RNA–Protein interactions for RNA: ENST00000013034.3

NME1-201, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 3 BASIC

Gene NME1, Length 796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-201ENST00000013034 PCDHA10Q9Y5I2 948 aa12.62□□□□□ -0.39
NME1-201ENST00000013034 IRAK3Q9Y616 596 aa12.62□□□□□ -0.39
NME1-201ENST00000013034 ESYT2A0FGR8 921 aa12.61□□□□□ -0.39
NME1-201ENST00000013034 WDR64B1ANS9 1081 aa12.61□□□□□ -0.39
NME1-201ENST00000013034 ZBTB43O43298 467 aa12.61□□□□□ -0.39
NME1-201ENST00000013034 OATP04181 439 aa12.61□□□□□ -0.39
NME1-201ENST00000013034 ASGR2P07307 311 aa12.61□□□□□ -0.39
NME1-201ENST00000013034 DARSP14868 501 aaKnown RBP12.61□□□□□ -0.39
NME1-201ENST00000013034 DDIT3P35638 169 aa12.61□□□□□ -0.39
NME1-201ENST00000013034 METAP2P50579 478 aaKnown RBP eCLIP12.61□□□□□ -0.39
NME1-201ENST00000013034 RCAN1P53805 252 aa12.61□□□□□ -0.39
NME1-201ENST00000013034 POLGP54098 1239 aaPredicted RBP12.61□□□□□ -0.39
NME1-201ENST00000013034 BCAR1P56945 870 aa12.61□□□□□ -0.39
NME1-201ENST00000013034 NUCB2P80303 420 aa12.61□□□□□ -0.39
NME1-201ENST00000013034 EFCAB12Q6NXP0 572 aa12.61□□□□□ -0.39
NME1-201ENST00000013034 ERMP1Q7Z2K6 904 aa12.61□□□□□ -0.39
NME1-201ENST00000013034 LRRC71Q8N4P6 559 aa12.61□□□□□ -0.39
NME1-201ENST00000013034 TMEM87AQ8NBN3 555 aa12.61□□□□□ -0.39
NME1-201ENST00000013034 NKD2Q969F2 451 aaPredicted RBP12.61□□□□□ -0.39
NME1-201ENST00000013034 GBP4Q96PP9 640 aa12.61□□□□□ -0.39
NME1-201ENST00000013034 SLKQ9H2G2 1235 aaPredicted RBP12.61□□□□□ -0.39
NME1-201ENST00000013034 SMOC2Q9H3U7 446 aa12.61□□□□□ -0.39
NME1-201ENST00000013034 GABBR1Q9UBS5 961 aa12.61□□□□□ -0.39
NME1-201ENST00000013034 V9GY48 417 aaPredicted RBP12.61□□□□□ -0.39
NME1-201ENST00000013034 GOLGA8AA7E2F4 631 aa12.6□□□□□ -0.39
NME1-201ENST00000013034 DDX11L8A8MPP1 907 aa12.6□□□□□ -0.39
NME1-201ENST00000013034 GOLGA8BA8MQT2 603 aa12.6□□□□□ -0.39
NME1-201ENST00000013034 ZC3H11AO75152 810 aaKnown RBP eCLIP12.6□□□□□ -0.39
NME1-201ENST00000013034 CTSAP10619 480 aa12.6□□□□□ -0.39
NME1-201ENST00000013034 PRKCEQ02156 737 aa12.6□□□□□ -0.39
NME1-201ENST00000013034 NECTIN1Q15223 517 aa12.6□□□□□ -0.39
NME1-201ENST00000013034 ATAT1Q5SQI0 421 aa12.6□□□□□ -0.39
NME1-201ENST00000013034 RNF20Q5VTR2 975 aa12.6□□□□□ -0.39
NME1-201ENST00000013034 JAKMIP3Q5VZ66 844 aa12.6□□□□□ -0.39
NME1-201ENST00000013034 CWF19L1Q69YN2 538 aaKnown RBP12.6□□□□□ -0.39
NME1-201ENST00000013034 CCDC149Q6ZUS6 474 aa12.6□□□□□ -0.39
NME1-201ENST00000013034 TRMT1LQ7Z2T5 733 aaKnown RBP12.6□□□□□ -0.39
NME1-201ENST00000013034 FRMD5Q7Z6J6 570 aa12.6□□□□□ -0.39
NME1-201ENST00000013034 VPS52Q8N1B4 723 aa12.6□□□□□ -0.39
NME1-201ENST00000013034 REXO1Q8N1G1 1221 aaKnown RBP12.6□□□□□ -0.39
NME1-201ENST00000013034 CCDC12Q8WUD4 166 aaPredicted RBP12.6□□□□□ -0.39
NME1-201ENST00000013034 NLRP7Q8WX94 980 aa12.6□□□□□ -0.39
NME1-201ENST00000013034 ACSF2Q96CM8 615 aaPredicted RBP12.6□□□□□ -0.39
NME1-201ENST00000013034 INTS4Q96HW7 963 aaKnown RBP12.6□□□□□ -0.39
NME1-201ENST00000013034 TM6SF1Q9BZW5 370 aa12.6□□□□□ -0.39
NME1-201ENST00000013034 SFXN1Q9H9B4 322 aa12.6□□□□□ -0.39
NME1-201ENST00000013034 CYP26B1Q9NR63 512 aa12.6□□□□□ -0.39
NME1-201ENST00000013034 SAMM50Q9Y512 469 aa12.6□□□□□ -0.39
NME1-201ENST00000013034 DENND4AQ7Z401 1863 aa12.59□□□□□ -0.39
NME1-201ENST00000013034 NT5C1B-RDH14C9J2C7 533 aa12.59□□□□□ -0.39
NME1-201ENST00000013034 CXCL14O95715 111 aa12.59□□□□□ -0.39
NME1-201ENST00000013034 WEE2P0C1S8 567 aa12.59□□□□□ -0.39
NME1-201ENST00000013034 PDIA4P13667 645 aaKnown RBP12.59□□□□□ -0.39
NME1-201ENST00000013034 AOC1P19801 751 aa12.59□□□□□ -0.39
NME1-201ENST00000013034 PFKFB3Q16875 520 aaPredicted RBP12.59□□□□□ -0.39
NME1-201ENST00000013034 DDX53Q86TM3 631 aaKnown RBP12.59□□□□□ -0.39
NME1-201ENST00000013034 CABP7Q86V35 215 aa12.59□□□□□ -0.39
NME1-201ENST00000013034 PPFIBP1Q86W92 1011 aa12.59□□□□□ -0.39
NME1-201ENST00000013034 KCNB2Q92953 911 aa12.59□□□□□ -0.39
NME1-201ENST00000013034 TRAIPQ9BWF2 469 aa12.59□□□□□ -0.39
NME1-201ENST00000013034 ZMYND12Q9H0C1 365 aa12.59□□□□□ -0.39
NME1-201ENST00000013034 CHST12Q9NRB3 414 aa12.59□□□□□ -0.39
NME1-201ENST00000013034 NRBP2Q9NSY0 501 aa12.59□□□□□ -0.39
NME1-201ENST00000013034 STK39Q9UEW8 545 aa12.59□□□□□ -0.39
NME1-201ENST00000013034 LIMD1Q9UGP4 676 aa12.59□□□□□ -0.39
NME1-201ENST00000013034 DMDP11532 3685 aa12.59□□□□□ -0.39
NME1-201ENST00000013034 ZNF862O60290 1169 aa12.58□□□□□ -0.4
NME1-201ENST00000013034 SKIP12755 728 aa12.58□□□□□ -0.4
NME1-201ENST00000013034 EPCAMP16422 314 aa12.58□□□□□ -0.4
NME1-201ENST00000013034 FGFR4P22455 802 aa12.58□□□□□ -0.4
NME1-201ENST00000013034 SFPQP23246 707 aaKnown RBP eCLIP12.58□□□□□ -0.4
NME1-201ENST00000013034 CIITAP33076 1130 aa12.58□□□□□ -0.4
NME1-201ENST00000013034 PHKA2P46019 1235 aa12.58□□□□□ -0.4
NME1-201ENST00000013034 CDC42EP1Q00587 391 aa12.58□□□□□ -0.4
NME1-201ENST00000013034 TBC1D8BQ0IIM8 1120 aa12.58□□□□□ -0.4
NME1-201ENST00000013034 PRR16Q569H4 304 aa12.58□□□□□ -0.4
NME1-201ENST00000013034 GLB1LQ6UWU2 654 aa12.58□□□□□ -0.4
NME1-201ENST00000013034 OTOP3Q7RTS5 596 aa12.58□□□□□ -0.4
NME1-201ENST00000013034 TMEM173Q86WV6 379 aaPredicted RBP12.58□□□□□ -0.4
NME1-201ENST00000013034 CCDC105Q8IYK2 499 aa12.58□□□□□ -0.4
NME1-201ENST00000013034 C12orf76Q8N812 135 aaPredicted RBP12.58□□□□□ -0.4
NME1-201ENST00000013034 FLCNQ8NFG4 579 aa12.58□□□□□ -0.4
NME1-201ENST00000013034 SLC22A17Q8WUG5 538 aa12.58□□□□□ -0.4
NME1-201ENST00000013034 IGSF21Q96ID5 467 aa12.58□□□□□ -0.4
NME1-201ENST00000013034 ZNF668Q96K58 619 aaPredicted RBP12.58□□□□□ -0.4
NME1-201ENST00000013034 GCOM2Q9BZD3 368 aaPredicted RBP12.58□□□□□ -0.4
NME1-201ENST00000013034 C6orf50Q9HD87 102 aa12.58□□□□□ -0.4
NME1-201ENST00000013034 DISC1Q9NRI5 854 aa12.58□□□□□ -0.4
NME1-201ENST00000013034 BRPF3Q9ULD4 1205 aa12.58□□□□□ -0.4
NME1-201ENST00000013034 DUSP12Q9UNI6 340 aa12.58□□□□□ -0.4
NME1-201ENST00000013034 KLF18A0A0U1RQI7 1052 aa12.57□□□□□ -0.4
NME1-201ENST00000013034 SPDYE4A6NLX3 237 aa12.57□□□□□ -0.4
NME1-201ENST00000013034 PSMA5P28066 241 aa12.57□□□□□ -0.4
NME1-201ENST00000013034 CDC27P30260 824 aa12.57□□□□□ -0.4
NME1-201ENST00000013034 SFNP31947 248 aa12.57□□□□□ -0.4
NME1-201ENST00000013034 ID4P47928 161 aa12.57□□□□□ -0.4
NME1-201ENST00000013034 RAB27AP51159 221 aa12.57□□□□□ -0.4
NME1-201ENST00000013034 NEK4P51957 841 aa12.57□□□□□ -0.4
NME1-201ENST00000013034 JAK3P52333 1124 aa12.57□□□□□ -0.4
NME1-201ENST00000013034 TDGQ13569 410 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms