RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 M0QYV0 167 aa20.16■□□□□ 0.82
MBD3-201ENST00000156825 ZNF543Q08ER8 600 aa20.16■□□□□ 0.82
MBD3-201ENST00000156825 PDCLQ13371 301 aa20.16■□□□□ 0.82
MBD3-201ENST00000156825 TTLL4Q14679 1199 aa20.16■□□□□ 0.82
MBD3-201ENST00000156825 NUGGCQ68CJ6 796 aa20.16■□□□□ 0.82
MBD3-201ENST00000156825 CENPUQ71F23 418 aa20.16■□□□□ 0.82
MBD3-201ENST00000156825 CREB3O43889 395 aa20.16■□□□□ 0.82
MBD3-201ENST00000156825 HUS1O60921 280 aa20.16■□□□□ 0.82
MBD3-201ENST00000156825 RPSAP08865 295 aaKnown RBP20.16■□□□□ 0.82
MBD3-201ENST00000156825 HDLBPQ00341 1268 aaKnown RBP20.16■□□□□ 0.82
MBD3-201ENST00000156825 FMR1Q06787 632 aaKnown RBP eCLIP20.16■□□□□ 0.82
MBD3-201ENST00000156825 TEX2Q8IWB9 1127 aa20.16■□□□□ 0.82
MBD3-201ENST00000156825 ZNF564Q8TBZ8 553 aaPredicted RBP20.16■□□□□ 0.82
MBD3-201ENST00000156825 RFX7Q2KHR2 1363 aa20.16■□□□□ 0.82
MBD3-201ENST00000156825 NT5C2P49902 561 aa20.16■□□□□ 0.82
MBD3-201ENST00000156825 BAATQ14032 418 aaPredicted RBP20.16■□□□□ 0.82
MBD3-201ENST00000156825 CDC42EP5Q6NZY7 148 aa20.16■□□□□ 0.82
MBD3-201ENST00000156825 NUDCD1Q96RS6 583 aa20.16■□□□□ 0.82
MBD3-201ENST00000156825 TRIM9Q9C026 710 aa20.16■□□□□ 0.82
MBD3-201ENST00000156825 KLRK1P26718 216 aa20.15■□□□□ 0.82
MBD3-201ENST00000156825 CDC26Q8NHZ8 85 aa20.15■□□□□ 0.82
MBD3-201ENST00000156825 MMP19Q99542 508 aa20.15■□□□□ 0.82
MBD3-201ENST00000156825 RBAKQ9NYW8 714 aaPredicted RBP20.15■□□□□ 0.82
MBD3-201ENST00000156825 TJP3O95049 919 aa20.15■□□□□ 0.82
MBD3-201ENST00000156825 S100BP04271 92 aaPredicted RBP20.15■□□□□ 0.82
MBD3-201ENST00000156825 GNA15P30679 374 aa20.15■□□□□ 0.82
MBD3-201ENST00000156825 RFC1P35251 1148 aaPredicted RBP20.15■□□□□ 0.82
MBD3-201ENST00000156825 SF3B3Q15393 1217 aaKnown RBP20.15■□□□□ 0.82
MBD3-201ENST00000156825 RNF149Q8NC42 400 aa20.15■□□□□ 0.82
MBD3-201ENST00000156825 PDCD6IPQ8WUM4 868 aaKnown RBP20.15■□□□□ 0.82
MBD3-201ENST00000156825 MAML1Q92585 1016 aa20.15■□□□□ 0.82
MBD3-201ENST00000156825 ALKBH8Q96BT7 664 aaKnown RBP20.15■□□□□ 0.82
MBD3-201ENST00000156825 HERC5Q9UII4 1024 aaKnown RBP20.15■□□□□ 0.82
MBD3-201ENST00000156825 C1orf167Q5SNV9 1468 aa20.15■□□□□ 0.82
MBD3-201ENST00000156825 FAM47EQ6ZV65 393 aa20.15■□□□□ 0.82
MBD3-201ENST00000156825 PLA2G12BQ9BX93 195 aa20.15■□□□□ 0.82
MBD3-201ENST00000156825 CACYBPQ9HB71 228 aaKnown RBP20.15■□□□□ 0.82
MBD3-201ENST00000156825 KLHL8Q9P2G9 620 aaPredicted RBP20.15■□□□□ 0.82
MBD3-201ENST00000156825 CNOT7Q9UIV1 285 aaKnown RBP20.15■□□□□ 0.82
MBD3-201ENST00000156825 PCDHA10Q9Y5I2 948 aa20.15■□□□□ 0.82
MBD3-201ENST00000156825 CSF1RP07333 972 aa20.15■□□□□ 0.82
MBD3-201ENST00000156825 NCF2P19878 526 aaPredicted RBP20.15■□□□□ 0.82
MBD3-201ENST00000156825 ADORA2BP29275 332 aa20.15■□□□□ 0.82
MBD3-201ENST00000156825 PMLP29590 882 aa20.15■□□□□ 0.82
MBD3-201ENST00000156825 ARL13BQ3SXY8 428 aa20.15■□□□□ 0.82
MBD3-201ENST00000156825 TTC17Q96AE7 1141 aa20.15■□□□□ 0.82
MBD3-201ENST00000156825 PPWD1Q96BP3 646 aaKnown RBP20.15■□□□□ 0.82
MBD3-201ENST00000156825 BAG5Q9UL15 447 aa20.15■□□□□ 0.82
MBD3-201ENST00000156825 MED14O60244 1454 aa20.15■□□□□ 0.82
MBD3-201ENST00000156825 MAP3K21Q5TCX8 1036 aa20.14■□□□□ 0.82
MBD3-201ENST00000156825 KRT39Q6A163 491 aa20.14■□□□□ 0.82
MBD3-201ENST00000156825 PPP1R2P3Q6NXS1 205 aa20.14■□□□□ 0.82
MBD3-201ENST00000156825 CHP1Q99653 195 aa20.14■□□□□ 0.82
MBD3-201ENST00000156825 INTUQ9ULD6 942 aa20.14■□□□□ 0.82
MBD3-201ENST00000156825 PPME1Q9Y570 386 aa20.14■□□□□ 0.82
MBD3-201ENST00000156825 ATP8B1O43520 1251 aa20.14■□□□□ 0.81
MBD3-201ENST00000156825 SFNP31947 248 aa20.14■□□□□ 0.81
MBD3-201ENST00000156825 USP11P51784 963 aa20.14■□□□□ 0.81
MBD3-201ENST00000156825 PSMC1P62191 440 aaKnown RBP20.14■□□□□ 0.81
MBD3-201ENST00000156825 CEP120Q8N960 986 aa20.14■□□□□ 0.81
MBD3-201ENST00000156825 CFLARO15519 480 aa20.14■□□□□ 0.81
MBD3-201ENST00000156825 PDCD7Q8N8D1 485 aaKnown RBP20.14■□□□□ 0.81
MBD3-201ENST00000156825 GBP7Q8N8V2 638 aaPredicted RBP20.14■□□□□ 0.81
MBD3-201ENST00000156825 TMEM143Q96AN5 459 aa20.14■□□□□ 0.81
MBD3-201ENST00000156825 SUDS3Q9H7L9 328 aaPredicted RBP20.14■□□□□ 0.81
MBD3-201ENST00000156825 NAALADL2Q58DX5 795 aa20.13■□□□□ 0.81
MBD3-201ENST00000156825 RAB44Q7Z6P3 723 aaPredicted RBP20.13■□□□□ 0.81
MBD3-201ENST00000156825 APOBEC3FQ8IUX4 373 aaKnown RBP20.13■□□□□ 0.81
MBD3-201ENST00000156825 OSBPL9Q96SU4 736 aa20.13■□□□□ 0.81
MBD3-201ENST00000156825 ZBED2Q9BTP6 218 aa20.13■□□□□ 0.81
MBD3-201ENST00000156825 RRP15Q9Y3B9 282 aaKnown RBP20.13■□□□□ 0.81
MBD3-201ENST00000156825 UBE2Q2LH0YL09 131 aa20.13■□□□□ 0.81
MBD3-201ENST00000156825 RMDN2Q96LZ7 410 aa20.13■□□□□ 0.81
MBD3-201ENST00000156825 ACOT2P49753 483 aa20.13■□□□□ 0.81
MBD3-201ENST00000156825 SPDL1Q96EA4 605 aa20.13■□□□□ 0.81
MBD3-201ENST00000156825 PHF20Q9BVI0 1012 aa20.13■□□□□ 0.81
MBD3-201ENST00000156825 KIAA1586Q9HCI6 787 aa20.13■□□□□ 0.81
MBD3-201ENST00000156825 ZCCHC17Q9NP64 241 aaKnown RBP20.13■□□□□ 0.81
MBD3-201ENST00000156825 AGO2Q9UKV8 859 aaKnown RBP20.13■□□□□ 0.81
MBD3-201ENST00000156825 YWHABP31946 246 aaKnown RBP20.13■□□□□ 0.81
MBD3-201ENST00000156825 MAP7Q14244 749 aa20.13■□□□□ 0.81
MBD3-201ENST00000156825 ELAC2Q9BQ52 826 aaKnown RBP20.13■□□□□ 0.81
MBD3-201ENST00000156825 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.13■□□□□ 0.81
MBD3-201ENST00000156825 SLC9A2Q9UBY0 812 aa20.13■□□□□ 0.81
MBD3-201ENST00000156825 PLEKHG2Q9H7P9 1386 aa20.13■□□□□ 0.81
MBD3-201ENST00000156825 CCDC188H7C350 402 aa20.13■□□□□ 0.81
MBD3-201ENST00000156825 NTSR2O95665 410 aa20.13■□□□□ 0.81
MBD3-201ENST00000156825 MOCS2O96007 188 aaPredicted RBP20.13■□□□□ 0.81
MBD3-201ENST00000156825 STX1BP61266 288 aa20.13■□□□□ 0.81
MBD3-201ENST00000156825 STK4Q13043 487 aa20.13■□□□□ 0.81
MBD3-201ENST00000156825 ZNRF3Q9ULT6 936 aa20.13■□□□□ 0.81
MBD3-201ENST00000156825 CYP26A1O43174 497 aa20.12■□□□□ 0.81
MBD3-201ENST00000156825 MKRN4PQ13434 485 aaPredicted RBP20.12■□□□□ 0.81
MBD3-201ENST00000156825 R3HDM1Q15032 1099 aaKnown RBP20.12■□□□□ 0.81
MBD3-201ENST00000156825 GBP5Q96PP8 586 aa20.12■□□□□ 0.81
MBD3-201ENST00000156825 WDR24Q96S15 920 aa20.12■□□□□ 0.81
MBD3-201ENST00000156825 SRRM1Q8IYB3 904 aaKnown RBP20.12■□□□□ 0.81
MBD3-201ENST00000156825 GIMAP8Q8ND71 665 aaPredicted RBP20.12■□□□□ 0.81
MBD3-201ENST00000156825 PDZD8Q8NEN9 1154 aa20.12■□□□□ 0.81
MBD3-201ENST00000156825 BPIFA3Q9BQP9 254 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms