RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Pex19Q8VCI5 299 aa11.68□□□□□ -0.54
Msh3-201ENSMUST00000022220 Bag2Q91YN9 210 aa11.68□□□□□ -0.54
Msh3-201ENSMUST00000022220 Abhd2Q9QXM0 425 aa11.68□□□□□ -0.54
Msh3-201ENSMUST00000022220 Cdr2lA2A6T1 465 aa11.68□□□□□ -0.54
Msh3-201ENSMUST00000022220 Apol8A2VDH7 339 aaKnown RBP11.68□□□□□ -0.54
Msh3-201ENSMUST00000022220 Mms22lB1AUR6 1238 aa11.68□□□□□ -0.54
Msh3-201ENSMUST00000022220 Serpina1bP22599 413 aa11.68□□□□□ -0.54
Msh3-201ENSMUST00000022220 RcvrnP34057 202 aa11.68□□□□□ -0.54
Msh3-201ENSMUST00000022220 Pbx1P41778 430 aa11.68□□□□□ -0.54
Msh3-201ENSMUST00000022220 Kcnb1Q03717 857 aa11.68□□□□□ -0.54
Msh3-201ENSMUST00000022220 Nsun7Q14AW5 724 aa11.68□□□□□ -0.54
Msh3-201ENSMUST00000022220 Ttf2Q5NC05 1138 aa11.68□□□□□ -0.54
Msh3-201ENSMUST00000022220 Ccdc85aQ5SP85 500 aa11.68□□□□□ -0.54
Msh3-201ENSMUST00000022220 Slc17a8Q8BFU8 601 aa11.68□□□□□ -0.54
Msh3-201ENSMUST00000022220 Rab44Q8CB87 725 aa11.68□□□□□ -0.54
Msh3-201ENSMUST00000022220 Cwf19l1Q8CI33 537 aa11.68□□□□□ -0.54
Msh3-201ENSMUST00000022220 Ces4aQ8R0W5 563 aa11.68□□□□□ -0.54
Msh3-201ENSMUST00000022220 Cplx3Q8R1B5 158 aa11.68□□□□□ -0.54
Msh3-201ENSMUST00000022220 Rpap2Q8VC34 614 aa11.68□□□□□ -0.54
Msh3-201ENSMUST00000022220 Olfr390Q8VEZ7 311 aa11.68□□□□□ -0.54
Msh3-201ENSMUST00000022220 Dr1Q91WV0 176 aa11.68□□□□□ -0.54
Msh3-201ENSMUST00000022220 MlxiplQ99MZ3 864 aa11.68□□□□□ -0.54
Msh3-201ENSMUST00000022220 Golph3Q9CRA5 298 aa11.68□□□□□ -0.54
Msh3-201ENSMUST00000022220 Kcnh7Q9ER47 1195 aa11.68□□□□□ -0.54
Msh3-201ENSMUST00000022220 Rpf2Q9JJ80 306 aaKnown RBP11.68□□□□□ -0.54
Msh3-201ENSMUST00000022220 Scgb2b11A0A087WR49 112 aa11.68□□□□□ -0.54
Msh3-201ENSMUST00000022220 Aknad1E9Q8N6 675 aa11.68□□□□□ -0.54
Msh3-201ENSMUST00000022220 Tsta3P23591 321 aa11.68□□□□□ -0.54
Msh3-201ENSMUST00000022220 Kif5aP33175 1027 aa11.68□□□□□ -0.54
Msh3-201ENSMUST00000022220 Ccdc84Q4VA36 332 aaKnown RBP11.68□□□□□ -0.54
Msh3-201ENSMUST00000022220 Krt77Q6IFZ6 572 aa11.68□□□□□ -0.54
Msh3-201ENSMUST00000022220 Tlr13Q6R5N8 991 aa11.68□□□□□ -0.54
Msh3-201ENSMUST00000022220 TwistnbQ78WZ7 330 aaKnown RBP11.68□□□□□ -0.54
Msh3-201ENSMUST00000022220 Onecut3Q8K557 490 aa11.68□□□□□ -0.54
Msh3-201ENSMUST00000022220 Xpo5Q924C1 1204 aaKnown RBP11.68□□□□□ -0.54
Msh3-201ENSMUST00000022220 Usp11Q99K46 921 aa11.68□□□□□ -0.54
Msh3-201ENSMUST00000022220 Txnrd2Q9JLT4 524 aa11.68□□□□□ -0.54
Msh3-201ENSMUST00000022220 Dnajc7Q9QYI3 494 aa11.68□□□□□ -0.54
Msh3-201ENSMUST00000022220 Zfy1P10925 782 aa11.67□□□□□ -0.54
Msh3-201ENSMUST00000022220 Ddr1Q03146 911 aa11.67□□□□□ -0.54
Msh3-201ENSMUST00000022220 Vwa3aQ3UVV9 1148 aa11.67□□□□□ -0.54
Msh3-201ENSMUST00000022220 Vps41Q5KU39 853 aa11.67□□□□□ -0.54
Msh3-201ENSMUST00000022220 Acad11Q80XL6 779 aa11.67□□□□□ -0.54
Msh3-201ENSMUST00000022220 Ccdc28aQ8CEI3 192 aa11.67□□□□□ -0.54
Msh3-201ENSMUST00000022220 Syne4Q8CII8 388 aa11.67□□□□□ -0.54
Msh3-201ENSMUST00000022220 OplahQ8K010 1288 aa11.67□□□□□ -0.54
Msh3-201ENSMUST00000022220 P3h4Q8K2B0 443 aa11.67□□□□□ -0.54
Msh3-201ENSMUST00000022220 Lgi2Q8K4Z0 550 aa11.67□□□□□ -0.54
Msh3-201ENSMUST00000022220 Nmrk1Q91W63 195 aa11.67□□□□□ -0.54
Msh3-201ENSMUST00000022220 Mettl13Q91YR5 698 aa11.67□□□□□ -0.54
Msh3-201ENSMUST00000022220 Bco2Q99NF1 532 aa11.67□□□□□ -0.54
Msh3-201ENSMUST00000022220 Hsd3b7Q9EQC1 369 aa11.67□□□□□ -0.54
Msh3-201ENSMUST00000022220 Twf2Q9Z0P5 349 aaKnown RBP11.67□□□□□ -0.54
Msh3-201ENSMUST00000022220 Gm28360A0A087WR25 190 aa11.67□□□□□ -0.54
Msh3-201ENSMUST00000022220 Cep85lA0A1W2P884 806 aa11.67□□□□□ -0.54
Msh3-201ENSMUST00000022220 Speer2E9Q9U2 264 aa11.67□□□□□ -0.54
Msh3-201ENSMUST00000022220 Hsd17b1P51656 344 aa11.67□□□□□ -0.54
Msh3-201ENSMUST00000022220 Gbp1Q01514 589 aa11.67□□□□□ -0.54
Msh3-201ENSMUST00000022220 Zscan2Q07230 614 aa11.67□□□□□ -0.54
Msh3-201ENSMUST00000022220 Plekha7Q3UIL6 1118 aaKnown RBP11.67□□□□□ -0.54
Msh3-201ENSMUST00000022220 SlmapQ3URD3 845 aa11.67□□□□□ -0.54
Msh3-201ENSMUST00000022220 EregQ61521 162 aa11.67□□□□□ -0.54
Msh3-201ENSMUST00000022220 Q8BGN9 141 aa11.67□□□□□ -0.54
Msh3-201ENSMUST00000022220 Gbp9Q8BTS3 619 aa11.67□□□□□ -0.54
Msh3-201ENSMUST00000022220 GancQ8BVW0 898 aa11.67□□□□□ -0.54
Msh3-201ENSMUST00000022220 Ccdc87Q8CDL9 855 aa11.67□□□□□ -0.54
Msh3-201ENSMUST00000022220 Btbd7Q8CFE5 1130 aa11.67□□□□□ -0.54
Msh3-201ENSMUST00000022220 Eif2b5Q8CHW4 717 aa11.67□□□□□ -0.54
Msh3-201ENSMUST00000022220 Ccdc80Q8R2G6 949 aa11.67□□□□□ -0.54
Msh3-201ENSMUST00000022220 Slc25a38Q91XD8 326 aa11.67□□□□□ -0.54
Msh3-201ENSMUST00000022220 Q922C1 641 aa11.67□□□□□ -0.54
Msh3-201ENSMUST00000022220 Mmtag2Q99LX5 260 aaKnown RBP11.67□□□□□ -0.54
Msh3-201ENSMUST00000022220 Aldh1b1Q9CZS1 519 aa11.67□□□□□ -0.54
Msh3-201ENSMUST00000022220 Mms19Q9D071 1031 aa11.67□□□□□ -0.54
Msh3-201ENSMUST00000022220 Krt20Q9D312 431 aa11.67□□□□□ -0.54
Msh3-201ENSMUST00000022220 Inpp4aQ9EPW0 939 aa11.67□□□□□ -0.54
Msh3-201ENSMUST00000022220 IdeQ9JHR7 1019 aa11.67□□□□□ -0.54
Msh3-201ENSMUST00000022220 PltpP55065 493 aa11.67□□□□□ -0.54
Msh3-201ENSMUST00000022220 YdjcQ14BV6 310 aa11.67□□□□□ -0.54
Msh3-201ENSMUST00000022220 Mysm1Q69Z66 819 aa11.67□□□□□ -0.54
Msh3-201ENSMUST00000022220 Cacna2d2Q6PHS9 1154 aa11.67□□□□□ -0.54
Msh3-201ENSMUST00000022220 Pnma1Q8C1C8 353 aa11.67□□□□□ -0.54
Msh3-201ENSMUST00000022220 Bbs7Q8K2G4 715 aa11.67□□□□□ -0.54
Msh3-201ENSMUST00000022220 Stap2Q8R0L1 411 aa11.67□□□□□ -0.54
Msh3-201ENSMUST00000022220 LrmdaQ9D9B4 229 aa11.67□□□□□ -0.54
Msh3-201ENSMUST00000022220 Rsph3bQ9DA80 389 aa11.67□□□□□ -0.54
Msh3-201ENSMUST00000022220 Tlr9Q9EQU3 1032 aa11.67□□□□□ -0.54
Msh3-201ENSMUST00000022220 Myh1Q5SX40 1942 aa11.67□□□□□ -0.54
Msh3-201ENSMUST00000022220 Bend4P86174 541 aa11.67□□□□□ -0.54
Msh3-201ENSMUST00000022220 Etv6P97360 485 aa11.67□□□□□ -0.54
Msh3-201ENSMUST00000022220 Rsad1Q5SUV1 442 aa11.67□□□□□ -0.54
Msh3-201ENSMUST00000022220 Rasa3Q60790 834 aa11.67□□□□□ -0.54
Msh3-201ENSMUST00000022220 Trim65Q8BFW4 522 aa11.67□□□□□ -0.54
Msh3-201ENSMUST00000022220 Nrbp2Q91V36 499 aa11.67□□□□□ -0.54
Msh3-201ENSMUST00000022220 Rhobtb2Q91V93 728 aa11.67□□□□□ -0.54
Msh3-201ENSMUST00000022220 Zcchc8Q9CYA6 709 aaKnown RBP11.67□□□□□ -0.54
Msh3-201ENSMUST00000022220 MymkQ9D1N4 221 aa11.67□□□□□ -0.54
Msh3-201ENSMUST00000022220 Zfyve19Q9DAZ9 389 aa11.67□□□□□ -0.54
Msh3-201ENSMUST00000022220 Scnn1bQ9WU38 638 aa11.67□□□□□ -0.54
Msh3-201ENSMUST00000022220 Nfx1B1AY10 1114 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 29.6 ms