RNA–Protein interactions for RNA: ENST00000641853.1

CASC19-261, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,638 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-261ENST00000641853 AXIN2Q9Y2T1 843 aa12.49□□□□□ -0.41
CASC19-261ENST00000641853 LMOD2Q6P5Q4 547 aa12.48□□□□□ -0.41
CASC19-261ENST00000641853 CDHR5Q9HBB8 845 aa12.48□□□□□ -0.41
CASC19-261ENST00000641853 PSEN2P49810 448 aa12.46□□□□□ -0.41
CASC19-261ENST00000641853 TULP1O00294 542 aaPredicted RBP12.45□□□□□ -0.42
CASC19-261ENST00000641853 KCNK17Q96T54 332 aa12.45□□□□□ -0.42
CASC19-261ENST00000641853 COL9A1P20849 921 aa12.44□□□□□ -0.42
CASC19-261ENST00000641853 PTPREP23469 700 aa12.44□□□□□ -0.42
CASC19-261ENST00000641853 NPDC1Q9NQX5 325 aaPredicted RBP12.44□□□□□ -0.42
CASC19-261ENST00000641853 NUTM2FA1L443 756 aa12.43□□□□□ -0.42
CASC19-261ENST00000641853 ARHGAP33O14559 1287 aa12.43□□□□□ -0.42
CASC19-261ENST00000641853 GPR37O15354 613 aa12.42□□□□□ -0.42
CASC19-261ENST00000641853 DMRTA1Q5VZB9 504 aa12.41□□□□□ -0.42
CASC19-261ENST00000641853 KRTAP3-3Q9BYR6 98 aa12.41□□□□□ -0.42
CASC19-261ENST00000641853 KRTAP3-2Q9BYR7 98 aa12.41□□□□□ -0.42
CASC19-261ENST00000641853 PBX2P40425 430 aa12.4□□□□□ -0.42
CASC19-261ENST00000641853 CDAN1Q8IWY9 1227 aa12.4□□□□□ -0.42
CASC19-261ENST00000641853 PTGDRQ13258 359 aa12.39□□□□□ -0.43
CASC19-261ENST00000641853 GPIHBP1Q8IV16 184 aa12.39□□□□□ -0.43
CASC19-261ENST00000641853 PPP1R3GB7ZBB8 358 aa12.38□□□□□ -0.43
CASC19-261ENST00000641853 ZBED2Q9BTP6 218 aa12.35□□□□□ -0.43
CASC19-261ENST00000641853 LSM11P83369 360 aaKnown RBP eCLIP12.34□□□□□ -0.43
CASC19-261ENST00000641853 ZC3H15Q8WU90 426 aaKnown RBP12.34□□□□□ -0.43
CASC19-261ENST00000641853 FCHSD2O94868 740 aa12.33□□□□□ -0.43
CASC19-261ENST00000641853 PROX2Q3B8N5 592 aa12.33□□□□□ -0.43
CASC19-261ENST00000641853 KCNH8Q96L42 1107 aa12.33□□□□□ -0.43
CASC19-261ENST00000641853 FECHP22830 423 aa12.32□□□□□ -0.44
CASC19-261ENST00000641853 CERKQ8TCT0 537 aa12.32□□□□□ -0.44
CASC19-261ENST00000641853 FAM198AQ9UFP1 575 aa12.32□□□□□ -0.44
CASC19-261ENST00000641853 CDCA7LQ96GN5 454 aa12.31□□□□□ -0.44
CASC19-261ENST00000641853 PRSS12P56730 875 aa12.3□□□□□ -0.44
CASC19-261ENST00000641853 HIC1Q14526 733 aa12.29□□□□□ -0.44
CASC19-261ENST00000641853 TSKSQ9UJT2 592 aa12.29□□□□□ -0.44
CASC19-261ENST00000641853 VPS9D1Q9Y2B5 631 aa12.29□□□□□ -0.44
CASC19-261ENST00000641853 PADI6Q6TGC4 694 aa12.29□□□□□ -0.44
CASC19-261ENST00000641853 ANKRD13DQ6ZTN6 518 aa12.29□□□□□ -0.44
CASC19-261ENST00000641853 TTC13Q8NBP0 860 aa12.29□□□□□ -0.44
CASC19-261ENST00000641853 SLC4A5Q9BY07 1137 aa12.29□□□□□ -0.44
CASC19-261ENST00000641853 GNPATO15228 680 aa12.28□□□□□ -0.44
CASC19-261ENST00000641853 TRIM6-TRIM34B2RNG4 842 aa12.27□□□□□ -0.44
CASC19-261ENST00000641853 C3orf80F5H4A9 247 aa12.26□□□□□ -0.45
CASC19-261ENST00000641853 ZMYND10O75800 440 aa12.26□□□□□ -0.45
CASC19-261ENST00000641853 ADGRD1Q6QNK2 874 aa12.26□□□□□ -0.45
CASC19-261ENST00000641853 RBM27Q9P2N5 1060 aaKnown RBP12.26□□□□□ -0.45
CASC19-261ENST00000641853 TK2O00142 265 aa12.26□□□□□ -0.45
CASC19-261ENST00000641853 KIAA1468Q9P260 1216 aa12.23□□□□□ -0.45
CASC19-261ENST00000641853 HRO43593 1189 aa12.22□□□□□ -0.45
CASC19-261ENST00000641853 FAM161AQ3B820 660 aa12.22□□□□□ -0.45
CASC19-261ENST00000641853 BARGINQ6ZT62 677 aa12.22□□□□□ -0.45
CASC19-261ENST00000641853 PCDH10Q9P2E7 1040 aa12.22□□□□□ -0.45
CASC19-261ENST00000641853 ONECUT3O60422 494 aaPredicted RBP12.22□□□□□ -0.45
CASC19-261ENST00000641853 TPRNQ4KMQ1 711 aa12.22□□□□□ -0.45
CASC19-261ENST00000641853 RABGEF1Q9UJ41 708 aa12.21□□□□□ -0.46
CASC19-261ENST00000641853 BHMG1C9JSJ3 638 aaPredicted RBP12.2□□□□□ -0.46
CASC19-261ENST00000641853 PRKCSHP14314 528 aaPredicted RBP12.19□□□□□ -0.46
CASC19-261ENST00000641853 ADGRG1Q9Y653 693 aa12.19□□□□□ -0.46
CASC19-261ENST00000641853 SMAPO00193 183 aa12.18□□□□□ -0.46
CASC19-261ENST00000641853 MAP2K5Q13163 448 aa12.18□□□□□ -0.46
CASC19-261ENST00000641853 PACS2Q86VP3 889 aa12.18□□□□□ -0.46
CASC19-261ENST00000641853 SEPT9Q9UHD8 586 aaPredicted RBP12.17□□□□□ -0.46
CASC19-261ENST00000641853 NUDT18Q6ZVK8 323 aa12.16□□□□□ -0.46
CASC19-261ENST00000641853 TATDN2Q93075 761 aa12.16□□□□□ -0.46
CASC19-261ENST00000641853 IRF6O14896 467 aa12.15□□□□□ -0.46
CASC19-261ENST00000641853 PNMA3Q9UL41 463 aa12.15□□□□□ -0.46
CASC19-261ENST00000641853 EYA1Q99502 592 aa12.15□□□□□ -0.47
CASC19-261ENST00000641853 MINK1Q8N4C8 1332 aaPredicted RBP12.14□□□□□ -0.47
CASC19-261ENST00000641853 NBPF26B4DH59 902 aa12.13□□□□□ -0.47
CASC19-261ENST00000641853 KRI1Q8N9T8 703 aaKnown RBP12.13□□□□□ -0.47
CASC19-261ENST00000641853 CCDC102AQ96A19 550 aa12.13□□□□□ -0.47
CASC19-261ENST00000641853 SLC24A3Q9HC58 644 aa12.13□□□□□ -0.47
CASC19-261ENST00000641853 PHOX2BQ99453 314 aa12.12□□□□□ -0.47
CASC19-261ENST00000641853 NBPF3Q9H094 633 aa12.11□□□□□ -0.47
CASC19-261ENST00000641853 METTL3Q86U44 580 aaKnown RBP12.11□□□□□ -0.47
CASC19-261ENST00000641853 PXYLP1Q8TE99 480 aa12.11□□□□□ -0.47
CASC19-261ENST00000641853 SPNS2Q8IVW8 549 aa12.1□□□□□ -0.47
CASC19-261ENST00000641853 MRPL50Q8N5N7 158 aaKnown RBP12.1□□□□□ -0.47
CASC19-261ENST00000641853 OATP04181 439 aa12.08□□□□□ -0.48
CASC19-261ENST00000641853 NLRP7Q8WX94 980 aa12.08□□□□□ -0.48
CASC19-261ENST00000641853 FAM98CQ17RN3 349 aaKnown RBP12.08□□□□□ -0.48
CASC19-261ENST00000641853 LAPTM4BQ86VI4 370 aa12.08□□□□□ -0.48
CASC19-261ENST00000641853 RBM46Q8TBY0 533 aaKnown RBP12.08□□□□□ -0.48
CASC19-261ENST00000641853 RCCD1A6NED2 376 aa12.05□□□□□ -0.48
CASC19-261ENST00000641853 ZFRQ96KR1 1074 aaKnown RBP12.05□□□□□ -0.48
CASC19-261ENST00000641853 AK7Q96M32 723 aa12.04□□□□□ -0.48
CASC19-261ENST00000641853 STAC3Q96MF2 364 aa12.04□□□□□ -0.48
CASC19-261ENST00000641853 TRIM66O15016 1216 aa12.03□□□□□ -0.48
CASC19-261ENST00000641853 DNAJB2P25686 324 aa12.01□□□□□ -0.49
CASC19-261ENST00000641853 MYT1LQ9UL68 1186 aa12.01□□□□□ -0.49
CASC19-261ENST00000641853 TMEM134Q9H6X4 195 aa12□□□□□ -0.49
CASC19-261ENST00000641853 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12□□□□□ -0.49
CASC19-261ENST00000641853 SAMD7Q7Z3H4 446 aa12□□□□□ -0.49
CASC19-261ENST00000641853 SWT1Q5T5J6 900 aaKnown RBP11.99□□□□□ -0.49
CASC19-261ENST00000641853 GOLGA8CPA6NN73 597 aa11.98□□□□□ -0.49
CASC19-261ENST00000641853 MDM2Q00987 491 aaPredicted RBP11.97□□□□□ -0.49
CASC19-261ENST00000641853 WNT2BQ93097 391 aa11.97□□□□□ -0.49
CASC19-261ENST00000641853 KCTD12Q96CX2 325 aaKnown RBP11.97□□□□□ -0.49
CASC19-261ENST00000641853 REPIN1Q9BWE0 567 aaKnown RBP11.97□□□□□ -0.49
CASC19-261ENST00000641853 AMHR2Q16671 573 aa11.97□□□□□ -0.49
CASC19-261ENST00000641853 BCAMP50895 628 aa11.96□□□□□ -0.5
CASC19-261ENST00000641853 MMRN1Q13201 1228 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms