RNA–Protein interactions for RNA: ENST00000641853.1

CASC19-261, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,638 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-261ENST00000641853 AXIN2Q9Y2T1 843 aa12.49□□□□□ -0.41
CASC19-261ENST00000641853 LMOD2Q6P5Q4 547 aa12.48□□□□□ -0.41
CASC19-261ENST00000641853 CDHR5Q9HBB8 845 aa12.48□□□□□ -0.41
CASC19-261ENST00000641853 PSEN2P49810 448 aa12.46□□□□□ -0.41
CASC19-261ENST00000641853 TULP1O00294 542 aaPredicted RBP12.45□□□□□ -0.42
CASC19-261ENST00000641853 KCNK17Q96T54 332 aa12.45□□□□□ -0.42
CASC19-261ENST00000641853 COL9A1P20849 921 aa12.44□□□□□ -0.42
CASC19-261ENST00000641853 PTPREP23469 700 aa12.44□□□□□ -0.42
CASC19-261ENST00000641853 NPDC1Q9NQX5 325 aaPredicted RBP12.44□□□□□ -0.42
CASC19-261ENST00000641853 NUTM2FA1L443 756 aa12.43□□□□□ -0.42
CASC19-261ENST00000641853 ARHGAP33O14559 1287 aa12.43□□□□□ -0.42
CASC19-261ENST00000641853 GPR37O15354 613 aa12.42□□□□□ -0.42
CASC19-261ENST00000641853 DMRTA1Q5VZB9 504 aa12.41□□□□□ -0.42
CASC19-261ENST00000641853 KRTAP3-3Q9BYR6 98 aa12.41□□□□□ -0.42
CASC19-261ENST00000641853 KRTAP3-2Q9BYR7 98 aa12.41□□□□□ -0.42
CASC19-261ENST00000641853 PBX2P40425 430 aa12.4□□□□□ -0.42
CASC19-261ENST00000641853 CDAN1Q8IWY9 1227 aa12.4□□□□□ -0.42
CASC19-261ENST00000641853 PTGDRQ13258 359 aa12.39□□□□□ -0.43
CASC19-261ENST00000641853 GPIHBP1Q8IV16 184 aa12.39□□□□□ -0.43
CASC19-261ENST00000641853 PPP1R3GB7ZBB8 358 aa12.38□□□□□ -0.43
CASC19-261ENST00000641853 ZBED2Q9BTP6 218 aa12.35□□□□□ -0.43
CASC19-261ENST00000641853 LSM11P83369 360 aaKnown RBP eCLIP12.34□□□□□ -0.43
CASC19-261ENST00000641853 ZC3H15Q8WU90 426 aaKnown RBP12.34□□□□□ -0.43
CASC19-261ENST00000641853 FCHSD2O94868 740 aa12.33□□□□□ -0.43
CASC19-261ENST00000641853 PROX2Q3B8N5 592 aa12.33□□□□□ -0.43
CASC19-261ENST00000641853 KCNH8Q96L42 1107 aa12.33□□□□□ -0.43
CASC19-261ENST00000641853 FECHP22830 423 aa12.32□□□□□ -0.44
CASC19-261ENST00000641853 CERKQ8TCT0 537 aa12.32□□□□□ -0.44
CASC19-261ENST00000641853 FAM198AQ9UFP1 575 aa12.32□□□□□ -0.44
CASC19-261ENST00000641853 CDCA7LQ96GN5 454 aa12.31□□□□□ -0.44
CASC19-261ENST00000641853 PRSS12P56730 875 aa12.3□□□□□ -0.44
CASC19-261ENST00000641853 HIC1Q14526 733 aa12.29□□□□□ -0.44
CASC19-261ENST00000641853 TSKSQ9UJT2 592 aa12.29□□□□□ -0.44
CASC19-261ENST00000641853 VPS9D1Q9Y2B5 631 aa12.29□□□□□ -0.44
CASC19-261ENST00000641853 PADI6Q6TGC4 694 aa12.29□□□□□ -0.44
CASC19-261ENST00000641853 ANKRD13DQ6ZTN6 518 aa12.29□□□□□ -0.44
CASC19-261ENST00000641853 TTC13Q8NBP0 860 aa12.29□□□□□ -0.44
CASC19-261ENST00000641853 SLC4A5Q9BY07 1137 aa12.29□□□□□ -0.44
CASC19-261ENST00000641853 GNPATO15228 680 aa12.28□□□□□ -0.44
CASC19-261ENST00000641853 TRIM6-TRIM34B2RNG4 842 aa12.27□□□□□ -0.44
CASC19-261ENST00000641853 C3orf80F5H4A9 247 aa12.26□□□□□ -0.45
CASC19-261ENST00000641853 ZMYND10O75800 440 aa12.26□□□□□ -0.45
CASC19-261ENST00000641853 ADGRD1Q6QNK2 874 aa12.26□□□□□ -0.45
CASC19-261ENST00000641853 RBM27Q9P2N5 1060 aaKnown RBP12.26□□□□□ -0.45
CASC19-261ENST00000641853 TK2O00142 265 aa12.26□□□□□ -0.45
CASC19-261ENST00000641853 KIAA1468Q9P260 1216 aa12.23□□□□□ -0.45
CASC19-261ENST00000641853 HRO43593 1189 aa12.22□□□□□ -0.45
CASC19-261ENST00000641853 FAM161AQ3B820 660 aa12.22□□□□□ -0.45
CASC19-261ENST00000641853 BARGINQ6ZT62 677 aa12.22□□□□□ -0.45
CASC19-261ENST00000641853 PCDH10Q9P2E7 1040 aa12.22□□□□□ -0.45
CASC19-261ENST00000641853 ONECUT3O60422 494 aaPredicted RBP12.22□□□□□ -0.45
CASC19-261ENST00000641853 TPRNQ4KMQ1 711 aa12.22□□□□□ -0.45
CASC19-261ENST00000641853 RABGEF1Q9UJ41 708 aa12.21□□□□□ -0.46
CASC19-261ENST00000641853 BHMG1C9JSJ3 638 aaPredicted RBP12.2□□□□□ -0.46
CASC19-261ENST00000641853 PRKCSHP14314 528 aaPredicted RBP12.19□□□□□ -0.46
CASC19-261ENST00000641853 ADGRG1Q9Y653 693 aa12.19□□□□□ -0.46
CASC19-261ENST00000641853 SMAPO00193 183 aa12.18□□□□□ -0.46
CASC19-261ENST00000641853 MAP2K5Q13163 448 aa12.18□□□□□ -0.46
CASC19-261ENST00000641853 PACS2Q86VP3 889 aa12.18□□□□□ -0.46
CASC19-261ENST00000641853 SEPT9Q9UHD8 586 aaPredicted RBP12.17□□□□□ -0.46
CASC19-261ENST00000641853 NUDT18Q6ZVK8 323 aa12.16□□□□□ -0.46
CASC19-261ENST00000641853 TATDN2Q93075 761 aa12.16□□□□□ -0.46
CASC19-261ENST00000641853 IRF6O14896 467 aa12.15□□□□□ -0.46
CASC19-261ENST00000641853 PNMA3Q9UL41 463 aa12.15□□□□□ -0.46
CASC19-261ENST00000641853 EYA1Q99502 592 aa12.15□□□□□ -0.47
CASC19-261ENST00000641853 MINK1Q8N4C8 1332 aaPredicted RBP12.14□□□□□ -0.47
CASC19-261ENST00000641853 NBPF26B4DH59 902 aa12.13□□□□□ -0.47
CASC19-261ENST00000641853 KRI1Q8N9T8 703 aaKnown RBP12.13□□□□□ -0.47
CASC19-261ENST00000641853 CCDC102AQ96A19 550 aa12.13□□□□□ -0.47
CASC19-261ENST00000641853 SLC24A3Q9HC58 644 aa12.13□□□□□ -0.47
CASC19-261ENST00000641853 PHOX2BQ99453 314 aa12.12□□□□□ -0.47
CASC19-261ENST00000641853 NBPF3Q9H094 633 aa12.11□□□□□ -0.47
CASC19-261ENST00000641853 METTL3Q86U44 580 aaKnown RBP12.11□□□□□ -0.47
CASC19-261ENST00000641853 PXYLP1Q8TE99 480 aa12.11□□□□□ -0.47
CASC19-261ENST00000641853 SPNS2Q8IVW8 549 aa12.1□□□□□ -0.47
CASC19-261ENST00000641853 MRPL50Q8N5N7 158 aaKnown RBP12.1□□□□□ -0.47
CASC19-261ENST00000641853 OATP04181 439 aa12.08□□□□□ -0.48
CASC19-261ENST00000641853 NLRP7Q8WX94 980 aa12.08□□□□□ -0.48
CASC19-261ENST00000641853 FAM98CQ17RN3 349 aaKnown RBP12.08□□□□□ -0.48
CASC19-261ENST00000641853 LAPTM4BQ86VI4 370 aa12.08□□□□□ -0.48
CASC19-261ENST00000641853 RBM46Q8TBY0 533 aaKnown RBP12.08□□□□□ -0.48
CASC19-261ENST00000641853 RCCD1A6NED2 376 aa12.05□□□□□ -0.48
CASC19-261ENST00000641853 ZFRQ96KR1 1074 aaKnown RBP12.05□□□□□ -0.48
CASC19-261ENST00000641853 AK7Q96M32 723 aa12.04□□□□□ -0.48
CASC19-261ENST00000641853 STAC3Q96MF2 364 aa12.04□□□□□ -0.48
CASC19-261ENST00000641853 TRIM66O15016 1216 aa12.03□□□□□ -0.48
CASC19-261ENST00000641853 DNAJB2P25686 324 aa12.01□□□□□ -0.49
CASC19-261ENST00000641853 MYT1LQ9UL68 1186 aa12.01□□□□□ -0.49
CASC19-261ENST00000641853 TMEM134Q9H6X4 195 aa12□□□□□ -0.49
CASC19-261ENST00000641853 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12□□□□□ -0.49
CASC19-261ENST00000641853 SAMD7Q7Z3H4 446 aa12□□□□□ -0.49
CASC19-261ENST00000641853 SWT1Q5T5J6 900 aaKnown RBP11.99□□□□□ -0.49
CASC19-261ENST00000641853 GOLGA8CPA6NN73 597 aa11.98□□□□□ -0.49
CASC19-261ENST00000641853 MDM2Q00987 491 aaPredicted RBP11.97□□□□□ -0.49
CASC19-261ENST00000641853 WNT2BQ93097 391 aa11.97□□□□□ -0.49
CASC19-261ENST00000641853 KCTD12Q96CX2 325 aaKnown RBP11.97□□□□□ -0.49
CASC19-261ENST00000641853 REPIN1Q9BWE0 567 aaKnown RBP11.97□□□□□ -0.49
CASC19-261ENST00000641853 AMHR2Q16671 573 aa11.97□□□□□ -0.49
CASC19-261ENST00000641853 BCAMP50895 628 aa11.96□□□□□ -0.5
CASC19-261ENST00000641853 MMRN1Q13201 1228 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms