RNA–Protein interactions for RNA: ENST00000002596.5

HS3ST1-201, Transcript of heparan sulfate-glucosamine 3-sulfotransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HS3ST1, Length 8,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST1-201ENST00000002596 PHLPP2Q6ZVD8 1323 aa13.16□□□□□ -0.3
HS3ST1-201ENST00000002596 IPO5O00410 1097 aaKnown RBP13.16□□□□□ -0.3
HS3ST1-201ENST00000002596 NFIBO00712 420 aa13.16□□□□□ -0.3
HS3ST1-201ENST00000002596 GTPBP6O43824 516 aaPredicted RBP13.16□□□□□ -0.3
HS3ST1-201ENST00000002596 SCARA5Q6ZMJ2 495 aa13.16□□□□□ -0.3
HS3ST1-201ENST00000002596 SLC35F6Q8N357 371 aa13.16□□□□□ -0.3
HS3ST1-201ENST00000002596 XDHP47989 1333 aa13.16□□□□□ -0.3
HS3ST1-201ENST00000002596 A0A0G2JND7 137 aa13.16□□□□□ -0.3
HS3ST1-201ENST00000002596 H0Y626 953 aa13.16□□□□□ -0.3
HS3ST1-201ENST00000002596 TRIM16O95361 564 aa13.16□□□□□ -0.3
HS3ST1-201ENST00000002596 PSAPP07602 524 aa13.16□□□□□ -0.3
HS3ST1-201ENST00000002596 APBA1Q02410 837 aa13.16□□□□□ -0.3
HS3ST1-201ENST00000002596 POTEEQ6S8J3 1075 aa13.16□□□□□ -0.3
HS3ST1-201ENST00000002596 DDIASQ8IXT1 998 aa13.16□□□□□ -0.3
HS3ST1-201ENST00000002596 OTUD7AQ8TE49 926 aaPredicted RBP13.16□□□□□ -0.3
HS3ST1-201ENST00000002596 PPP2R3CQ969Q6 453 aa13.16□□□□□ -0.3
HS3ST1-201ENST00000002596 CLIC6Q96NY7 704 aa13.16□□□□□ -0.3
HS3ST1-201ENST00000002596 TUBGCP2Q9BSJ2 902 aa13.16□□□□□ -0.3
HS3ST1-201ENST00000002596 TSPAN9O75954 239 aa13.16□□□□□ -0.3
HS3ST1-201ENST00000002596 FYNP06241 537 aa13.16□□□□□ -0.3
HS3ST1-201ENST00000002596 SPDYAQ5MJ70 313 aa13.16□□□□□ -0.3
HS3ST1-201ENST00000002596 LRRC8EQ6NSJ5 796 aa13.16□□□□□ -0.3
HS3ST1-201ENST00000002596 STX12Q86Y82 276 aa13.16□□□□□ -0.3
HS3ST1-201ENST00000002596 NLGN1Q8N2Q7 840 aa13.16□□□□□ -0.3
HS3ST1-201ENST00000002596 SDR42E1Q8WUS8 393 aa13.16□□□□□ -0.3
HS3ST1-201ENST00000002596 PPP1R13BQ96KQ4 1090 aa13.16□□□□□ -0.3
HS3ST1-201ENST00000002596 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.16□□□□□ -0.3
HS3ST1-201ENST00000002596 GOLGA8HP0CJ92 632 aa13.16□□□□□ -0.3
HS3ST1-201ENST00000002596 YAF2Q8IY57 180 aa13.16□□□□□ -0.3
HS3ST1-201ENST00000002596 SLC10A4Q96EP9 437 aa13.16□□□□□ -0.3
HS3ST1-201ENST00000002596 SIKE1Q9BRV8 207 aa13.16□□□□□ -0.3
HS3ST1-201ENST00000002596 ZBTB40Q9NUA8 1239 aa13.16□□□□□ -0.3
HS3ST1-201ENST00000002596 VAMP4O75379 141 aa13.16□□□□□ -0.3
HS3ST1-201ENST00000002596 ASMTLO95671 621 aa13.16□□□□□ -0.3
HS3ST1-201ENST00000002596 ECEL1O95672 775 aa13.16□□□□□ -0.3
HS3ST1-201ENST00000002596 CUL1Q13616 776 aa13.16□□□□□ -0.3
HS3ST1-201ENST00000002596 NLRP14Q86W24 1093 aa13.16□□□□□ -0.3
HS3ST1-201ENST00000002596 APLFQ8IW19 511 aaPredicted RBP13.16□□□□□ -0.3
HS3ST1-201ENST00000002596 GOLGA4Q13439 2230 aaKnown RBP13.16□□□□□ -0.3
HS3ST1-201ENST00000002596 DENND3A2RUS2 1198 aa13.16□□□□□ -0.3
HS3ST1-201ENST00000002596 S100A5P33763 92 aa13.16□□□□□ -0.3
HS3ST1-201ENST00000002596 NDUFA8P51970 172 aa13.16□□□□□ -0.3
HS3ST1-201ENST00000002596 MORF4L2Q15014 288 aa13.16□□□□□ -0.3
HS3ST1-201ENST00000002596 CYTH1Q15438 398 aa13.16□□□□□ -0.3
HS3ST1-201ENST00000002596 MPP4Q96JB8 637 aa13.16□□□□□ -0.3
HS3ST1-201ENST00000002596 POLR3AO14802 1390 aaPredicted RBP13.15□□□□□ -0.3
HS3ST1-201ENST00000002596 ABCC10Q5T3U5 1492 aa13.15□□□□□ -0.3
HS3ST1-201ENST00000002596 ZBTB38Q8NAP3 1195 aaPredicted RBP13.15□□□□□ -0.3
HS3ST1-201ENST00000002596 DIS3LQ8TF46 1054 aaKnown RBP13.15□□□□□ -0.3
HS3ST1-201ENST00000002596 SYMPKQ92797 1274 aaKnown RBP13.15□□□□□ -0.3
HS3ST1-201ENST00000002596 SPATA2Q9UM82 520 aa13.15□□□□□ -0.3
HS3ST1-201ENST00000002596 AFG1LQ8WV93 481 aa13.15□□□□□ -0.3
HS3ST1-201ENST00000002596 COA7Q96BR5 231 aa13.15□□□□□ -0.3
HS3ST1-201ENST00000002596 CEP170P1Q96L14 293 aa13.15□□□□□ -0.3
HS3ST1-201ENST00000002596 HEXIM2Q96MH2 286 aaKnown RBP13.15□□□□□ -0.3
HS3ST1-201ENST00000002596 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.15□□□□□ -0.3
HS3ST1-201ENST00000002596 NXF1Q9UBU9 619 aaKnown RBP13.15□□□□□ -0.3
HS3ST1-201ENST00000002596 ALDH6A1Q02252 535 aaKnown RBP13.15□□□□□ -0.3
HS3ST1-201ENST00000002596 ME3Q16798 604 aa13.15□□□□□ -0.3
HS3ST1-201ENST00000002596 ZNF274Q96GC6 653 aaPredicted RBP13.15□□□□□ -0.3
HS3ST1-201ENST00000002596 ZWILCHQ9H900 591 aa13.15□□□□□ -0.3
HS3ST1-201ENST00000002596 MRPL39Q9NYK5 338 aaKnown RBP13.15□□□□□ -0.3
HS3ST1-201ENST00000002596 SKAP2O75563 359 aaPredicted RBP13.15□□□□□ -0.3
HS3ST1-201ENST00000002596 ALCAMQ13740 583 aa13.15□□□□□ -0.3
HS3ST1-201ENST00000002596 EFTUD2Q15029 972 aaKnown RBP eCLIP13.15□□□□□ -0.3
HS3ST1-201ENST00000002596 TTC17Q96AE7 1141 aa13.15□□□□□ -0.3
HS3ST1-201ENST00000002596 CYP4F11Q9HBI6 524 aa13.15□□□□□ -0.3
HS3ST1-201ENST00000002596 N6AMT1Q9Y5N5 214 aa13.15□□□□□ -0.3
HS3ST1-201ENST00000002596 TRAPPC8Q9Y2L5 1435 aa13.15□□□□□ -0.3
HS3ST1-201ENST00000002596 UBA6A0AVT1 1052 aaPredicted RBP13.15□□□□□ -0.3
HS3ST1-201ENST00000002596 KRT6AP02538 564 aa13.15□□□□□ -0.3
HS3ST1-201ENST00000002596 KRT6BP04259 564 aa13.15□□□□□ -0.3
HS3ST1-201ENST00000002596 KRT6CP48668 564 aa13.15□□□□□ -0.3
HS3ST1-201ENST00000002596 RPS6P62753 249 aaKnown RBP13.15□□□□□ -0.3
HS3ST1-201ENST00000002596 PTGDRQ13258 359 aa13.15□□□□□ -0.3
HS3ST1-201ENST00000002596 CCSAPQ6IQ19 270 aaPredicted RBP13.15□□□□□ -0.3
HS3ST1-201ENST00000002596 LRRC31Q6UY01 552 aa13.15□□□□□ -0.3
HS3ST1-201ENST00000002596 PYROXD1Q8WU10 500 aa13.15□□□□□ -0.3
HS3ST1-201ENST00000002596 TESK2Q96S53 571 aa13.15□□□□□ -0.3
HS3ST1-201ENST00000002596 PCIF1Q9H4Z3 704 aa13.15□□□□□ -0.3
HS3ST1-201ENST00000002596 KLF15Q9UIH9 416 aa13.15□□□□□ -0.3
HS3ST1-201ENST00000002596 YEATS2Q9ULM3 1422 aa13.15□□□□□ -0.3
HS3ST1-201ENST00000002596 AGRPO00253 132 aa13.15□□□□□ -0.31
HS3ST1-201ENST00000002596 A1BGP04217 495 aa13.15□□□□□ -0.31
HS3ST1-201ENST00000002596 NUP93Q8N1F7 819 aa13.15□□□□□ -0.31
HS3ST1-201ENST00000002596 ARF3P61204 181 aaPredicted RBP13.14□□□□□ -0.31
HS3ST1-201ENST00000002596 NCALDP61601 193 aa13.14□□□□□ -0.31
HS3ST1-201ENST00000002596 ARF1P84077 181 aaKnown RBP13.14□□□□□ -0.31
HS3ST1-201ENST00000002596 COMMD2Q86X83 199 aa13.14□□□□□ -0.31
HS3ST1-201ENST00000002596 GINM1Q9NU53 330 aa13.14□□□□□ -0.31
HS3ST1-201ENST00000002596 GCNT4Q9P109 453 aa13.14□□□□□ -0.31
HS3ST1-201ENST00000002596 TRIM33Q9UPN9 1127 aa13.14□□□□□ -0.31
HS3ST1-201ENST00000002596 CCDC151A5D8V7 595 aa13.14□□□□□ -0.31
HS3ST1-201ENST00000002596 GOLGA8IPA6NC78 632 aa13.14□□□□□ -0.31
HS3ST1-201ENST00000002596 C5orf58C9J3I9 102 aa13.14□□□□□ -0.31
HS3ST1-201ENST00000002596 TRIM25Q14258 630 aaKnown RBP13.14□□□□□ -0.31
HS3ST1-201ENST00000002596 CCDC103Q8IW40 242 aa13.14□□□□□ -0.31
HS3ST1-201ENST00000002596 TSSK1BQ9BXA7 367 aa13.14□□□□□ -0.31
HS3ST1-201ENST00000002596 MRPL40Q9NQ50 206 aaKnown RBP13.14□□□□□ -0.31
HS3ST1-201ENST00000002596 LEMD3Q9Y2U8 911 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms