RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 STK36Q9NRP7 1315 aa16.84■□□□□ 0.29
UPK3A-201ENST00000216211 A0A0U1RQF3 1178 aa16.83■□□□□ 0.28
UPK3A-201ENST00000216211 PFKFB2O60825 505 aa16.83■□□□□ 0.28
UPK3A-201ENST00000216211 MAFO75444 373 aaPredicted RBP16.83■□□□□ 0.28
UPK3A-201ENST00000216211 ATF7P17544 494 aaPredicted RBP16.83■□□□□ 0.28
UPK3A-201ENST00000216211 DNM2P50570 870 aa16.83■□□□□ 0.28
UPK3A-201ENST00000216211 PSMC5P62195 406 aa16.83■□□□□ 0.28
UPK3A-201ENST00000216211 PLCB3Q01970 1234 aa16.83■□□□□ 0.28
UPK3A-201ENST00000216211 DUSP6Q16828 381 aa16.83■□□□□ 0.28
UPK3A-201ENST00000216211 NEK8Q86SG6 692 aa16.83■□□□□ 0.28
UPK3A-201ENST00000216211 ZNF598Q86UK7 904 aaKnown RBP16.83■□□□□ 0.28
UPK3A-201ENST00000216211 RHPN2Q8IUC4 686 aa16.83■□□□□ 0.28
UPK3A-201ENST00000216211 LRRC43Q8N309 656 aa16.83■□□□□ 0.28
UPK3A-201ENST00000216211 VN1R2Q8NFZ6 395 aa16.83■□□□□ 0.28
UPK3A-201ENST00000216211 ZNF558Q96NG5 402 aa16.83■□□□□ 0.28
UPK3A-201ENST00000216211 VAV3Q9UKW4 847 aa16.83■□□□□ 0.28
UPK3A-201ENST00000216211 LZTS1Q9Y250 596 aa16.83■□□□□ 0.28
UPK3A-201ENST00000216211 CCNT1O60563 726 aaKnown RBP16.82■□□□□ 0.28
UPK3A-201ENST00000216211 CTDNEP1O95476 244 aa16.82■□□□□ 0.28
UPK3A-201ENST00000216211 EOMESO95936 686 aa16.82■□□□□ 0.28
UPK3A-201ENST00000216211 XBP1P17861 261 aa16.82■□□□□ 0.28
UPK3A-201ENST00000216211 AK2P54819 239 aa16.82■□□□□ 0.28
UPK3A-201ENST00000216211 NPEPPSP55786 919 aa16.82■□□□□ 0.28
UPK3A-201ENST00000216211 CDC42EP1Q00587 391 aa16.82■□□□□ 0.28
UPK3A-201ENST00000216211 PPP2R5CQ13362 524 aa16.82■□□□□ 0.28
UPK3A-201ENST00000216211 PDE12Q6L8Q7 609 aaKnown RBP16.82■□□□□ 0.28
UPK3A-201ENST00000216211 PIK3AP1Q6ZUJ8 805 aa16.82■□□□□ 0.28
UPK3A-201ENST00000216211 KSR1Q8IVT5 923 aa16.82■□□□□ 0.28
UPK3A-201ENST00000216211 FAM20AQ96MK3 541 aa16.82■□□□□ 0.28
UPK3A-201ENST00000216211 CDCA3Q99618 268 aaPredicted RBP16.82■□□□□ 0.28
UPK3A-201ENST00000216211 TCF25Q9BQ70 676 aa16.82■□□□□ 0.28
UPK3A-201ENST00000216211 KCNMB3Q9NPA1 279 aa16.82■□□□□ 0.28
UPK3A-201ENST00000216211 ENTPD7Q9NQZ7 604 aa16.82■□□□□ 0.28
UPK3A-201ENST00000216211 DACT1Q9NYF0 836 aa16.82■□□□□ 0.28
UPK3A-201ENST00000216211 PUF60Q9UHX1 559 aaKnown RBP16.82■□□□□ 0.28
UPK3A-201ENST00000216211 MUTYHQ9UIF7 546 aa16.82■□□□□ 0.28
UPK3A-201ENST00000216211 USP15Q9Y4E8 981 aaPredicted RBP16.82■□□□□ 0.28
UPK3A-201ENST00000216211 SFPQP23246 707 aaKnown RBP eCLIP16.81■□□□□ 0.28
UPK3A-201ENST00000216211 PPM1AP35813 382 aa16.81■□□□□ 0.28
UPK3A-201ENST00000216211 QARSP47897 775 aaKnown RBP16.81■□□□□ 0.28
UPK3A-201ENST00000216211 LONRF3Q496Y0 759 aa16.81■□□□□ 0.28
UPK3A-201ENST00000216211 EARS2Q5JPH6 523 aaKnown RBP16.81■□□□□ 0.28
UPK3A-201ENST00000216211 PPP4R3AQ6IN85 833 aa16.81■□□□□ 0.28
UPK3A-201ENST00000216211 ZNF410Q86VK4 478 aa16.81■□□□□ 0.28
UPK3A-201ENST00000216211 RNF135Q8IUD6 432 aa16.81■□□□□ 0.28
UPK3A-201ENST00000216211 ZNF579Q8NAF0 562 aaKnown RBP16.81■□□□□ 0.28
UPK3A-201ENST00000216211 HAS1Q92839 578 aa16.81■□□□□ 0.28
UPK3A-201ENST00000216211 NLRP4Q96MN2 994 aa16.81■□□□□ 0.28
UPK3A-201ENST00000216211 CYP26B1Q9NR63 512 aa16.81■□□□□ 0.28
UPK3A-201ENST00000216211 CHST12Q9NRB3 414 aa16.81■□□□□ 0.28
UPK3A-201ENST00000216211 WRAP73Q9P2S5 460 aaPredicted RBP16.81■□□□□ 0.28
UPK3A-201ENST00000216211 ARIH1Q9Y4X5 557 aaPredicted RBP16.81■□□□□ 0.28
UPK3A-201ENST00000216211 FAM205CA6NFA0 338 aa16.8■□□□□ 0.28
UPK3A-201ENST00000216211 HIDE1A8MVS5 230 aa16.8■□□□□ 0.28
UPK3A-201ENST00000216211 P4HBP07237 508 aaKnown RBP16.8■□□□□ 0.28
UPK3A-201ENST00000216211 GCFC2P16383 781 aaKnown RBP16.8■□□□□ 0.28
UPK3A-201ENST00000216211 PHKA2P46019 1235 aa16.8■□□□□ 0.28
UPK3A-201ENST00000216211 KRT17Q04695 432 aa16.8■□□□□ 0.28
UPK3A-201ENST00000216211 TWF2Q6IBS0 349 aaKnown RBP16.8■□□□□ 0.28
UPK3A-201ENST00000216211 LLGL2Q6P1M3 1020 aa16.8■□□□□ 0.28
UPK3A-201ENST00000216211 TMC7Q7Z402 723 aa16.8■□□□□ 0.28
UPK3A-201ENST00000216211 POTEDQ86YR6 584 aa16.8■□□□□ 0.28
UPK3A-201ENST00000216211 LPPQ93052 612 aa16.8■□□□□ 0.28
UPK3A-201ENST00000216211 JPH2Q9BR39 696 aaPredicted RBP16.8■□□□□ 0.28
UPK3A-201ENST00000216211 INO80BQ9C086 356 aaPredicted RBP16.8■□□□□ 0.28
UPK3A-201ENST00000216211 SPG21Q9NZD8 308 aa16.8■□□□□ 0.28
UPK3A-201ENST00000216211 ORC3Q9UBD5 711 aaPredicted RBP16.8■□□□□ 0.28
UPK3A-201ENST00000216211 PIN4Q9Y237 131 aaKnown RBP16.8■□□□□ 0.28
UPK3A-201ENST00000216211 FSD2A1L4K1 749 aa16.79■□□□□ 0.28
UPK3A-201ENST00000216211 NT5C1B-RDH14C9J2C7 533 aa16.79■□□□□ 0.28
UPK3A-201ENST00000216211 MARCH6O60337 910 aa16.79■□□□□ 0.28
UPK3A-201ENST00000216211 LARGE1O95461 756 aa16.79■□□□□ 0.28
UPK3A-201ENST00000216211 TECP42680 631 aa16.79■□□□□ 0.28
UPK3A-201ENST00000216211 BCAR1P56945 870 aa16.79■□□□□ 0.28
UPK3A-201ENST00000216211 ANAPC15P60006 121 aa16.79■□□□□ 0.28
UPK3A-201ENST00000216211 KCNC3Q14003 757 aa16.79■□□□□ 0.28
UPK3A-201ENST00000216211 HERC4Q5GLZ8 1057 aaPredicted RBP16.79■□□□□ 0.28
UPK3A-201ENST00000216211 NCAPH2Q6IBW4 605 aa16.79■□□□□ 0.28
UPK3A-201ENST00000216211 CATSPER4Q7RTX7 472 aa16.79■□□□□ 0.28
UPK3A-201ENST00000216211 SLC39A11Q8N1S5 342 aa16.79■□□□□ 0.28
UPK3A-201ENST00000216211 NECAB1Q8N987 351 aa16.79■□□□□ 0.28
UPK3A-201ENST00000216211 CEP170P1Q96L14 293 aa16.79■□□□□ 0.28
UPK3A-201ENST00000216211 MRPL9Q9BYD2 267 aaKnown RBP16.79■□□□□ 0.28
UPK3A-201ENST00000216211 NGRNQ9NPE2 291 aaKnown RBP16.79■□□□□ 0.28
UPK3A-201ENST00000216211 BMP2KQ9NSY1 1161 aaPredicted RBP16.79■□□□□ 0.28
UPK3A-201ENST00000216211 MEIS3P2A8K0S8 358 aa16.78■□□□□ 0.28
UPK3A-201ENST00000216211 LOC730098B7Z3J9 87 aa16.78■□□□□ 0.28
UPK3A-201ENST00000216211 TBX3O15119 743 aa16.78■□□□□ 0.28
UPK3A-201ENST00000216211 DKC1O60832 514 aaKnown RBP eCLIP16.78■□□□□ 0.281e-6■■■■■ 48.7
UPK3A-201ENST00000216211 FDPSP14324 419 aaKnown RBP16.78■□□□□ 0.28
UPK3A-201ENST00000216211 POLGP54098 1239 aaPredicted RBP16.78■□□□□ 0.28
UPK3A-201ENST00000216211 NR5A1Q13285 461 aa16.78■□□□□ 0.28
UPK3A-201ENST00000216211 ANKRD1Q15327 319 aa16.78■□□□□ 0.28
UPK3A-201ENST00000216211 EPHA7Q15375 998 aa16.78■□□□□ 0.28
UPK3A-201ENST00000216211 ME3Q16798 604 aa16.78■□□□□ 0.28
UPK3A-201ENST00000216211 ANKRD54Q6NXT1 300 aa16.78■□□□□ 0.28
UPK3A-201ENST00000216211 SLC7A3Q8WY07 619 aa16.78■□□□□ 0.28
UPK3A-201ENST00000216211 WASF1Q92558 559 aa16.78■□□□□ 0.28
UPK3A-201ENST00000216211 TMEM143Q96AN5 459 aa16.78■□□□□ 0.28
UPK3A-201ENST00000216211 DYDC2Q96IM9 177 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms