RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 ZNF131P52739 623 aa14.79□□□□□ -0.04
SIX4-201ENST00000216513 ST8SIA6P61647 398 aa14.79□□□□□ -0.04
SIX4-201ENST00000216513 FKBP3Q00688 224 aaKnown RBP14.79□□□□□ -0.04
SIX4-201ENST00000216513 SNX1Q13596 522 aa14.79□□□□□ -0.04
SIX4-201ENST00000216513 MYLK4Q86YV6 388 aaPredicted RBP14.79□□□□□ -0.04
SIX4-201ENST00000216513 MAIP1Q8WWC4 291 aa14.79□□□□□ -0.04
SIX4-201ENST00000216513 HSPH1Q92598 858 aa14.79□□□□□ -0.04
SIX4-201ENST00000216513 KLK14Q9P0G3 267 aa14.79□□□□□ -0.04
SIX4-201ENST00000216513 ICAM1P05362 532 aa14.79□□□□□ -0.04
SIX4-201ENST00000216513 GCLMP48507 274 aa14.79□□□□□ -0.04
SIX4-201ENST00000216513 DENND2CQ68D51 928 aa14.79□□□□□ -0.04
SIX4-201ENST00000216513 LMBRD2Q68DH5 695 aaPredicted RBP14.79□□□□□ -0.04
SIX4-201ENST00000216513 TAOK1Q7L7X3 1001 aa14.79□□□□□ -0.04
SIX4-201ENST00000216513 HAUS6Q7Z4H7 955 aa14.79□□□□□ -0.04
SIX4-201ENST00000216513 DOLKQ9UPQ8 538 aa14.79□□□□□ -0.04
SIX4-201ENST00000216513 M0QYV0 167 aa14.79□□□□□ -0.04
SIX4-201ENST00000216513 KIAA1586Q9HCI6 787 aa14.79□□□□□ -0.04
SIX4-201ENST00000216513 AGO2Q9UKV8 859 aaKnown RBP14.79□□□□□ -0.04
SIX4-201ENST00000216513 PHLPP1O60346 1717 aa14.79□□□□□ -0.04
SIX4-201ENST00000216513 BRD1O95696 1058 aa14.79□□□□□ -0.04
SIX4-201ENST00000216513 NECTIN1Q15223 517 aa14.79□□□□□ -0.04
SIX4-201ENST00000216513 FAM83AQ86UY5 434 aa14.79□□□□□ -0.04
SIX4-201ENST00000216513 EFCAB13Q8IY85 973 aa14.79□□□□□ -0.04
SIX4-201ENST00000216513 FAM81BQ96LP2 452 aa14.79□□□□□ -0.04
SIX4-201ENST00000216513 SH3BP1Q9Y3L3 701 aa14.79□□□□□ -0.04
SIX4-201ENST00000216513 EMC2Q15006 297 aa14.78□□□□□ -0.04
SIX4-201ENST00000216513 TTC1Q99614 292 aa14.78□□□□□ -0.04
SIX4-201ENST00000216513 MB21D2Q8IYB1 491 aaPredicted RBP14.78□□□□□ -0.04
SIX4-201ENST00000216513 RPUSD2Q8IZ73 545 aaKnown RBP14.78□□□□□ -0.04
SIX4-201ENST00000216513 XXYLT1Q8NBI6 393 aa14.78□□□□□ -0.04
SIX4-201ENST00000216513 ZNF148Q9UQR1 794 aa14.78□□□□□ -0.04
SIX4-201ENST00000216513 DACT2Q5SW24 774 aa14.78□□□□□ -0.04
SIX4-201ENST00000216513 TMTC1Q8IUR5 882 aa14.78□□□□□ -0.04
SIX4-201ENST00000216513 DNAAF3Q8N9W5 541 aa14.78□□□□□ -0.04
SIX4-201ENST00000216513 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.78□□□□□ -0.04
SIX4-201ENST00000216513 MTG1Q9BT17 334 aaPredicted RBP14.78□□□□□ -0.04
SIX4-201ENST00000216513 COLEC11Q9BWP8 271 aa14.78□□□□□ -0.04
SIX4-201ENST00000216513 ZWILCHQ9H900 591 aa14.78□□□□□ -0.04
SIX4-201ENST00000216513 TUBE1Q9UJT0 475 aa14.78□□□□□ -0.04
SIX4-201ENST00000216513 ZC3H4Q9UPT8 1303 aaKnown RBP14.78□□□□□ -0.04
SIX4-201ENST00000216513 F5H423 210 aaPredicted RBP14.78□□□□□ -0.04
SIX4-201ENST00000216513 GMNNO75496 209 aa14.78□□□□□ -0.04
SIX4-201ENST00000216513 ERVK-9P63128 1117 aa14.78□□□□□ -0.04
SIX4-201ENST00000216513 ERVK-24P63145 666 aa14.78□□□□□ -0.04
SIX4-201ENST00000216513 HDXQ7Z353 690 aa14.78□□□□□ -0.04
SIX4-201ENST00000216513 APPL2Q8NEU8 664 aa14.78□□□□□ -0.04
SIX4-201ENST00000216513 SCYL1Q96KG9 808 aa14.78□□□□□ -0.04
SIX4-201ENST00000216513 SIK2Q9H0K1 926 aa14.78□□□□□ -0.04
SIX4-201ENST00000216513 SLIT1O75093 1534 aa14.78□□□□□ -0.04
SIX4-201ENST00000216513 AMHP03971 560 aa14.78□□□□□ -0.04
SIX4-201ENST00000216513 S100BP04271 92 aaPredicted RBP14.78□□□□□ -0.04
SIX4-201ENST00000216513 ALDH3A1P30838 453 aa14.78□□□□□ -0.04
SIX4-201ENST00000216513 DPCR1Q3MIW9 517 aa14.78□□□□□ -0.04
SIX4-201ENST00000216513 TMEM270Q6UE05 265 aa14.78□□□□□ -0.04
SIX4-201ENST00000216513 CEP128Q6ZU80 1094 aa14.78□□□□□ -0.04
SIX4-201ENST00000216513 RAD54LQ92698 747 aa14.78□□□□□ -0.04
SIX4-201ENST00000216513 SMC6Q96SB8 1091 aa14.78□□□□□ -0.04
SIX4-201ENST00000216513 STK38LQ9Y2H1 464 aa14.78□□□□□ -0.04
SIX4-201ENST00000216513 LCP1P13796 627 aa14.77□□□□□ -0.04
SIX4-201ENST00000216513 BTG3Q14201 252 aaPredicted RBP14.77□□□□□ -0.04
SIX4-201ENST00000216513 DHTKD1Q96HY7 919 aaPredicted RBP14.77□□□□□ -0.04
SIX4-201ENST00000216513 TMEM131LA2VDJ0 1609 aa14.77□□□□□ -0.04
SIX4-201ENST00000216513 TBKBP1A7MCY6 615 aa14.77□□□□□ -0.04
SIX4-201ENST00000216513 PPIL2Q13356 520 aa14.77□□□□□ -0.04
SIX4-201ENST00000216513 ARID5BQ14865 1188 aa14.77□□□□□ -0.04
SIX4-201ENST00000216513 CD99L2Q8TCZ2 262 aa14.77□□□□□ -0.04
SIX4-201ENST00000216513 KRT12Q99456 494 aa14.77□□□□□ -0.04
SIX4-201ENST00000216513 MOV10L1Q9BXT6 1211 aaKnown RBP14.77□□□□□ -0.04
SIX4-201ENST00000216513 AGAP1Q9UPQ3 857 aa14.77□□□□□ -0.04
SIX4-201ENST00000216513 OAS2P29728 719 aaKnown RBP14.77□□□□□ -0.05
SIX4-201ENST00000216513 PPP6R3Q5H9R7 873 aaPredicted RBP14.77□□□□□ -0.05
SIX4-201ENST00000216513 KCTD16Q68DU8 428 aa14.77□□□□□ -0.05
SIX4-201ENST00000216513 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.77□□□□□ -0.05
SIX4-201ENST00000216513 BCORL1Q5H9F3 1711 aa14.77□□□□□ -0.05
SIX4-201ENST00000216513 KRT1P04264 644 aa14.77□□□□□ -0.05
SIX4-201ENST00000216513 ADCY8P40145 1251 aa14.77□□□□□ -0.05
SIX4-201ENST00000216513 ZNF658Q5TYW1 1059 aaPredicted RBP14.77□□□□□ -0.05
SIX4-201ENST00000216513 SNX9Q9Y5X1 595 aa14.77□□□□□ -0.05
SIX4-201ENST00000216513 RGS12O14924 1447 aa14.77□□□□□ -0.05
SIX4-201ENST00000216513 IRF6O14896 467 aa14.77□□□□□ -0.05
SIX4-201ENST00000216513 APOEP02649 317 aa14.77□□□□□ -0.05
SIX4-201ENST00000216513 URODP06132 367 aa14.77□□□□□ -0.05
SIX4-201ENST00000216513 IL1R1P14778 569 aa14.77□□□□□ -0.05
SIX4-201ENST00000216513 BEX3Q00994 111 aa14.77□□□□□ -0.05
SIX4-201ENST00000216513 TAF1DQ9H5J8 278 aaPredicted RBP14.77□□□□□ -0.05
SIX4-201ENST00000216513 SRPRBQ9Y5M8 271 aaKnown RBP14.77□□□□□ -0.05
SIX4-201ENST00000216513 SGK1O00141 431 aa14.76□□□□□ -0.05
SIX4-201ENST00000216513 MAP3K7O43318 606 aa14.76□□□□□ -0.05
SIX4-201ENST00000216513 CREB3O43889 395 aa14.76□□□□□ -0.05
SIX4-201ENST00000216513 H2AFZP0C0S5 128 aa14.76□□□□□ -0.05
SIX4-201ENST00000216513 KYAT1Q16773 422 aa14.76□□□□□ -0.05
SIX4-201ENST00000216513 PRAMEF19Q5SWL8 479 aa14.76□□□□□ -0.05
SIX4-201ENST00000216513 GJC2Q5T442 439 aaPredicted RBP14.76□□□□□ -0.05
SIX4-201ENST00000216513 H2AFVQ71UI9 128 aa14.76□□□□□ -0.05
SIX4-201ENST00000216513 TLK2Q86UE8 772 aa14.76□□□□□ -0.05
SIX4-201ENST00000216513 JMJD4Q9H9V9 463 aa14.76□□□□□ -0.05
SIX4-201ENST00000216513 PPP1R9AQ9ULJ8 1098 aa14.76□□□□□ -0.05
SIX4-201ENST00000216513 PDGFRBP09619 1106 aa14.76□□□□□ -0.05
SIX4-201ENST00000216513 KIZQ2M2Z5 673 aa14.76□□□□□ -0.05
SIX4-201ENST00000216513 AFAP1L1Q8TED9 768 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms