RNA–Protein interactions for RNA: ENST00000642077.1

CASC19-276, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 993 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-276ENST00000642077 CADPS2Q86UW7 1296 aa13.09□□□□□ -0.31
CASC19-276ENST00000642077 BHMG1C9JSJ3 638 aaPredicted RBP13.08□□□□□ -0.32
CASC19-276ENST00000642077 WDR70Q9NW82 654 aa13.08□□□□□ -0.32
CASC19-276ENST00000642077 KCTD12Q96CX2 325 aaKnown RBP13.07□□□□□ -0.32
CASC19-276ENST00000642077 UNC13AQ9UPW8 1703 aa13.07□□□□□ -0.32
CASC19-276ENST00000642077 PTPREP23469 700 aa13.06□□□□□ -0.32
CASC19-276ENST00000642077 NBR1Q14596 966 aa13.06□□□□□ -0.32
CASC19-276ENST00000642077 P3H3Q8IVL6 736 aa13.06□□□□□ -0.32
CASC19-276ENST00000642077 ZBED2Q9BTP6 218 aa13.06□□□□□ -0.32
CASC19-276ENST00000642077 RSF1Q96T23 1441 aaPredicted RBP13.05□□□□□ -0.32
CASC19-276ENST00000642077 EMILIN3Q9NT22 766 aa13.05□□□□□ -0.32
CASC19-276ENST00000642077 ZDHHC16Q969W1 377 aa13.04□□□□□ -0.32
CASC19-276ENST00000642077 STAC3Q96MF2 364 aa13.03□□□□□ -0.32
CASC19-276ENST00000642077 ADAM33Q9BZ11 813 aa13.03□□□□□ -0.32
CASC19-276ENST00000642077 MAP3K9P80192 1104 aa12.99□□□□□ -0.33
CASC19-276ENST00000642077 BAZ1AQ9NRL2 1556 aaPredicted RBP12.97□□□□□ -0.33
CASC19-276ENST00000642077 THSD4Q6ZMP0 1018 aa12.96□□□□□ -0.33
CASC19-276ENST00000642077 PCDHGA10Q9Y5H3 936 aa12.96□□□□□ -0.33
CASC19-276ENST00000642077 CAMK2BQ13554 666 aa12.95□□□□□ -0.34
CASC19-276ENST00000642077 PPP1R3GB7ZBB8 358 aa12.94□□□□□ -0.34
CASC19-276ENST00000642077 IFFO2Q5TF58 517 aa12.94□□□□□ -0.34
CASC19-276ENST00000642077 CECR2Q9BXF3 1484 aa12.93□□□□□ -0.34
CASC19-276ENST00000642077 MROH2BQ7Z745 1585 aa12.92□□□□□ -0.34
CASC19-276ENST00000642077 MRPL50Q8N5N7 158 aaKnown RBP12.92□□□□□ -0.34
CASC19-276ENST00000642077 BICRAQ9NZM4 1560 aa12.91□□□□□ -0.34
CASC19-276ENST00000642077 PHF14O94880 888 aa12.91□□□□□ -0.34
CASC19-276ENST00000642077 KCNV2Q8TDN2 545 aa12.91□□□□□ -0.34
CASC19-276ENST00000642077 NBPF3Q9H094 633 aa12.91□□□□□ -0.34
CASC19-276ENST00000642077 PTPN5P54829 565 aa12.9□□□□□ -0.34
CASC19-276ENST00000642077 FBXW7Q969H0 707 aa12.9□□□□□ -0.34
CASC19-276ENST00000642077 E2F4Q16254 413 aa12.89□□□□□ -0.35
CASC19-276ENST00000642077 WNT2BQ93097 391 aa12.89□□□□□ -0.35
CASC19-276ENST00000642077 TYW1BQ6NUM6 668 aa12.88□□□□□ -0.35
CASC19-276ENST00000642077 RABGEF1Q9UJ41 708 aa12.88□□□□□ -0.35
CASC19-276ENST00000642077 COL9A1P20849 921 aa12.87□□□□□ -0.35
CASC19-276ENST00000642077 SMARCA4P51532 1647 aa12.87□□□□□ -0.35
CASC19-276ENST00000642077 ARHGEF1Q92888 912 aaKnown RBP12.86□□□□□ -0.35
CASC19-276ENST00000642077 GOLGA8CPA6NN73 597 aa12.85□□□□□ -0.35
CASC19-276ENST00000642077 PROX2Q3B8N5 592 aa12.84□□□□□ -0.35
CASC19-276ENST00000642077 EPAS1Q99814 870 aa12.82□□□□□ -0.36
CASC19-276ENST00000642077 WIZO95785 1651 aa12.81□□□□□ -0.36
CASC19-276ENST00000642077 DPYSL4O14531 572 aa12.8□□□□□ -0.36
CASC19-276ENST00000642077 ONECUT3O60422 494 aaPredicted RBP12.8□□□□□ -0.36
CASC19-276ENST00000642077 RGS20O76081 388 aa12.8□□□□□ -0.36
CASC19-276ENST00000642077 LAPTM4BQ86VI4 370 aa12.8□□□□□ -0.36
CASC19-276ENST00000642077 TPRNQ4KMQ1 711 aa12.78□□□□□ -0.36
CASC19-276ENST00000642077 ARIH1Q9Y4X5 557 aaPredicted RBP12.78□□□□□ -0.36
CASC19-276ENST00000642077 TOP2AP11388 1531 aaKnown RBP12.78□□□□□ -0.36
CASC19-276ENST00000642077 PEG3Q9GZU2 1588 aa12.77□□□□□ -0.36
CASC19-276ENST00000642077 C6orf132Q5T0Z8 1188 aa12.77□□□□□ -0.37
CASC19-276ENST00000642077 A0A0G2JS52 829 aa12.76□□□□□ -0.37
CASC19-276ENST00000642077 ANKK1Q8NFD2 765 aa12.76□□□□□ -0.37
CASC19-276ENST00000642077 PRKCSHP14314 528 aaPredicted RBP12.74□□□□□ -0.37
CASC19-276ENST00000642077 KIAA1468Q9P260 1216 aa12.74□□□□□ -0.37
CASC19-276ENST00000642077 ITGBL1O95965 494 aaPredicted RBP12.73□□□□□ -0.37
CASC19-276ENST00000642077 SOWAHBA6NEL2 793 aa12.72□□□□□ -0.37
CASC19-276ENST00000642077 PDIA6Q15084 440 aa12.72□□□□□ -0.37
CASC19-276ENST00000642077 TRIM6-TRIM34B2RNG4 842 aa12.71□□□□□ -0.37
CASC19-276ENST00000642077 ZFRQ96KR1 1074 aaKnown RBP12.71□□□□□ -0.37
CASC19-276ENST00000642077 TULP1O00294 542 aaPredicted RBP12.7□□□□□ -0.38
CASC19-276ENST00000642077 BCAMP50895 628 aa12.7□□□□□ -0.38
CASC19-276ENST00000642077 NYAP1Q6ZVC0 841 aa12.69□□□□□ -0.38
CASC19-276ENST00000642077 DDX12PQ92771 950 aa12.68□□□□□ -0.38
CASC19-276ENST00000642077 EN1Q05925 392 aaPredicted RBP12.67□□□□□ -0.38
CASC19-276ENST00000642077 EIF4G1Q04637 1599 aaKnown RBP12.66□□□□□ -0.38
CASC19-276ENST00000642077 FAM98CQ17RN3 349 aaKnown RBP12.66□□□□□ -0.38
CASC19-276ENST00000642077 SPDYE16A6NNV3 312 aaPredicted RBP12.65□□□□□ -0.38
CASC19-276ENST00000642077 RBM33Q96EV2 1170 aaKnown RBP12.65□□□□□ -0.38
CASC19-276ENST00000642077 SEPT9Q9UHD8 586 aaPredicted RBP12.65□□□□□ -0.38
CASC19-276ENST00000642077 SMARCA2P51531 1590 aa12.64□□□□□ -0.39
CASC19-276ENST00000642077 TESPA1A2RU30 521 aaPredicted RBP12.63□□□□□ -0.39
CASC19-276ENST00000642077 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.63□□□□□ -0.39
CASC19-276ENST00000642077 WBP1LQ9NX94 342 aa12.63□□□□□ -0.39
CASC19-276ENST00000642077 TSKSQ9UJT2 592 aa12.62□□□□□ -0.39
CASC19-276ENST00000642077 SEMA3EO15041 775 aa12.61□□□□□ -0.39
CASC19-276ENST00000642077 TSR1Q2NL82 804 aaKnown RBP12.61□□□□□ -0.39
CASC19-276ENST00000642077 SMYD5Q6GMV2 418 aa12.61□□□□□ -0.39
CASC19-276ENST00000642077 LMOD2Q6P5Q4 547 aa12.6□□□□□ -0.39
CASC19-276ENST00000642077 MAP3K7O43318 606 aa12.58□□□□□ -0.4
CASC19-276ENST00000642077 ATAD2BQ9ULI0 1458 aa12.58□□□□□ -0.4
CASC19-276ENST00000642077 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.57□□□□□ -0.4
CASC19-276ENST00000642077 TSR3Q9UJK0 312 aaKnown RBP12.57□□□□□ -0.4
CASC19-276ENST00000642077 CCDC88BA6NC98 1476 aa12.57□□□□□ -0.4
CASC19-276ENST00000642077 PRIM1P49642 420 aaKnown RBP12.56□□□□□ -0.4
CASC19-276ENST00000642077 PACS2Q86VP3 889 aa12.55□□□□□ -0.4
CASC19-276ENST00000642077 LRCH3Q96II8 777 aa12.55□□□□□ -0.4
CASC19-276ENST00000642077 IRX2Q9BZI1 471 aaPredicted RBP12.54□□□□□ -0.4
CASC19-276ENST00000642077 KCNC4Q03721 635 aa12.53□□□□□ -0.4
CASC19-276ENST00000642077 CERKQ8TCT0 537 aa12.53□□□□□ -0.4
CASC19-276ENST00000642077 FAM198AQ9UFP1 575 aa12.53□□□□□ -0.4
CASC19-276ENST00000642077 HPS5Q9UPZ3 1129 aa12.53□□□□□ -0.4
CASC19-276ENST00000642077 HMGXB3Q12766 1538 aa12.52□□□□□ -0.4
CASC19-276ENST00000642077 PRSS12P56730 875 aa12.52□□□□□ -0.41
CASC19-276ENST00000642077 CDCA7LQ96GN5 454 aa12.52□□□□□ -0.41
CASC19-276ENST00000642077 BAZ1BQ9UIG0 1483 aaKnown RBP12.51□□□□□ -0.41
CASC19-276ENST00000642077 OSBPP22059 807 aa12.48□□□□□ -0.41
CASC19-276ENST00000642077 NCAPD3P42695 1498 aa12.47□□□□□ -0.41
CASC19-276ENST00000642077 C3orf80F5H4A9 247 aa12.47□□□□□ -0.41
CASC19-276ENST00000642077 RBM27Q9P2N5 1060 aaKnown RBP12.47□□□□□ -0.41
CASC19-276ENST00000642077 GRXCR2A6NFK2 248 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms