RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 MRFAP1Q9Y605 127 aa14.54□□□□□ -0.08
TGFBR3-201ENST00000212355 LGALS16A8MUM7 142 aa14.54□□□□□ -0.08
TGFBR3-201ENST00000212355 KRT10P13645 584 aa14.54□□□□□ -0.08
TGFBR3-201ENST00000212355 PFKFB3Q16875 520 aaPredicted RBP14.54□□□□□ -0.08
TGFBR3-201ENST00000212355 CRLF3Q8IUI8 442 aa14.54□□□□□ -0.08
TGFBR3-201ENST00000212355 GLYCTKQ8IVS8 523 aa14.54□□□□□ -0.08
TGFBR3-201ENST00000212355 FBXL13Q8NEE6 735 aa14.54□□□□□ -0.08
TGFBR3-201ENST00000212355 SUGT1Q9Y2Z0 365 aa14.54□□□□□ -0.08
TGFBR3-201ENST00000212355 ZHX2Q9Y6X8 837 aa14.54□□□□□ -0.08
TGFBR3-201ENST00000212355 MYO1CO00159 1063 aa14.54□□□□□ -0.08
TGFBR3-201ENST00000212355 C1orf146Q5VVC0 180 aa14.54□□□□□ -0.08
TGFBR3-201ENST00000212355 STOX1Q6ZVD7 989 aa14.54□□□□□ -0.08
TGFBR3-201ENST00000212355 TGS1Q96RS0 853 aaKnown RBP14.54□□□□□ -0.08
TGFBR3-201ENST00000212355 RGL1Q9NZL6 768 aa14.54□□□□□ -0.08
TGFBR3-201ENST00000212355 ZNF568Q3ZCX4 644 aa14.54□□□□□ -0.08
TGFBR3-201ENST00000212355 UNC13DQ70J99 1090 aa14.54□□□□□ -0.08
TGFBR3-201ENST00000212355 TTC1Q99614 292 aa14.54□□□□□ -0.08
TGFBR3-201ENST00000212355 INTS2Q9H0H0 1204 aaKnown RBP14.54□□□□□ -0.08
TGFBR3-201ENST00000212355 NOC2LQ9Y3T9 749 aaKnown RBP14.54□□□□□ -0.08
TGFBR3-201ENST00000212355 IQANK1A0A1B0GTG1 560 aa14.54□□□□□ -0.08
TGFBR3-201ENST00000212355 MMP10P09238 476 aa14.54□□□□□ -0.08
TGFBR3-201ENST00000212355 PDIA2Q13087 525 aaKnown RBP14.54□□□□□ -0.08
TGFBR3-201ENST00000212355 GRAPQ13588 217 aa14.54□□□□□ -0.08
TGFBR3-201ENST00000212355 GRAPLQ8TC17 118 aaPredicted RBP14.54□□□□□ -0.08
TGFBR3-201ENST00000212355 NMT1P30419 496 aaKnown RBP14.53□□□□□ -0.08
TGFBR3-201ENST00000212355 FMR1Q06787 632 aaKnown RBP eCLIP14.53□□□□□ -0.08
TGFBR3-201ENST00000212355 KRT33BQ14525 404 aa14.53□□□□□ -0.08
TGFBR3-201ENST00000212355 DCAF4L1Q3SXM0 396 aa14.53□□□□□ -0.08
TGFBR3-201ENST00000212355 CATSPER4Q7RTX7 472 aa14.53□□□□□ -0.08
TGFBR3-201ENST00000212355 LRRC1Q9BTT6 524 aa14.53□□□□□ -0.08
TGFBR3-201ENST00000212355 MYO5CQ9NQX4 1742 aa14.53□□□□□ -0.08
TGFBR3-201ENST00000212355 CLDN3O15551 220 aa14.53□□□□□ -0.08
TGFBR3-201ENST00000212355 TJP3O95049 919 aa14.53□□□□□ -0.08
TGFBR3-201ENST00000212355 PCP11498 1178 aaKnown RBP14.53□□□□□ -0.08
TGFBR3-201ENST00000212355 STMN1P16949 149 aa14.53□□□□□ -0.08
TGFBR3-201ENST00000212355 ANKRD40Q6AI12 368 aa14.53□□□□□ -0.08
TGFBR3-201ENST00000212355 FRA10AC1Q70Z53 315 aa14.53□□□□□ -0.08
TGFBR3-201ENST00000212355 AFG1LQ8WV93 481 aa14.53□□□□□ -0.08
TGFBR3-201ENST00000212355 CPA5Q8WXQ8 436 aa14.53□□□□□ -0.08
TGFBR3-201ENST00000212355 EXOC4Q96A65 974 aa14.53□□□□□ -0.08
TGFBR3-201ENST00000212355 SIK2Q9H0K1 926 aa14.53□□□□□ -0.08
TGFBR3-201ENST00000212355 GOLPH3Q9H4A6 298 aa14.53□□□□□ -0.08
TGFBR3-201ENST00000212355 CEP72Q9P209 647 aa14.53□□□□□ -0.08
TGFBR3-201ENST00000212355 GABBR1Q9UBS5 961 aa14.53□□□□□ -0.08
TGFBR3-201ENST00000212355 DBR1Q9UK59 544 aaKnown RBP14.53□□□□□ -0.08
TGFBR3-201ENST00000212355 ABT1Q9ULW3 272 aaKnown RBP14.53□□□□□ -0.08
TGFBR3-201ENST00000212355 GCFC2P16383 781 aaKnown RBP14.53□□□□□ -0.08
TGFBR3-201ENST00000212355 ANXA13P27216 316 aa14.53□□□□□ -0.08
TGFBR3-201ENST00000212355 LRRC63Q05C16 580 aa14.53□□□□□ -0.08
TGFBR3-201ENST00000212355 SNRNP48Q6IEG0 339 aaKnown RBP14.53□□□□□ -0.08
TGFBR3-201ENST00000212355 TRIM51Q9BSJ1 452 aa14.53□□□□□ -0.08
TGFBR3-201ENST00000212355 SENP2Q9HC62 589 aa14.53□□□□□ -0.08
TGFBR3-201ENST00000212355 BSDC1Q9NW68 430 aaPredicted RBP14.53□□□□□ -0.08
TGFBR3-201ENST00000212355 ZBTB24O43167 697 aaPredicted RBP14.53□□□□□ -0.08
TGFBR3-201ENST00000212355 ATMINO43313 823 aaPredicted RBP14.53□□□□□ -0.08
TGFBR3-201ENST00000212355 COPB2P35606 906 aa14.53□□□□□ -0.08
TGFBR3-201ENST00000212355 PRELPP51888 382 aa14.53□□□□□ -0.08
TGFBR3-201ENST00000212355 MCTP2Q6DN12 878 aa14.53□□□□□ -0.08
TGFBR3-201ENST00000212355 FAM161BQ96MY7 647 aa14.53□□□□□ -0.08
TGFBR3-201ENST00000212355 FSD1LQ9BXM9 530 aa14.53□□□□□ -0.08
TGFBR3-201ENST00000212355 CCDC90BQ9GZT6 254 aa14.53□□□□□ -0.08
TGFBR3-201ENST00000212355 ADA2Q9NZK5 511 aa14.53□□□□□ -0.08
TGFBR3-201ENST00000212355 SCHIP1Q9P0W5 487 aaPredicted RBP14.53□□□□□ -0.08
TGFBR3-201ENST00000212355 TYW5A2RUC4 315 aaKnown RBP14.53□□□□□ -0.08
TGFBR3-201ENST00000212355 CYP27B1O15528 508 aa14.53□□□□□ -0.08
TGFBR3-201ENST00000212355 SETSIPP0DME0 302 aa14.53□□□□□ -0.08
TGFBR3-201ENST00000212355 TRIML2Q8N7C3 387 aa14.53□□□□□ -0.08
TGFBR3-201ENST00000212355 UBE4BO95155 1302 aa14.53□□□□□ -0.08
TGFBR3-201ENST00000212355 ZNF335Q9H4Z2 1342 aaPredicted RBP14.53□□□□□ -0.08
TGFBR3-201ENST00000212355 CPDO75976 1380 aa14.53□□□□□ -0.08
TGFBR3-201ENST00000212355 HMGB1P1B2RPK0 211 aaPredicted RBP14.52□□□□□ -0.08
TGFBR3-201ENST00000212355 DFFAO00273 331 aa14.52□□□□□ -0.08
TGFBR3-201ENST00000212355 ADCY2Q08462 1091 aa14.52□□□□□ -0.08
TGFBR3-201ENST00000212355 PDIK1LQ8N165 341 aa14.52□□□□□ -0.08
TGFBR3-201ENST00000212355 NLGN1Q8N2Q7 840 aa14.52□□□□□ -0.08
TGFBR3-201ENST00000212355 ALDH18A1P54886 795 aaKnown RBP14.52□□□□□ -0.08
TGFBR3-201ENST00000212355 NLRP11P59045 1033 aaKnown RBP14.52□□□□□ -0.08
TGFBR3-201ENST00000212355 GPSM2P81274 684 aa14.52□□□□□ -0.08
TGFBR3-201ENST00000212355 CNOT10Q9H9A5 744 aaKnown RBP14.52□□□□□ -0.08
TGFBR3-201ENST00000212355 FAM217BQ9NTX9 383 aaPredicted RBP14.52□□□□□ -0.08
TGFBR3-201ENST00000212355 ZBTB5O15062 677 aa14.52□□□□□ -0.08
TGFBR3-201ENST00000212355 MYL1P05976 194 aa14.52□□□□□ -0.08
TGFBR3-201ENST00000212355 GNA15P30679 374 aa14.52□□□□□ -0.08
TGFBR3-201ENST00000212355 VAMP7P51809 220 aa14.52□□□□□ -0.08
TGFBR3-201ENST00000212355 PSMD2Q13200 908 aa14.52□□□□□ -0.08
TGFBR3-201ENST00000212355 SPIRE2Q8WWL2 714 aa14.52□□□□□ -0.08
TGFBR3-201ENST00000212355 CCDC124Q96CT7 223 aaKnown RBP14.52□□□□□ -0.08
TGFBR3-201ENST00000212355 EDEM3Q9BZQ6 932 aa14.52□□□□□ -0.08
TGFBR3-201ENST00000212355 CYP26A1O43174 497 aa14.52□□□□□ -0.09
TGFBR3-201ENST00000212355 ATP9BO43861 1147 aa14.52□□□□□ -0.09
TGFBR3-201ENST00000212355 ECE2O60344 883 aa14.52□□□□□ -0.09
TGFBR3-201ENST00000212355 USP14P54578 494 aa14.52□□□□□ -0.09
TGFBR3-201ENST00000212355 GPC5P78333 572 aa14.52□□□□□ -0.09
TGFBR3-201ENST00000212355 DTX3LQ8TDB6 740 aa14.52□□□□□ -0.09
TGFBR3-201ENST00000212355 SPATS2LQ9NUQ6 558 aaKnown RBP14.52□□□□□ -0.09
TGFBR3-201ENST00000212355 CFAP69A5D8W1 941 aa14.52□□□□□ -0.09
TGFBR3-201ENST00000212355 DAB2P98082 770 aa14.52□□□□□ -0.09
TGFBR3-201ENST00000212355 TMEM62Q0P6H9 643 aa14.52□□□□□ -0.09
TGFBR3-201ENST00000212355 HAUS8Q9BT25 410 aa14.52□□□□□ -0.09
TGFBR3-201ENST00000212355 ADD3Q9UEY8 706 aaKnown RBP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms