RNA–Protein interactions for RNA: ENSMUST00000062439.4

Ccdc54-201, Transcript of Coiled-coil domain-containing protein 54, mousemouse

APPRIS P1 BASIC

Gene Ccdc54, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc54-201ENSMUST00000062439 Fbxo41Q6NS60 873 aa8.96□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 PigvQ7TPN3 493 aa8.96□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Dtx3Q80V91 347 aa8.96□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 NapepldQ8BH82 396 aa8.96□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Ldhal6bQ8BVP2 382 aa8.96□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Olfr805Q8VFI4 319 aa8.96□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 CarfQ8VHI4 689 aa8.96□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Stard13Q923Q2 1113 aa8.96□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 RpainQ9CWY9 219 aa8.96□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Armcx1Q9CX83 456 aa8.96□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Jmjd6Q9ERI5 403 aa8.96□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Plag1Q9QYE0 499 aa8.96□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 TfebQ9R210 475 aa8.96□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Rprd2Q6NXI6 1469 aaKnown RBP8.96□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Dot1lQ6XZL8 1540 aa8.95□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Plxnc1Q9QZC2 1574 aa8.95□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Cfap77A0A087WRI3 283 aa8.95□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Gm16368A0A1Y7VNG9 144 aa8.95□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Ccer2J3QPU5 274 aa8.95□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 EnamO55196 1274 aa8.95□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Srpk1O70551 648 aaKnown RBP8.95□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Il12rb2P97378 874 aa8.95□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 DbpQ60925 325 aa8.95□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Ptger2Q62053 362 aa8.95□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Igdcc3Q8BQC3 813 aa8.95□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Pgm2l1Q8CAA7 621 aa8.95□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Atp1b4Q99ME6 356 aa8.95□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Zfp773Q9CZ29 471 aa8.95□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Sp2Q9D2H6 612 aa8.95□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Slc26a3Q9WVC8 757 aa8.95□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Iqsec2Q5DU25 1478 aa8.95□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Vsig10l2A0A140LHF2 776 aa8.94□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Zfp277E9Q6D6 583 aaKnown RBP8.94□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Fmr1P35922 614 aaKnown RBP8.94□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Nkx3-2P97503 333 aa8.94□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Otud5Q3U2S4 566 aa8.94□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Apobec4Q497M3 374 aa8.94□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Gja3Q64448 417 aa8.94□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Lrp12Q8BUJ9 858 aa8.94□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Frs3Q91WJ0 492 aa8.94□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 BrapQ99MP8 591 aa8.94□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Osbpl5Q9ER64 874 aa8.94□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 PalldQ9ET54 1408 aa8.94□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Slit3Q9WVB4 1523 aa8.94□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Tbkbp1A2A9T0 611 aa8.93□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Ankle1A8VU90 534 aa8.93□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Tmem240B2RWJ3 173 aa8.93□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Vmn2r19G5E8G4 854 aa8.93□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 GlrbP48168 496 aa8.93□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Pld2P97813 933 aa8.93□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Srsf2Q62093 221 aaKnown RBP8.93□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Chst14Q80V53 376 aa8.93□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Rusc1Q8BG26 893 aa8.93□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 AnlnQ8K298 1121 aaKnown RBP8.93□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Olfr806Q8VFI2 313 aa8.93□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Mark1Q8VHJ5 795 aa8.93□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Luc7lQ9CYI4 371 aaKnown RBP8.93□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Phf6Q9D4J7 364 aa8.93□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Phtf1Q9QZ09 761 aa8.93□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Dhx9O70133 1380 aaKnown RBP8.93□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Ppip5k1A2ARP1 1436 aa8.93□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 AatkQ80YE4 1365 aa8.92□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Odf2A3KGV1 830 aaKnown RBP8.92□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 AlbP07724 608 aa8.92□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Rundc1Q0VDN7 615 aa8.92□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 InavaQ7TN12 663 aa8.92□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Cpeb4Q7TN98 729 aaKnown RBP8.92□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Cpeb3Q7TN99 716 aa8.92□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Flywch1Q8CI03 673 aa8.92□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Akap8Q9DBR0 687 aaKnown RBP8.92□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Strn3Q9ERG2 796 aa8.92□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Jph3Q9ET77 744 aa8.92□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Col18a1P39061 1774 aa8.91□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Fpr-s1O08790 351 aa8.91□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Ptger1P35375 405 aa8.91□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Rhbdl3P58873 404 aa8.91□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Ddr1Q03146 911 aa8.91□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Gdf9Q07105 441 aa8.91□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Zfyve27Q3TXX3 415 aa8.91□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Adrbk2Q3UYH7 688 aa8.91□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Ttc9Q3V038 219 aa8.91□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Amer2Q8CCJ4 672 aa8.91□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Gm5591Q8CDK1 855 aa8.91□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Clrn1Q8K445 232 aa8.91□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Pcdhga11Q91XY8 933 aa8.91□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Trmt11Q9CWH5 460 aa8.91□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Rnf146Q9CZW6 359 aa8.91□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Cep89Q9CZX2 791 aa8.91□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Sil1Q9EPK6 465 aa8.91□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Unc13bQ9Z1N9 1602 aa8.91□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 MaddQ80U28 1577 aa8.9□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 1600015I10RikE9Q745 711 aa8.9□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Kcnq1P97414 668 aa8.9□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Syne3Q4FZC9 975 aa8.9□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Tmem65Q4VAE3 234 aa8.9□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Pla2g4fQ50L41 855 aa8.9□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Pex1Q5BL07 1284 aa8.9□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Arhgef2Q60875 985 aa8.9□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 MmeQ61391 750 aa8.9□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 ChpfQ6IQX7 774 aa8.9□□□□□ -0.98
Retrieved 100 of 22,080 RNA–protein pairs in 24.3 ms