RNA–Protein interactions for RNA: ENST00000641411.1

CASC19-227, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,285 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-227ENST00000641411 PCDHGA10Q9Y5H3 936 aa12.96□□□□□ -0.33
CASC19-227ENST00000641411 CAMK2BQ13554 666 aa12.95□□□□□ -0.34
CASC19-227ENST00000641411 PPP1R3GB7ZBB8 358 aa12.94□□□□□ -0.34
CASC19-227ENST00000641411 IFFO2Q5TF58 517 aa12.94□□□□□ -0.34
CASC19-227ENST00000641411 CECR2Q9BXF3 1484 aa12.93□□□□□ -0.34
CASC19-227ENST00000641411 MROH2BQ7Z745 1585 aa12.92□□□□□ -0.34
CASC19-227ENST00000641411 MRPL50Q8N5N7 158 aaKnown RBP12.92□□□□□ -0.34
CASC19-227ENST00000641411 BICRAQ9NZM4 1560 aa12.91□□□□□ -0.34
CASC19-227ENST00000641411 PHF14O94880 888 aa12.91□□□□□ -0.34
CASC19-227ENST00000641411 NBPF3Q9H094 633 aa12.91□□□□□ -0.34
CASC19-227ENST00000641411 PTPN5P54829 565 aa12.9□□□□□ -0.34
CASC19-227ENST00000641411 FBXW7Q969H0 707 aa12.9□□□□□ -0.34
CASC19-227ENST00000641411 WNT2BQ93097 391 aa12.89□□□□□ -0.35
CASC19-227ENST00000641411 TYW1BQ6NUM6 668 aa12.88□□□□□ -0.35
CASC19-227ENST00000641411 RABGEF1Q9UJ41 708 aa12.88□□□□□ -0.35
CASC19-227ENST00000641411 COL9A1P20849 921 aa12.87□□□□□ -0.35
CASC19-227ENST00000641411 SMARCA4P51532 1647 aa12.87□□□□□ -0.35
CASC19-227ENST00000641411 GOLGA8CPA6NN73 597 aa12.85□□□□□ -0.35
CASC19-227ENST00000641411 PROX2Q3B8N5 592 aa12.84□□□□□ -0.35
CASC19-227ENST00000641411 EPAS1Q99814 870 aa12.82□□□□□ -0.36
CASC19-227ENST00000641411 WIZO95785 1651 aa12.81□□□□□ -0.36
CASC19-227ENST00000641411 DPYSL4O14531 572 aa12.8□□□□□ -0.36
CASC19-227ENST00000641411 ONECUT3O60422 494 aaPredicted RBP12.8□□□□□ -0.36
CASC19-227ENST00000641411 RGS20O76081 388 aa12.8□□□□□ -0.36
CASC19-227ENST00000641411 LAPTM4BQ86VI4 370 aa12.8□□□□□ -0.36
CASC19-227ENST00000641411 BBXQ8WY36 941 aaPredicted RBP12.8□□□□□ -0.36
CASC19-227ENST00000641411 TOP2AP11388 1531 aaKnown RBP12.78□□□□□ -0.36
CASC19-227ENST00000641411 PEG3Q9GZU2 1588 aa12.77□□□□□ -0.36
CASC19-227ENST00000641411 C6orf132Q5T0Z8 1188 aa12.77□□□□□ -0.37
CASC19-227ENST00000641411 A0A0G2JS52 829 aa12.76□□□□□ -0.37
CASC19-227ENST00000641411 ANKK1Q8NFD2 765 aa12.76□□□□□ -0.37
CASC19-227ENST00000641411 KIAA1468Q9P260 1216 aa12.74□□□□□ -0.37
CASC19-227ENST00000641411 ITGBL1O95965 494 aaPredicted RBP12.73□□□□□ -0.37
CASC19-227ENST00000641411 SOWAHBA6NEL2 793 aa12.72□□□□□ -0.37
CASC19-227ENST00000641411 PDIA6Q15084 440 aa12.72□□□□□ -0.37
CASC19-227ENST00000641411 TRIM6-TRIM34B2RNG4 842 aa12.71□□□□□ -0.37
CASC19-227ENST00000641411 ZFRQ96KR1 1074 aaKnown RBP12.71□□□□□ -0.37
CASC19-227ENST00000641411 BCAMP50895 628 aa12.7□□□□□ -0.38
CASC19-227ENST00000641411 NYAP1Q6ZVC0 841 aa12.69□□□□□ -0.38
CASC19-227ENST00000641411 DDX12PQ92771 950 aa12.68□□□□□ -0.38
CASC19-227ENST00000641411 EN1Q05925 392 aaPredicted RBP12.67□□□□□ -0.38
CASC19-227ENST00000641411 EIF4G1Q04637 1599 aaKnown RBP12.66□□□□□ -0.38
CASC19-227ENST00000641411 FAM98CQ17RN3 349 aaKnown RBP12.66□□□□□ -0.38
CASC19-227ENST00000641411 ARIH1Q9Y4X5 557 aaPredicted RBP12.66□□□□□ -0.38
CASC19-227ENST00000641411 SPDYE16A6NNV3 312 aaPredicted RBP12.65□□□□□ -0.38
CASC19-227ENST00000641411 RBM33Q96EV2 1170 aaKnown RBP12.65□□□□□ -0.38
CASC19-227ENST00000641411 SEPT9Q9UHD8 586 aaPredicted RBP12.65□□□□□ -0.38
CASC19-227ENST00000641411 SMARCA2P51531 1590 aa12.64□□□□□ -0.39
CASC19-227ENST00000641411 SPRYD3Q8NCJ5 442 aa12.63□□□□□ -0.39
CASC19-227ENST00000641411 WBP1LQ9NX94 342 aa12.63□□□□□ -0.39
CASC19-227ENST00000641411 NBR1Q14596 966 aa12.62□□□□□ -0.39
CASC19-227ENST00000641411 TSKSQ9UJT2 592 aa12.62□□□□□ -0.39
CASC19-227ENST00000641411 TSR1Q2NL82 804 aaKnown RBP12.61□□□□□ -0.39
CASC19-227ENST00000641411 MAP3K7O43318 606 aa12.58□□□□□ -0.4
CASC19-227ENST00000641411 E2F4Q16254 413 aa12.58□□□□□ -0.4
CASC19-227ENST00000641411 ATAD2BQ9ULI0 1458 aa12.58□□□□□ -0.4
CASC19-227ENST00000641411 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.57□□□□□ -0.4
CASC19-227ENST00000641411 TSR3Q9UJK0 312 aaKnown RBP12.57□□□□□ -0.4
CASC19-227ENST00000641411 CCDC88BA6NC98 1476 aa12.57□□□□□ -0.4
CASC19-227ENST00000641411 PRIM1P49642 420 aaKnown RBP12.56□□□□□ -0.4
CASC19-227ENST00000641411 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.56□□□□□ -0.4
CASC19-227ENST00000641411 PACS2Q86VP3 889 aa12.55□□□□□ -0.4
CASC19-227ENST00000641411 LRCH3Q96II8 777 aa12.55□□□□□ -0.4
CASC19-227ENST00000641411 IRX2Q9BZI1 471 aaPredicted RBP12.54□□□□□ -0.4
CASC19-227ENST00000641411 KCNC4Q03721 635 aa12.53□□□□□ -0.4
CASC19-227ENST00000641411 AMER1Q5JTC6 1135 aaPredicted RBP12.53□□□□□ -0.4
CASC19-227ENST00000641411 CERKQ8TCT0 537 aa12.53□□□□□ -0.4
CASC19-227ENST00000641411 FAM198AQ9UFP1 575 aa12.53□□□□□ -0.4
CASC19-227ENST00000641411 HPS5Q9UPZ3 1129 aa12.53□□□□□ -0.4
CASC19-227ENST00000641411 HMGXB3Q12766 1538 aa12.52□□□□□ -0.4
CASC19-227ENST00000641411 PRSS12P56730 875 aa12.52□□□□□ -0.41
CASC19-227ENST00000641411 CDCA7LQ96GN5 454 aa12.52□□□□□ -0.41
CASC19-227ENST00000641411 BAZ1BQ9UIG0 1483 aaKnown RBP12.51□□□□□ -0.41
CASC19-227ENST00000641411 OSBPP22059 807 aa12.48□□□□□ -0.41
CASC19-227ENST00000641411 NCAPD3P42695 1498 aa12.47□□□□□ -0.41
CASC19-227ENST00000641411 C3orf80F5H4A9 247 aa12.47□□□□□ -0.41
CASC19-227ENST00000641411 RBM27Q9P2N5 1060 aaKnown RBP12.47□□□□□ -0.41
CASC19-227ENST00000641411 PAXIP1Q6ZW49 1069 aaPredicted RBP12.45□□□□□ -0.42
CASC19-227ENST00000641411 GRXCR2A6NFK2 248 aa12.44□□□□□ -0.42
CASC19-227ENST00000641411 SMAPO00193 183 aa12.44□□□□□ -0.42
CASC19-227ENST00000641411 SAMD7Q7Z3H4 446 aa12.44□□□□□ -0.42
CASC19-227ENST00000641411 WDR70Q9NW82 654 aa12.44□□□□□ -0.42
CASC19-227ENST00000641411 NBPF26B4DH59 902 aa12.43□□□□□ -0.42
CASC19-227ENST00000641411 TATDN2Q93075 761 aa12.43□□□□□ -0.42
CASC19-227ENST00000641411 CDHR5Q9HBB8 845 aa12.43□□□□□ -0.42
CASC19-227ENST00000641411 RTN4Q9NQC3 1192 aaKnown RBP12.43□□□□□ -0.42
CASC19-227ENST00000641411 PPP4CP60510 307 aa12.42□□□□□ -0.42
CASC19-227ENST00000641411 CFAP44Q96MT7 982 aa12.42□□□□□ -0.42
CASC19-227ENST00000641411 TJAP1Q5JTD0 557 aa12.41□□□□□ -0.42
CASC19-227ENST00000641411 TTC13Q8NBP0 860 aa12.41□□□□□ -0.42
CASC19-227ENST00000641411 PNMA3Q9UL41 463 aa12.39□□□□□ -0.43
CASC19-227ENST00000641411 NPDC1Q9NQX5 325 aaPredicted RBP12.38□□□□□ -0.43
CASC19-227ENST00000641411 NUDT18Q6ZVK8 323 aa12.35□□□□□ -0.43
CASC19-227ENST00000641411 MTRQ99707 1265 aa12.34□□□□□ -0.43
CASC19-227ENST00000641411 ABCC8Q09428 1581 aa12.32□□□□□ -0.44
CASC19-227ENST00000641411 EEA1Q15075 1411 aa12.32□□□□□ -0.44
CASC19-227ENST00000641411 IL21Q9HBE4 155 aa12.32□□□□□ -0.44
CASC19-227ENST00000641411 APLP1P51693 650 aa12.3□□□□□ -0.44
CASC19-227ENST00000641411 PADI6Q6TGC4 694 aa12.3□□□□□ -0.44
CASC19-227ENST00000641411 WRNQ14191 1432 aaPredicted RBP eCLIP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms