RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Ubap1Q8BH48 502 aa12.16□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Q8R1Y2 203 aa12.16□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Rfc4Q99J62 364 aa12.16□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Pgm1Q9D0F9 562 aa12.16□□□□□ -0.46
Topbp1-201ENSMUST00000035164 TarsQ9D0R2 722 aaKnown RBP12.16□□□□□ -0.46
Topbp1-201ENSMUST00000035164 1700003F12RikA2AKE5 210 aa12.16□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Pon1P52430 355 aa12.16□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Cyth2P63034 400 aaKnown RBP12.16□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Oca2Q62052 833 aa12.16□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Calhm6Q8C9E8 313 aa12.16□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Hao1Q9WU19 370 aa12.16□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Card9A2AIV8 536 aa12.15□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Gja8P28236 440 aa12.15□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Dph1Q5NCQ5 438 aa12.15□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Rasa3Q60790 834 aa12.15□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Heatr3Q8BQM4 679 aa12.15□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Kcns3Q8BQZ8 491 aa12.15□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Slc44a4Q91VA1 707 aa12.15□□□□□ -0.46
Topbp1-201ENSMUST00000035164 FignQ9ERZ6 759 aa12.15□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Pard6bQ9JK83 371 aa12.15□□□□□ -0.46
Topbp1-201ENSMUST00000035164 S100a5P63084 93 aa12.15□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Pid1Q3UBG2 217 aa12.15□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Znf428Q8C1M2 176 aa12.15□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Ccdc137Q8R0K4 290 aaKnown RBP12.15□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Bcs1lQ9CZP5 418 aa12.15□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Llcfc1Q9D9P8 108 aa12.15□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Gys1Q9Z1E4 738 aaKnown RBP12.15□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Chd2E9PZM4 1827 aaKnown RBP12.15□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Esr2O08537 530 aa12.15□□□□□ -0.46
Topbp1-201ENSMUST00000035164 CflarO35732 481 aa12.15□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Ctnnal1O88327 731 aa12.15□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Akr1b8P45377 316 aa12.15□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Ccdc138Q0VF22 680 aa12.15□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Ttll1Q91V51 423 aa12.15□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Iqcf1Q9D9K8 182 aa12.15□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Xab2Q9DCD2 855 aaKnown RBP12.15□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Dlg5E9Q9R9 1921 aa12.15□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Frmpd4A2AFR3 1320 aa12.15□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Ccdc170D3YXL0 722 aa12.15□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Gm3893E9Q1I1 302 aa12.15□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Msh3P13705 1091 aa12.15□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Qrich1Q3UA37 777 aa12.15□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Mks1Q5SW45 561 aa12.15□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Btbd7Q8CFE5 1130 aa12.15□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Appl2Q8K3G9 662 aa12.15□□□□□ -0.46
Topbp1-201ENSMUST00000035164 HyiQ8R1F5 277 aa12.15□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Ccdc65Q8VHI7 493 aa12.15□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Sh3bp5lQ99LH9 392 aa12.15□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Epb41l3Q9WV92 929 aa12.15□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Lactbl1S4R213 581 aa12.15□□□□□ -0.46
Topbp1-201ENSMUST00000035164 Cops2P61202 443 aaKnown RBP12.14□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Zbtb16Q3UQ17 673 aa12.14□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Rhox12Q4TU81 186 aa12.14□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Orc2Q60862 576 aaKnown RBP12.14□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Clca4aQ6Q473 924 aa12.14□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Galnt17Q7TT15 598 aa12.14□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Ddhd1Q80YA3 547 aa12.14□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Uba6Q8C7R4 1053 aa12.14□□□□□ -0.47
Topbp1-201ENSMUST00000035164 HmcesQ8R1M0 353 aaKnown RBP12.14□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Ccdc80Q8R2G6 949 aa12.14□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Dtnbp1Q91WZ8 352 aa12.14□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Gm45194A0A140LJG2 572 aa12.14□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Tcp11x2A2AEI7 503 aa12.14□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Ccdc13D3YV10 709 aa12.14□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Adcy7P51829 1099 aa12.14□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Pfkfb2P70265 519 aa12.14□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Dact3Q0PHV7 610 aa12.14□□□□□ -0.47
Topbp1-201ENSMUST00000035164 CyldQ80TQ2 952 aa12.14□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Sgsm1Q8BPQ7 1093 aa12.14□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Lrrc4cQ8C031 640 aa12.14□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Pkn3Q8K045 878 aa12.14□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Ddah1Q9CWS0 285 aa12.14□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Chordc1Q9D1P4 331 aaKnown RBP12.14□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Eif2ak1Q9Z2R9 619 aa12.14□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Sh3tc1G3X9F6 1346 aa12.14□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Bfsp1A2AMT1 669 aa12.14□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Gm6588E9Q3K0 461 aa12.14□□□□□ -0.47
Topbp1-201ENSMUST00000035164 CopeO89079 308 aa12.14□□□□□ -0.47
Topbp1-201ENSMUST00000035164 HalP35492 657 aa12.14□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Tmem165P52875 323 aa12.14□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Cdk9Q99J95 372 aa12.14□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Sertad2Q9JJG5 309 aa12.14□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Gm11985A0A1B0GS61 206 aa12.14□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Klhl41A2AUC9 606 aa12.14□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Olfr247E9PVJ7 320 aa12.14□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Cyp4f40G3UW81 524 aa12.14□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Olfr819K7N727 320 aa12.14□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Sema3fO88632 785 aa12.14□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Sept2P42208 361 aaKnown RBP12.14□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Wdr41Q3UDP0 460 aa12.14□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Ccdc51Q3URS9 406 aa12.14□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Rimbp2Q80U40 1072 aa12.14□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Chmp2bQ8BJF9 213 aa12.14□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Nop9Q8BMC4 636 aaKnown RBP12.14□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Efl1Q8C0D5 1127 aa12.14□□□□□ -0.47
Topbp1-201ENSMUST00000035164 SucoQ8C341 1250 aa12.14□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Actl9Q8CG27 415 aa12.14□□□□□ -0.47
Topbp1-201ENSMUST00000035164 ArcQ9WV31 396 aa12.14□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Fxr2Q9WVR4 673 aaKnown RBP12.14□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Syngap1F6SEU4 1340 aa12.14□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 82.8 ms