RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 STK3Q13188 491 aa17.83■□□□□ 0.44
ERCC1-201ENST00000013807 MTERF2Q49AM1 385 aa17.83■□□□□ 0.44
ERCC1-201ENST00000013807 CLLU1OSQ5K130 101 aa17.83■□□□□ 0.44
ERCC1-201ENST00000013807 NEK8Q86SG6 692 aa17.83■□□□□ 0.44
ERCC1-201ENST00000013807 RBM23Q86U06 439 aaKnown RBP17.83■□□□□ 0.44
ERCC1-201ENST00000013807 EXOC8Q8IYI6 725 aa17.83■□□□□ 0.44
ERCC1-201ENST00000013807 MICAL1Q8TDZ2 1067 aa17.83■□□□□ 0.44
ERCC1-201ENST00000013807 NLRP7Q8WX94 980 aa17.83■□□□□ 0.44
ERCC1-201ENST00000013807 SUSD6Q92537 303 aa17.83■□□□□ 0.44
ERCC1-201ENST00000013807 JPH2Q9BR39 696 aaPredicted RBP17.83■□□□□ 0.44
ERCC1-201ENST00000013807 SEPT9Q9UHD8 586 aaPredicted RBP17.83■□□□□ 0.44
ERCC1-201ENST00000013807 TPCN1Q9ULQ1 816 aa17.83■□□□□ 0.44
ERCC1-201ENST00000013807 KCNJ14Q9UNX9 436 aa17.83■□□□□ 0.44
ERCC1-201ENST00000013807 CARNS1A5YM72 827 aa17.82■□□□□ 0.44
ERCC1-201ENST00000013807 EML1O00423 815 aa17.82■□□□□ 0.44
ERCC1-201ENST00000013807 DKC1O60832 514 aaKnown RBP eCLIP17.82■□□□□ 0.44
ERCC1-201ENST00000013807 ZNF623O75123 536 aa17.82■□□□□ 0.44
ERCC1-201ENST00000013807 XBP1P17861 261 aa17.82■□□□□ 0.44
ERCC1-201ENST00000013807 QARSP47897 775 aaKnown RBP17.82■□□□□ 0.44
ERCC1-201ENST00000013807 RNF135Q8IUD6 432 aa17.82■□□□□ 0.44
ERCC1-201ENST00000013807 ABI1Q8IZP0 508 aa17.82■□□□□ 0.44
ERCC1-201ENST00000013807 VN1R2Q8NFZ6 395 aa17.82■□□□□ 0.44
ERCC1-201ENST00000013807 HAS1Q92839 578 aa17.82■□□□□ 0.44
ERCC1-201ENST00000013807 ZNF558Q96NG5 402 aa17.82■□□□□ 0.44
ERCC1-201ENST00000013807 NAP1L4Q99733 375 aaKnown RBP17.82■□□□□ 0.44
ERCC1-201ENST00000013807 MRPL9Q9BYD2 267 aaKnown RBP17.82■□□□□ 0.44
ERCC1-201ENST00000013807 SLKQ9H2G2 1235 aaPredicted RBP17.82■□□□□ 0.44
ERCC1-201ENST00000013807 SPG21Q9NZD8 308 aa17.82■□□□□ 0.44
ERCC1-201ENST00000013807 WDFY4Q6ZS81 3184 aa17.81■□□□□ 0.44
ERCC1-201ENST00000013807 A0A087WZ62 844 aa17.81■□□□□ 0.44
ERCC1-201ENST00000013807 CCDC194A0A1B0GVG4 234 aa17.81■□□□□ 0.44
ERCC1-201ENST00000013807 TMEM150BA6NC51 233 aa17.81■□□□□ 0.44
ERCC1-201ENST00000013807 DDX11L8A8MPP1 907 aa17.81■□□□□ 0.44
ERCC1-201ENST00000013807 CSPG5O95196 566 aa17.81■□□□□ 0.44
ERCC1-201ENST00000013807 CTDNEP1O95476 244 aa17.81■□□□□ 0.44
ERCC1-201ENST00000013807 P4HBP07237 508 aaKnown RBP17.81■□□□□ 0.44
ERCC1-201ENST00000013807 SKIP12755 728 aa17.81■□□□□ 0.44
ERCC1-201ENST00000013807 IBSPP21815 317 aaPredicted RBP17.81■□□□□ 0.44
ERCC1-201ENST00000013807 SFPQP23246 707 aaKnown RBP eCLIP17.81■□□□□ 0.44
ERCC1-201ENST00000013807 HOXD11P31277 338 aaPredicted RBP17.81■□□□□ 0.44
ERCC1-201ENST00000013807 PHKA2P46019 1235 aa17.81■□□□□ 0.44
ERCC1-201ENST00000013807 KRT17Q04695 432 aa17.81■□□□□ 0.44
ERCC1-201ENST00000013807 ANKRD1Q15327 319 aa17.81■□□□□ 0.44
ERCC1-201ENST00000013807 LETM2Q2VYF4 491 aa17.81■□□□□ 0.44
ERCC1-201ENST00000013807 SLC39A11Q8N1S5 342 aa17.81■□□□□ 0.44
ERCC1-201ENST00000013807 ZNF668Q96K58 619 aaPredicted RBP17.81■□□□□ 0.44
ERCC1-201ENST00000013807 FDXACB1Q9BRP7 624 aaPredicted RBP17.81■□□□□ 0.44
ERCC1-201ENST00000013807 S1PR5Q9H228 398 aa17.81■□□□□ 0.44
ERCC1-201ENST00000013807 KCNH6Q9H252 994 aa17.81■□□□□ 0.44
ERCC1-201ENST00000013807 DHX33Q9H6R0 707 aaKnown RBP17.81■□□□□ 0.44
ERCC1-201ENST00000013807 IFT122Q9HBG6 1241 aa17.81■□□□□ 0.44
ERCC1-201ENST00000013807 CYP26B1Q9NR63 512 aa17.81■□□□□ 0.44
ERCC1-201ENST00000013807 SUCLA2Q9P2R7 463 aaPredicted RBP17.81■□□□□ 0.44
ERCC1-201ENST00000013807 BARX2Q9UMQ3 279 aaPredicted RBP17.81■□□□□ 0.44
ERCC1-201ENST00000013807 PER2O15055 1255 aa17.8■□□□□ 0.44
ERCC1-201ENST00000013807 FGFR4P22455 802 aa17.8■□□□□ 0.44
ERCC1-201ENST00000013807 C4orf19Q8IY42 314 aa17.8■□□□□ 0.44
ERCC1-201ENST00000013807 SCLT1Q96NL6 688 aa17.8■□□□□ 0.44
ERCC1-201ENST00000013807 TCF25Q9BQ70 676 aa17.8■□□□□ 0.44
ERCC1-201ENST00000013807 SH2D3AQ9BRG2 576 aa17.8■□□□□ 0.44
ERCC1-201ENST00000013807 PHF7Q9BWX1 381 aaPredicted RBP17.8■□□□□ 0.44
ERCC1-201ENST00000013807 USP15Q9Y4E8 981 aaPredicted RBP17.8■□□□□ 0.44
ERCC1-201ENST00000013807 ZDBF2Q9HCK1 2354 aa17.8■□□□□ 0.44
ERCC1-201ENST00000013807 CSDE1O75534 798 aaKnown RBP17.79■□□□□ 0.44
ERCC1-201ENST00000013807 HOXB8P17481 243 aaPredicted RBP17.79■□□□□ 0.44
ERCC1-201ENST00000013807 SPIRE1Q08AE8 756 aa17.79■□□□□ 0.44
ERCC1-201ENST00000013807 EPHA7Q15375 998 aa17.79■□□□□ 0.44
ERCC1-201ENST00000013807 BMP8AQ7Z5Y6 402 aa17.79■□□□□ 0.44
ERCC1-201ENST00000013807 RHPN2Q8IUC4 686 aa17.79■□□□□ 0.44
ERCC1-201ENST00000013807 MRPL43Q8N983 215 aaKnown RBP17.79■□□□□ 0.44
ERCC1-201ENST00000013807 HELQQ8TDG4 1101 aa17.79■□□□□ 0.44
ERCC1-201ENST00000013807 OXER1Q8TDS5 423 aa17.79■□□□□ 0.44
ERCC1-201ENST00000013807 EDAQ92838 391 aa17.79■□□□□ 0.44
ERCC1-201ENST00000013807 TNFRSF25Q93038 417 aa17.79■□□□□ 0.44
ERCC1-201ENST00000013807 WRAP73Q9P2S5 460 aaPredicted RBP17.79■□□□□ 0.44
ERCC1-201ENST00000013807 IRAK3Q9Y616 596 aa17.79■□□□□ 0.44
ERCC1-201ENST00000013807 HIDE1A8MVS5 230 aa17.78■□□□□ 0.44
ERCC1-201ENST00000013807 GAS2O43903 313 aaKnown RBP17.78■□□□□ 0.44
ERCC1-201ENST00000013807 SRGAP2BP0DMP2 458 aa17.78■□□□□ 0.44
ERCC1-201ENST00000013807 FDPSP14324 419 aaKnown RBP17.78■□□□□ 0.44
ERCC1-201ENST00000013807 RFC5P40937 340 aa17.78■□□□□ 0.44
ERCC1-201ENST00000013807 ALDH7A1P49419 539 aaKnown RBP17.78■□□□□ 0.44
ERCC1-201ENST00000013807 RAB27AP51159 221 aa17.78■□□□□ 0.44
ERCC1-201ENST00000013807 RBM10P98175 930 aaKnown RBP17.78■□□□□ 0.44
ERCC1-201ENST00000013807 ERICH6BQ5W0A0 696 aa17.78■□□□□ 0.44
ERCC1-201ENST00000013807 ANKRD54Q6NXT1 300 aa17.78■□□□□ 0.44
ERCC1-201ENST00000013807 SYCE2Q6PIF2 218 aa17.78■□□□□ 0.44
ERCC1-201ENST00000013807 SLFN12Q8IYM2 578 aa17.78■□□□□ 0.44
ERCC1-201ENST00000013807 SLC7A3Q8WY07 619 aa17.78■□□□□ 0.44
ERCC1-201ENST00000013807 WASF1Q92558 559 aa17.78■□□□□ 0.44
ERCC1-201ENST00000013807 GJB4Q9NTQ9 266 aa17.78■□□□□ 0.44
ERCC1-201ENST00000013807 FAM105AQ9NUU6 356 aa17.78■□□□□ 0.44
ERCC1-201ENST00000013807 MUTYHQ9UIF7 546 aa17.78■□□□□ 0.44
ERCC1-201ENST00000013807 C2orf71A6NGG8 1288 aa17.77■□□□□ 0.44
ERCC1-201ENST00000013807 ASAP2O43150 1006 aa17.77■□□□□ 0.44
ERCC1-201ENST00000013807 CCNT1O60563 726 aaKnown RBP17.77■□□□□ 0.44
ERCC1-201ENST00000013807 AK2P54819 239 aa17.77■□□□□ 0.44
ERCC1-201ENST00000013807 NPEPPSP55786 919 aa17.77■□□□□ 0.44
ERCC1-201ENST00000013807 BCAR1P56945 870 aa17.77■□□□□ 0.44
ERCC1-201ENST00000013807 SMC1AQ14683 1233 aaKnown RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms