Q9NVA2 429 aaKnown RBP18.73■□□□□ 0.59
USB1-201ENST00000219281 TTC7AQ9ULT0 858 aaPredicted RBP18.73■□□□□ 0.59
USB1-201ENST00000219281 DCDC2CA8MYV0 355 aa18.72■□□□□ 0.59
USB1-201ENST00000219281 TRIM49P0CI25 452 aa18.72■□□□□ 0.59
USB1-201ENST00000219281 TRIM49CP0CI26 452 aa18.72■□□□□ 0.59
USB1-201ENST00000219281 MAGOHP61326 146 aaKnown RBP18.72■□□□□ 0.59
USB1-201ENST00000219281 KRT71Q3SY84 523 aa18.72■□□□□ 0.59
USB1-201ENST00000219281 MAGOHBQ96A72 148 aaKnown RBP18.72■□□□□ 0.59
USB1-201ENST00000219281 TAS2R14Q9NYV8 317 aa18.72■□□□□ 0.59
USB1-201ENST00000219281 TRAPPC3O43617 180 aa18.72■□□□□ 0.59
USB1-201ENST00000219281 CYP3A4P08684 503 aa18.72■□□□□ 0.59
USB1-201ENST00000219281 GUCY2CP25092 1073 aa18.72■□□□□ 0.59
USB1-201ENST00000219281 ZNF211Q13398 564 aaPredicted RBP18.72■□□□□ 0.59
USB1-201ENST00000219281 PLS1Q14651 629 aa18.72■□□□□ 0.59
USB1-201ENST00000219281 TMEM179Q6ZVK1 233 aa18.72■□□□□ 0.59
USB1-201ENST00000219281 OTOP1Q7RTM1 612 aa18.72■□□□□ 0.59
USB1-201ENST00000219281 PLCD3Q8N3E9 789 aa18.72■□□□□ 0.59
USB1-201ENST00000219281 ATP8B4Q8TF62 1192 aa18.72■□□□□ 0.59
USB1-201ENST00000219281 SYT11Q9BT88 431 aa18.72■□□□□ 0.59
USB1-201ENST00000219281 INTS2Q9H0H0 1204 aaKnown RBP18.72■□□□□ 0.59
USB1-201ENST00000219281 PARVGQ9HBI0 331 aa18.72■□□□□ 0.59
USB1-201ENST00000219281 ATP8A1Q9Y2Q0 1164 aa18.72■□□□□ 0.59
USB1-201ENST00000219281 IGLV3-22A0A075B6J6 115 aa18.71■□□□□ 0.59
USB1-201ENST00000219281 TNFAIP3P21580 790 aa18.71■□□□□ 0.59
USB1-201ENST00000219281 ARHGAP44Q17R89 818 aa18.71■□□□□ 0.59
USB1-201ENST00000219281 ABCB5Q2M3G0 1257 aa18.71■□□□□ 0.59
USB1-201ENST00000219281 GMCL1P1Q8NEA9 526 aa18.71■□□□□ 0.59
USB1-201ENST00000219281 SUPT20HQ8NEM7 779 aa18.71■□□□□ 0.59
USB1-201ENST00000219281 GMCL1Q96IK5 515 aa18.71■□□□□ 0.59
USB1-201ENST00000219281 WDR18Q9BV38 432 aa18.71■□□□□ 0.59
USB1-201ENST00000219281 THAP2Q9H0W7 228 aa18.71■□□□□ 0.59
USB1-201ENST00000219281 GGA2Q9UJY4 613 aa18.71■□□□□ 0.59
USB1-201ENST00000219281 ENTPD3O75355 529 aa18.71■□□□□ 0.59
USB1-201ENST00000219281 BMP3P12645 472 aa18.71■□□□□ 0.59
USB1-201ENST00000219281 KCNA3P22001 575 aa18.71■□□□□ 0.59
USB1-201ENST00000219281 PTENP60484 403 aa18.71■□□□□ 0.59
USB1-201ENST00000219281 DR1Q01658 176 aa18.71■□□□□ 0.59
USB1-201ENST00000219281 IFFO1Q0D2I5 559 aa18.71■□□□□ 0.59
USB1-201ENST00000219281 NFIL3Q16649 462 aa18.71■□□□□ 0.59
USB1-201ENST00000219281 QPCTQ16769 361 aa18.71■□□□□ 0.59
USB1-201ENST00000219281 C6orf89Q6UWU4 347 aa18.71■□□□□ 0.59
USB1-201ENST00000219281 ZNF720Q7Z2F6 126 aa18.71■□□□□ 0.59
USB1-201ENST00000219281 IPO4Q8TEX9 1081 aaKnown RBP18.71■□□□□ 0.59
USB1-201ENST00000219281 FMO2Q99518 471 aa18.71■□□□□ 0.59
USB1-201ENST00000219281 MKNK1Q9BUB5 465 aa18.71■□□□□ 0.59
USB1-201ENST00000219281 ERVK-5Q9HDB9 667 aa18.71■□□□□ 0.59
USB1-201ENST00000219281 TUFT1Q9NNX1 390 aa18.71■□□□□ 0.59
USB1-201ENST00000219281 DDX20Q9UHI6 824 aaKnown RBP18.71■□□□□ 0.59
USB1-201ENST00000219281 FRMD4BQ9Y2L6 1034 aa18.71■□□□□ 0.59
USB1-201ENST00000219281 ATRNL1Q5VV63 1379 aa18.7■□□□□ 0.58
USB1-201ENST00000219281 BACH1O14867 736 aa18.7■□□□□ 0.58
USB1-201ENST00000219281 LRCH2Q5VUJ6 765 aa18.7■□□□□ 0.58
USB1-201ENST00000219281 PALB2Q86YC2 1186 aa18.7■□□□□ 0.58
USB1-201ENST00000219281 RAPGEF5Q92565 580 aa18.7■□□□□ 0.58
USB1-201ENST00000219281 FIZ1Q96SL8 496 aa18.7■□□□□ 0.58
USB1-201ENST00000219281 RAB17Q9H0T7 212 aa18.7■□□□□ 0.58
USB1-201ENST00000219281 AGPAT3Q9NRZ7 376 aa18.7■□□□□ 0.58
USB1-201ENST00000219281 DIS3Q9Y2L1 958 aaKnown RBP18.7■□□□□ 0.58
USB1-201ENST00000219281 MNAT1P51948 309 aa18.7■□□□□ 0.58
USB1-201ENST00000219281 HS2ST1Q7LGA3 356 aa18.7■□□□□ 0.58
USB1-201ENST00000219281 FAM178BQ8IXR5 827 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms