RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 FAM135AQ9P2D6 1515 aa12.74□□□□□ -0.37
PHGDH-219ENST00000641513 PKD2Q13563 968 aa12.74□□□□□ -0.37
PHGDH-219ENST00000641513 ZNF316A6NFI3 1004 aaPredicted RBP12.73□□□□□ -0.37
PHGDH-219ENST00000641513 TIMELESSQ9UNS1 1208 aa12.73□□□□□ -0.37
PHGDH-219ENST00000641513 TEX14Q8IWB6 1497 aa12.72□□□□□ -0.37
PHGDH-219ENST00000641513 ABCA6Q8N139 1617 aa12.72□□□□□ -0.37
PHGDH-219ENST00000641513 ANKRD30BQ9BXX2 1392 aa12.71□□□□□ -0.37
PHGDH-219ENST00000641513 DEPDC5O75140 1603 aa12.71□□□□□ -0.37
PHGDH-219ENST00000641513 ILDR1Q86SU0 546 aaPredicted RBP12.71□□□□□ -0.37
PHGDH-219ENST00000641513 RAPGEF3O95398 923 aa12.7□□□□□ -0.38
PHGDH-219ENST00000641513 DIEXFQ68CQ4 756 aaKnown RBP12.7□□□□□ -0.38
PHGDH-219ENST00000641513 CEP152O94986 1710 aa12.69□□□□□ -0.38
PHGDH-219ENST00000641513 CFAP65Q6ZU64 1925 aaKnown RBP12.69□□□□□ -0.38
PHGDH-219ENST00000641513 MLH3Q9UHC1 1453 aa12.69□□□□□ -0.38
PHGDH-219ENST00000641513 A2MP01023 1474 aa12.68□□□□□ -0.38
PHGDH-219ENST00000641513 MAGI2Q86UL8 1455 aa12.68□□□□□ -0.38
PHGDH-219ENST00000641513 KIF3BO15066 747 aa12.68□□□□□ -0.38
PHGDH-219ENST00000641513 KANK1Q14678 1352 aa12.68□□□□□ -0.38
PHGDH-219ENST00000641513 DHX29Q7Z478 1369 aaKnown RBP12.68□□□□□ -0.38
PHGDH-219ENST00000641513 E9PCH4 1651 aa12.67□□□□□ -0.38
PHGDH-219ENST00000641513 TET3O43151 1660 aa12.67□□□□□ -0.38
PHGDH-219ENST00000641513 RPRD2Q5VT52 1461 aaKnown RBP12.67□□□□□ -0.38
PHGDH-219ENST00000641513 FRMPD1Q5SYB0 1578 aa12.67□□□□□ -0.38
PHGDH-219ENST00000641513 SPHKAPQ2M3C7 1700 aa12.66□□□□□ -0.38
PHGDH-219ENST00000641513 DIP2CQ9Y2E4 1556 aa12.66□□□□□ -0.38
PHGDH-219ENST00000641513 PPP1R15AO75807 674 aaPredicted RBP12.66□□□□□ -0.38
PHGDH-219ENST00000641513 RNF17Q9BXT8 1623 aaKnown RBP12.65□□□□□ -0.38
PHGDH-219ENST00000641513 PRDM15P57071 1507 aaPredicted RBP12.63□□□□□ -0.39
PHGDH-219ENST00000641513 MROH1Q8NDA8 1641 aa12.63□□□□□ -0.39
PHGDH-219ENST00000641513 BCORL1Q5H9F3 1711 aa12.63□□□□□ -0.39
PHGDH-219ENST00000641513 ZMYM4Q5VZL5 1548 aa12.62□□□□□ -0.39
PHGDH-219ENST00000641513 L3MBTL2Q969R5 705 aa12.62□□□□□ -0.39
PHGDH-219ENST00000641513 MSH5O43196 834 aa12.61□□□□□ -0.39
PHGDH-219ENST00000641513 TRHP20396 242 aaPredicted RBP12.61□□□□□ -0.39
PHGDH-219ENST00000641513 VWDEQ8N2E2 1590 aa12.6□□□□□ -0.39
PHGDH-219ENST00000641513 CCDC144AA2RUR9 1427 aa12.6□□□□□ -0.39
PHGDH-219ENST00000641513 YEATS2Q9ULM3 1422 aa12.6□□□□□ -0.39
PHGDH-219ENST00000641513 KIF1BO60333 1816 aa12.6□□□□□ -0.39
PHGDH-219ENST00000641513 GGT6Q6P531 493 aa12.59□□□□□ -0.39
PHGDH-219ENST00000641513 CENPBP07199 599 aaPredicted RBP12.58□□□□□ -0.4
PHGDH-219ENST00000641513 CAMSAP1Q5T5Y3 1602 aa12.58□□□□□ -0.4
PHGDH-219ENST00000641513 ZNF326Q5BKZ1 582 aaKnown RBP12.57□□□□□ -0.4
PHGDH-219ENST00000641513 ZC3H13Q5T200 1668 aaKnown RBP12.57□□□□□ -0.4
PHGDH-219ENST00000641513 EFCAB6Q5THR3 1501 aa12.57□□□□□ -0.4
PHGDH-219ENST00000641513 ATP10AO60312 1499 aa12.56□□□□□ -0.4
PHGDH-219ENST00000641513 CLTCL1P53675 1640 aa12.55□□□□□ -0.4
PHGDH-219ENST00000641513 PLA2R1Q13018 1463 aa12.55□□□□□ -0.4
PHGDH-219ENST00000641513 TRPM2O94759 1503 aa12.55□□□□□ -0.4
PHGDH-219ENST00000641513 ARHGEF40Q8TER5 1519 aa12.54□□□□□ -0.4
PHGDH-219ENST00000641513 KDM2AQ9Y2K7 1162 aa12.54□□□□□ -0.4
PHGDH-219ENST00000641513 WASHC2CQ9Y4E1 1318 aa12.54□□□□□ -0.4
PHGDH-219ENST00000641513 ABCC3O15438 1527 aa12.53□□□□□ -0.4
PHGDH-219ENST00000641513 LMTK2Q8IWU2 1503 aa12.53□□□□□ -0.4
PHGDH-219ENST00000641513 RGL3Q3MIN7 710 aa12.53□□□□□ -0.4
PHGDH-219ENST00000641513 HIRIP3Q9BW71 556 aaPredicted RBP12.53□□□□□ -0.4
PHGDH-219ENST00000641513 COL17A1Q9UMD9 1497 aaPredicted RBP12.53□□□□□ -0.4
PHGDH-219ENST00000641513 REREQ9P2R6 1566 aa12.52□□□□□ -0.4
PHGDH-219ENST00000641513 NBPF8Q3BBV2 869 aa12.52□□□□□ -0.41
PHGDH-219ENST00000641513 CLTCQ00610 1675 aaKnown RBP12.51□□□□□ -0.41
PHGDH-219ENST00000641513 SIGLEC1Q9BZZ2 1709 aa12.51□□□□□ -0.41
PHGDH-219ENST00000641513 DCAF11Q8TEB1 546 aa12.51□□□□□ -0.41
PHGDH-219ENST00000641513 MROH2AA6NES4 1674 aa12.49□□□□□ -0.41
PHGDH-219ENST00000641513 PTPRTO14522 1441 aa12.49□□□□□ -0.41
PHGDH-219ENST00000641513 PREX1Q8TCU6 1659 aa12.48□□□□□ -0.41
PHGDH-219ENST00000641513 TRPM1Q7Z4N2 1603 aa12.48□□□□□ -0.41
PHGDH-219ENST00000641513 UGGT1Q9NYU2 1555 aa12.48□□□□□ -0.41
PHGDH-219ENST00000641513 POLR1AO95602 1720 aaPredicted RBP12.48□□□□□ -0.41
PHGDH-219ENST00000641513 AGLP35573 1532 aa12.47□□□□□ -0.41
PHGDH-219ENST00000641513 SCAF1Q9H7N4 1312 aaKnown RBP12.47□□□□□ -0.41
PHGDH-219ENST00000641513 MYO5BQ9ULV0 1848 aa12.47□□□□□ -0.41
PHGDH-219ENST00000641513 EIF4G2P78344 907 aaKnown RBP eCLIP12.47□□□□□ -0.417e-14■■■■■ 63.8
PHGDH-219ENST00000641513 MLECQ14165 292 aa12.47□□□□□ -0.41
PHGDH-219ENST00000641513 NPATQ14207 1427 aa12.46□□□□□ -0.41
PHGDH-219ENST00000641513 UHRF1BP1Q6BDS2 1440 aa12.46□□□□□ -0.41
PHGDH-219ENST00000641513 HSPA5P11021 654 aaKnown RBP12.46□□□□□ -0.41
PHGDH-219ENST00000641513 IFT172Q9UG01 1749 aa12.45□□□□□ -0.42
PHGDH-219ENST00000641513 ARID4BQ4LE39 1312 aaPredicted RBP12.45□□□□□ -0.42
PHGDH-219ENST00000641513 CHGAP10645 457 aaKnown RBP12.45□□□□□ -0.42
PHGDH-219ENST00000641513 RALGAPBQ86X10 1494 aa12.45□□□□□ -0.42
PHGDH-219ENST00000641513 SPATA31E1Q6ZUB1 1445 aa12.44□□□□□ -0.42
PHGDH-219ENST00000641513 ESF1Q9H501 851 aaKnown RBP12.43□□□□□ -0.42
PHGDH-219ENST00000641513 MADDQ8WXG6 1647 aa12.43□□□□□ -0.42
PHGDH-219ENST00000641513 PRAG1Q86YV5 1406 aa12.43□□□□□ -0.42
PHGDH-219ENST00000641513 CNTLNQ9NXG0 1405 aa12.43□□□□□ -0.42
PHGDH-219ENST00000641513 PPLO60437 1756 aa12.43□□□□□ -0.42
PHGDH-219ENST00000641513 SYNMO15061 1565 aa12.43□□□□□ -0.42
PHGDH-219ENST00000641513 NEURL4Q96JN8 1562 aa12.42□□□□□ -0.42
PHGDH-219ENST00000641513 PIK3C2BO00750 1634 aa12.41□□□□□ -0.42
PHGDH-219ENST00000641513 ARHGAP31Q2M1Z3 1444 aa12.41□□□□□ -0.42
PHGDH-219ENST00000641513 PELP1Q8IZL8 1130 aaKnown RBP12.41□□□□□ -0.42
PHGDH-219ENST00000641513 CARD11Q9BXL7 1154 aa12.41□□□□□ -0.42
PHGDH-219ENST00000641513 ROCK2O75116 1388 aaKnown RBP12.41□□□□□ -0.42
PHGDH-219ENST00000641513 DDX10Q13206 875 aaKnown RBP12.4□□□□□ -0.42
PHGDH-219ENST00000641513 PPP6R1Q9UPN7 881 aa12.4□□□□□ -0.42
PHGDH-219ENST00000641513 USP47Q96K76 1375 aa12.4□□□□□ -0.42
PHGDH-219ENST00000641513 NOS1P29475 1434 aa12.39□□□□□ -0.43
PHGDH-219ENST00000641513 FER1L4A9Z1Z3 1794 aa12.39□□□□□ -0.43
PHGDH-219ENST00000641513 ADGRB3O60242 1522 aa12.39□□□□□ -0.43
PHGDH-219ENST00000641513 LAMC1P11047 1609 aa12.39□□□□□ -0.43
PHGDH-219ENST00000641513 KIAA1210Q9ULL0 1709 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms