RNA–Protein interactions for RNA: ENSMUST00000026740.5

Col7a1-201, Transcript of Collagen alpha-1(VII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col7a1, Length 9,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1-201ENSMUST00000026740 Pdzrn4E9PUZ9 1014 aa15.3■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Slc1a1P51906 523 aa15.3■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Slc16a1P53986 493 aa15.3■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Tmem247Q497K7 211 aa15.3■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Zcwpw1Q6IR42 630 aa15.3■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Krr1Q8BGA5 380 aaKnown RBP15.3■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Rcan1Q9JHG6 198 aa15.3■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Ttc17E9PVB5 1198 aa15.29■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Serpina1bP22599 413 aa15.29■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Serpind1P49182 478 aa15.29■□□□□ 0.04
Col7a1-201ENSMUST00000026740 PRAG1Q571I4 1179 aa15.29■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Samhd1Q60710 627 aa15.29■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Rbbp7Q60973 425 aaKnown RBP15.29■□□□□ 0.04
Col7a1-201ENSMUST00000026740 F13a1Q8BH61 732 aa15.29■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Nova2D3YVV7 556 aaKnown RBP15.29■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Hoxb8P09632 243 aa15.29■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Gimap4Q99JY3 219 aa15.29■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Dmap1Q9JI44 468 aa15.29■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Npas2P97460 816 aa15.29■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Deup1Q7M6Y5 601 aa15.29■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Dnajc6Q80TZ3 938 aa15.29■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Q8BWG4 1187 aa15.29■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Cadm1Q8R5M8 456 aaKnown RBP15.29■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Slc12a8Q8VI23 705 aa15.29■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Plcg1Q62077 1302 aa15.29■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Map7d3A2AEY4 876 aa15.29■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Myl1P05977 188 aa15.29■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Msx3P70354 204 aa15.29■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Zfp566Q8VCI1 386 aa15.29■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Tomm70Q9CZW5 611 aa15.29■□□□□ 0.04
Col7a1-201ENSMUST00000026740 NvlQ9DBY8 855 aaKnown RBP15.29■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Slc27a6E9Q9W4 619 aa15.29■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Slc9a2Q3ZAS0 814 aa15.29■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Adora1Q60612 326 aa15.29■□□□□ 0.04
Col7a1-201ENSMUST00000026740 PrcpQ7TMR0 491 aa15.29■□□□□ 0.04
Col7a1-201ENSMUST00000026740 FtoQ8BGW1 502 aa15.29■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Tmem206Q9D771 350 aa15.29■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Gm29276A0A087WNW5 222 aa15.29■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Gm21117A0A087WPJ9 222 aa15.29■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Gm20820A0A087WPP3 222 aa15.29■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Gm20937A0A087WQA3 222 aa15.29■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Gm21258A0A087WQC7 222 aa15.29■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Gm28102A0A087WQL3 222 aa15.29■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Gm21095A0A087WR14 222 aa15.29■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Gm20792A0A087WRF5 222 aa15.29■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Gm21865A0A087WRL2 222 aa15.29■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Gm28576A0A087WRP6 222 aa15.29■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Gm28490A0A087WRT9 222 aa15.29■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Gm21294A0A087WS79 222 aa15.29■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Gm20824A0A087WS97 222 aa15.29■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Gm21996A0A087WSS9 222 aa15.29■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Gm28870A0A0A6YW38 222 aa15.29■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Gm29866A0A0A6YX04 222 aa15.29■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Nt5c2Q3V1L4 560 aa15.29■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Gm21627Q810R0 219 aa15.29■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Tlr3Q99MB1 905 aa15.29■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Gid8Q9D7M1 228 aa15.29■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Orm2P07361 207 aa15.29■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Faf2Q3TDN2 445 aa15.29■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Mrps9Q9D7N3 390 aaKnown RBP15.29■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Gm21497A0A087WRK3 222 aa15.28■□□□□ 0.04
Col7a1-201ENSMUST00000026740 6030498E09RikB1AX85 169 aa15.28■□□□□ 0.04
Col7a1-201ENSMUST00000026740 1600015I10RikE9Q745 711 aa15.28■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Zfp91Q62511 572 aa15.28■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Tmem132cQ8CEF9 1099 aa15.28■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Utp6Q8VCY6 597 aaKnown RBP15.28■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Gmeb1Q9JL60 562 aa15.28■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Map3k19E9Q3S4 1311 aa15.28■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Spata32Q8C5V0 334 aa15.28■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Ranbp17Q99NF8 1088 aa15.28■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Slc4a9E9PUP3 929 aa15.28■□□□□ 0.04
Col7a1-201ENSMUST00000026740 G3bp2P97379 482 aaKnown RBP15.28■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Terb1Q8C0V1 768 aa15.28■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Abcf2Q99LE6 628 aaKnown RBP15.28■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Lrrc46Q9DAP0 323 aa15.28■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Fem1bQ9Z2G0 627 aa15.28■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Uhrf1bp1lA2RSJ4 1457 aa15.28■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Nos1Q9Z0J4 1429 aa15.28■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Abcb5B5X0E4 1255 aa15.28■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Pou5f1P20263 352 aaKnown RBP15.28■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Dnajc3Q91YW3 504 aa15.28■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Pdzd9Q9D9M4 266 aa15.28■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Sox6P40645 827 aa15.28■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Nek9Q8K1R7 984 aa15.28■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Znrd1-asQ8R0E5 213 aa15.28■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Bud13Q8R149 637 aa15.28■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Stx11Q9D3G5 287 aa15.28■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Scyl3Q9DBQ7 735 aa15.28■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Zfp558E9Q1J0 407 aa15.28■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Psmc1P62192 440 aa15.28■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Ccdc90bQ8C3X2 256 aa15.28■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Cnot3Q8K0V4 751 aaKnown RBP15.28■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Tph1P17532 447 aa15.28■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Sox5P35710 763 aa15.28■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Slitrk2Q810C0 846 aa15.28■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Prpf3Q922U1 683 aaKnown RBP15.28■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Rpn2Q9DBG6 631 aaKnown RBP15.28■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Yeats2Q3TUF7 1407 aa15.28■□□□□ 0.04
Col7a1-201ENSMUST00000026740 PuraP42669 321 aaKnown RBP15.28■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Mei4Q8BRM6 389 aa15.28■□□□□ 0.04
Retrieved 100 of 22,080 RNA–protein pairs in 17.3 ms