RNA–Protein interactions for RNA: ENSMUST00000078409.4

Trim61-201, Transcript of MCG22896, isoform CRA_b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim61, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim61-201ENSMUST00000078409 InscQ3HNM7 579 aa11.52□□□□□ -0.56
Trim61-201ENSMUST00000078409 Klhdc9Q3USL1 350 aa11.52□□□□□ -0.56
Trim61-201ENSMUST00000078409 Cage1Q5IR70 849 aa11.52□□□□□ -0.56
Trim61-201ENSMUST00000078409 Nacc1Q7TSZ8 514 aa11.52□□□□□ -0.56
Trim61-201ENSMUST00000078409 Tmtc4Q8BG19 741 aa11.52□□□□□ -0.56
Trim61-201ENSMUST00000078409 Psd4Q8BLR5 1005 aa11.52□□□□□ -0.56
Trim61-201ENSMUST00000078409 Maats1Q8BRC6 783 aa11.52□□□□□ -0.56
Trim61-201ENSMUST00000078409 Mterf4Q8BVN4 346 aa11.52□□□□□ -0.56
Trim61-201ENSMUST00000078409 Galnt5Q8C102 930 aa11.52□□□□□ -0.56
Trim61-201ENSMUST00000078409 Slc4a8Q8JZR6 1089 aa11.52□□□□□ -0.56
Trim61-201ENSMUST00000078409 Rnf167Q91XF4 347 aa11.52□□□□□ -0.56
Trim61-201ENSMUST00000078409 Nrif1Q923B3 828 aa11.52□□□□□ -0.56
Trim61-201ENSMUST00000078409 Psip1Q99JF8 528 aaKnown RBP11.52□□□□□ -0.56
Trim61-201ENSMUST00000078409 Wdr45bQ9CR39 344 aa11.52□□□□□ -0.56
Trim61-201ENSMUST00000078409 Fsip1Q9D3V5 435 aa11.52□□□□□ -0.56
Trim61-201ENSMUST00000078409 PhaxQ9JJT9 385 aaKnown RBP11.52□□□□□ -0.56
Trim61-201ENSMUST00000078409 GsdmeQ9Z2D3 512 aa11.52□□□□□ -0.56
Trim61-201ENSMUST00000078409 Fkbp1bQ9Z2I2 108 aa11.52□□□□□ -0.56
Trim61-201ENSMUST00000078409 Gm3409A0A0G2JE67 319 aa11.52□□□□□ -0.57
Trim61-201ENSMUST00000078409 Cyp4a32A2A8T1 509 aa11.52□□□□□ -0.57
Trim61-201ENSMUST00000078409 1700003F12RikA2AKE5 210 aa11.52□□□□□ -0.57
Trim61-201ENSMUST00000078409 Apol7bB1AQP7 369 aa11.52□□□□□ -0.57
Trim61-201ENSMUST00000078409 Hsbp1l1B2RXB2 72 aa11.52□□□□□ -0.57
Trim61-201ENSMUST00000078409 Gm1141B9EJU1 475 aa11.52□□□□□ -0.57
Trim61-201ENSMUST00000078409 Myo1eE9Q634 1107 aa11.52□□□□□ -0.57
Trim61-201ENSMUST00000078409 1600015I10RikE9Q745 711 aa11.52□□□□□ -0.57
Trim61-201ENSMUST00000078409 Gm21833J3QPK1 500 aa11.52□□□□□ -0.57
Trim61-201ENSMUST00000078409 Pa2g4P50580 394 aaKnown RBP11.52□□□□□ -0.57
Trim61-201ENSMUST00000078409 GuloP58710 440 aa11.52□□□□□ -0.57
Trim61-201ENSMUST00000078409 Nploc4P60670 608 aa11.52□□□□□ -0.57
Trim61-201ENSMUST00000078409 Casp4P70343 373 aa11.52□□□□□ -0.57
Trim61-201ENSMUST00000078409 CrtamQ149L7 389 aa11.52□□□□□ -0.57
Trim61-201ENSMUST00000078409 Rnf157Q3TEL6 685 aa11.52□□□□□ -0.57
Trim61-201ENSMUST00000078409 Apol7eQ3UZ24 369 aa11.52□□□□□ -0.57
Trim61-201ENSMUST00000078409 Cdcp1Q5U462 833 aa11.52□□□□□ -0.57
Trim61-201ENSMUST00000078409 Stxbp3Q60770 592 aa11.52□□□□□ -0.57
Trim61-201ENSMUST00000078409 CtcfQ61164 736 aaKnown RBP11.52□□□□□ -0.57
Trim61-201ENSMUST00000078409 Zfp90Q61967 636 aa11.52□□□□□ -0.57
Trim61-201ENSMUST00000078409 Fndc3bQ6NWW9 1207 aaKnown RBP11.52□□□□□ -0.57
Trim61-201ENSMUST00000078409 Tmco6Q8BQX5 494 aa11.52□□□□□ -0.57
Trim61-201ENSMUST00000078409 Pgm2l1Q8CAA7 621 aa11.52□□□□□ -0.57
Trim61-201ENSMUST00000078409 Taco1Q8K0Z7 294 aaKnown RBP11.52□□□□□ -0.57
Trim61-201ENSMUST00000078409 Brd3Q8K2F0 726 aaKnown RBP11.52□□□□□ -0.57
Trim61-201ENSMUST00000078409 Rpap2Q8VC34 614 aa11.52□□□□□ -0.57
Trim61-201ENSMUST00000078409 Pcdhb3Q91XZ7 784 aa11.52□□□□□ -0.57
Trim61-201ENSMUST00000078409 Pcdha3Q91Y16 942 aa11.52□□□□□ -0.57
Trim61-201ENSMUST00000078409 Tas1r3Q925D8 858 aa11.52□□□□□ -0.57
Trim61-201ENSMUST00000078409 NptxrQ99J85 493 aa11.52□□□□□ -0.57
Trim61-201ENSMUST00000078409 Tlcd1Q99JT6 247 aa11.52□□□□□ -0.57
Trim61-201ENSMUST00000078409 Gdap2Q9DBL2 498 aa11.52□□□□□ -0.57
Trim61-201ENSMUST00000078409 Utp3Q9JI13 469 aaKnown RBP11.52□□□□□ -0.57
Trim61-201ENSMUST00000078409 Epb41l3Q9WV92 929 aa11.52□□□□□ -0.57
Trim61-201ENSMUST00000078409 Disp2Q8CIP5 1345 aa11.51□□□□□ -0.57
Trim61-201ENSMUST00000078409 Pramef17A2ASJ1 475 aa11.51□□□□□ -0.57
Trim61-201ENSMUST00000078409 Kifc3O35231 824 aa11.51□□□□□ -0.57
Trim61-201ENSMUST00000078409 Cbfa2t2O70374 594 aa11.51□□□□□ -0.57
Trim61-201ENSMUST00000078409 Kif5aP33175 1027 aa11.51□□□□□ -0.57
Trim61-201ENSMUST00000078409 Tars2Q3UQ84 723 aaKnown RBP11.51□□□□□ -0.57
Trim61-201ENSMUST00000078409 Tnni3kQ5GIG6 834 aa11.51□□□□□ -0.57
Trim61-201ENSMUST00000078409 Ddx10Q80Y44 875 aaKnown RBP11.51□□□□□ -0.57
Trim61-201ENSMUST00000078409 Ece2Q80Z60 881 aa11.51□□□□□ -0.57
Trim61-201ENSMUST00000078409 Tspan9Q8BJU2 239 aa11.51□□□□□ -0.57
Trim61-201ENSMUST00000078409 Larp6Q8BN59 492 aa11.51□□□□□ -0.57
Trim61-201ENSMUST00000078409 Kcnv2Q8CFS6 562 aa11.51□□□□□ -0.57
Trim61-201ENSMUST00000078409 Casc3Q8K3W3 698 aaKnown RBP11.51□□□□□ -0.57
Trim61-201ENSMUST00000078409 Trib2Q8K4K3 343 aa11.51□□□□□ -0.57
Trim61-201ENSMUST00000078409 Dennd2dQ91VV4 469 aa11.51□□□□□ -0.57
Trim61-201ENSMUST00000078409 Snw1Q9CSN1 536 aaKnown RBP11.51□□□□□ -0.57
Trim61-201ENSMUST00000078409 Nsmce1Q9D720 266 aa11.51□□□□□ -0.57
Trim61-201ENSMUST00000078409 Dbn1Q9QXS6 706 aa11.51□□□□□ -0.57
Trim61-201ENSMUST00000078409 Sept6Q9R1T4 434 aa11.51□□□□□ -0.57
Trim61-201ENSMUST00000078409 Scgb2b21A0A087WQA9 112 aa11.5□□□□□ -0.57
Trim61-201ENSMUST00000078409 Cylc2B1AWN8 422 aa11.5□□□□□ -0.57
Trim61-201ENSMUST00000078409 NfkbieO54910 364 aa11.5□□□□□ -0.57
Trim61-201ENSMUST00000078409 Axin2O88566 840 aa11.5□□□□□ -0.57
Trim61-201ENSMUST00000078409 Vcam1P29533 739 aa11.5□□□□□ -0.57
Trim61-201ENSMUST00000078409 Rab12P35283 243 aa11.5□□□□□ -0.57
Trim61-201ENSMUST00000078409 Timm10P62073 90 aa11.5□□□□□ -0.57
Trim61-201ENSMUST00000078409 Surf6P70279 355 aaKnown RBP11.5□□□□□ -0.57
Trim61-201ENSMUST00000078409 Tex35Q14BK3 207 aa11.5□□□□□ -0.57
Trim61-201ENSMUST00000078409 Hsdl2Q2TPA8 490 aaKnown RBP11.5□□□□□ -0.57
Trim61-201ENSMUST00000078409 Nhej1Q3KNJ2 295 aa11.5□□□□□ -0.57
Trim61-201ENSMUST00000078409 Smcr8Q3UMB5 935 aa11.5□□□□□ -0.57
Trim61-201ENSMUST00000078409 Skap2Q3UND0 358 aa11.5□□□□□ -0.57
Trim61-201ENSMUST00000078409 D630036H23RikQ3UQD6 204 aa11.5□□□□□ -0.57
Trim61-201ENSMUST00000078409 Nsrp1Q5NCR9 542 aa11.5□□□□□ -0.57
Trim61-201ENSMUST00000078409 Fam169aQ5XG69 665 aa11.5□□□□□ -0.57
Trim61-201ENSMUST00000078409 Abtb2Q7TQI7 1024 aa11.5□□□□□ -0.57
Trim61-201ENSMUST00000078409 Ube3cQ80U95 1083 aa11.5□□□□□ -0.57
Trim61-201ENSMUST00000078409 Polr2eQ80UW8 210 aaKnown RBP11.5□□□□□ -0.57
Trim61-201ENSMUST00000078409 Pkn2Q8BWW9 983 aa11.5□□□□□ -0.57
Trim61-201ENSMUST00000078409 Traf3ip3Q8C0G2 513 aa11.5□□□□□ -0.57
Trim61-201ENSMUST00000078409 Rbm14Q8C2Q3 669 aaKnown RBP11.5□□□□□ -0.57
Trim61-201ENSMUST00000078409 Acap1Q8K2H4 740 aa11.5□□□□□ -0.57
Trim61-201ENSMUST00000078409 Gpsm2Q8VDU0 679 aa11.5□□□□□ -0.57
Trim61-201ENSMUST00000078409 Ints12Q9D168 461 aa11.5□□□□□ -0.57
Trim61-201ENSMUST00000078409 Ppil6Q9D6D8 278 aa11.5□□□□□ -0.57
Trim61-201ENSMUST00000078409 Capn12Q9ER56 720 aa11.5□□□□□ -0.57
Trim61-201ENSMUST00000078409 Tacc2Q9JJG0 1149 aa11.5□□□□□ -0.57
Trim61-201ENSMUST00000078409 Asap1Q9QWY8 1147 aa11.5□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 61.9 ms