RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 WDR7Q9Y4E6 1490 aa23.65■■□□□ 1.38
PHGDH-211ENST00000641213 DCAF11Q8TEB1 546 aa23.64■■□□□ 1.38
PHGDH-211ENST00000641213 KDM2AQ9Y2K7 1162 aa23.64■■□□□ 1.38
PHGDH-211ENST00000641213 TRPM1Q7Z4N2 1603 aa23.62■■□□□ 1.37
PHGDH-211ENST00000641213 ABCA9Q8IUA7 1624 aa23.62■■□□□ 1.37
PHGDH-211ENST00000641213 CARD11Q9BXL7 1154 aa23.61■■□□□ 1.37
PHGDH-211ENST00000641213 ARID4BQ4LE39 1312 aaPredicted RBP23.6■■□□□ 1.37
PHGDH-211ENST00000641213 ZFYVE16Q7Z3T8 1539 aa23.59■■□□□ 1.37
PHGDH-211ENST00000641213 RTEL1-TNFRSF6BF6WH68 1400 aa23.59■■□□□ 1.37
PHGDH-211ENST00000641213 CCDC184Q52MB2 194 aa23.58■■□□□ 1.37
PHGDH-211ENST00000641213 ATP10AO60312 1499 aa23.58■■□□□ 1.36
PHGDH-211ENST00000641213 PRAG1Q86YV5 1406 aa23.56■■□□□ 1.36
PHGDH-211ENST00000641213 SPAG9O60271 1321 aaKnown RBP23.56■■□□□ 1.36
PHGDH-211ENST00000641213 DHX29Q7Z478 1369 aaKnown RBP23.55■■□□□ 1.36
PHGDH-211ENST00000641213 HNRNPUQ00839 825 aaKnown RBP eCLIP23.55■■□□□ 1.36
PHGDH-211ENST00000641213 A2MP01023 1474 aa23.55■■□□□ 1.36
PHGDH-211ENST00000641213 FANCAO15360 1455 aa23.54■■□□□ 1.36
PHGDH-211ENST00000641213 AFAP1Q8N556 730 aa23.54■■□□□ 1.36
PHGDH-211ENST00000641213 E9PCH4 1651 aa23.54■■□□□ 1.36
PHGDH-211ENST00000641213 ROCK2O75116 1388 aaKnown RBP23.53■■□□□ 1.36
PHGDH-211ENST00000641213 INO80Q9ULG1 1556 aaPredicted RBP23.53■■□□□ 1.36
PHGDH-211ENST00000641213 DEPDC5O75140 1603 aa23.53■■□□□ 1.36
PHGDH-211ENST00000641213 RGL3Q3MIN7 710 aa23.51■■□□□ 1.35
PHGDH-211ENST00000641213 POLR3GLQ9BT43 218 aa23.51■■□□□ 1.35
PHGDH-211ENST00000641213 ST20-MTHFSA0A0A6YYL1 179 aa23.5■■□□□ 1.35
PHGDH-211ENST00000641213 ATP7AQ04656 1500 aa23.5■■□□□ 1.35
PHGDH-211ENST00000641213 LAMC1P11047 1609 aa23.5■■□□□ 1.35
PHGDH-211ENST00000641213 ASXL2Q76L83 1435 aa23.5■■□□□ 1.35
PHGDH-211ENST00000641213 MRS2Q9HD23 443 aa23.5■■□□□ 1.35
PHGDH-211ENST00000641213 FKBP8Q14318 412 aa23.49■■□□□ 1.35
PHGDH-211ENST00000641213 EIF2AK4Q9P2K8 1649 aaKnown RBP23.47■■□□□ 1.35
PHGDH-211ENST00000641213 SPHKAPQ2M3C7 1700 aa23.46■■□□□ 1.35
PHGDH-211ENST00000641213 ADGRL1O94910 1474 aa23.46■■□□□ 1.35
PHGDH-211ENST00000641213 GPRASP1Q5JY77 1395 aa23.45■■□□□ 1.34
PHGDH-211ENST00000641213 CEP152O94986 1710 aa23.44■■□□□ 1.34
PHGDH-211ENST00000641213 TET3O43151 1660 aa23.44■■□□□ 1.34
PHGDH-211ENST00000641213 FAM9BQ8IZU0 186 aa23.44■■□□□ 1.34
PHGDH-211ENST00000641213 PRDM15P57071 1507 aaPredicted RBP23.43■■□□□ 1.34
PHGDH-211ENST00000641213 OSCARQ8IYS5 282 aa23.43■■□□□ 1.34
PHGDH-211ENST00000641213 SCAPERQ9BY12 1400 aa23.43■■□□□ 1.34
PHGDH-211ENST00000641213 NEFLP07196 543 aa23.42■■□□□ 1.34
PHGDH-211ENST00000641213 NBPF1Q3BBV0 1214 aa23.42■■□□□ 1.34
PHGDH-211ENST00000641213 TRPM2O94759 1503 aa23.42■■□□□ 1.34
PHGDH-211ENST00000641213 VWDEQ8N2E2 1590 aa23.41■■□□□ 1.34
PHGDH-211ENST00000641213 RNF17Q9BXT8 1623 aaKnown RBP23.39■■□□□ 1.34
PHGDH-211ENST00000641213 KIDINS220Q9ULH0 1771 aa23.38■■□□□ 1.33
PHGDH-211ENST00000641213 BCANQ96GW7 911 aa23.38■■□□□ 1.33
PHGDH-211ENST00000641213 CLTCL1P53675 1640 aa23.37■■□□□ 1.33
PHGDH-211ENST00000641213 PTPRTO14522 1441 aa23.37■■□□□ 1.33
PHGDH-211ENST00000641213 MROH1Q8NDA8 1641 aa23.36■■□□□ 1.33
PHGDH-211ENST00000641213 MADDQ8WXG6 1647 aa23.35■■□□□ 1.33
PHGDH-211ENST00000641213 KANK1Q14678 1352 aa23.34■■□□□ 1.33
PHGDH-211ENST00000641213 CNGB1Q14028 1251 aaPredicted RBP23.34■■□□□ 1.33
PHGDH-211ENST00000641213 ZBED9Q6R2W3 1325 aa23.33■■□□□ 1.33
PHGDH-211ENST00000641213 NPM1P06748 294 aaKnown RBP eCLIP23.33■■□□□ 1.33
PHGDH-211ENST00000641213 MYT1LQ9UL68 1186 aa23.32■■□□□ 1.32
PHGDH-211ENST00000641213 CFAP74Q9C0B2 1584 aa23.32■■□□□ 1.32
PHGDH-211ENST00000641213 KIF3BO15066 747 aa23.31■■□□□ 1.32
PHGDH-211ENST00000641213 COL17A1Q9UMD9 1497 aaPredicted RBP23.31■■□□□ 1.32
PHGDH-211ENST00000641213 ZNF518AQ6AHZ1 1483 aa23.3■■□□□ 1.32
PHGDH-211ENST00000641213 IQGAP1P46940 1657 aa23.29■■□□□ 1.32
PHGDH-211ENST00000641213 TESK2Q96S53 571 aa23.28■■□□□ 1.32
PHGDH-211ENST00000641213 KTN1Q86UP2 1357 aaKnown RBP23.28■■□□□ 1.32
PHGDH-211ENST00000641213 DISP3Q9P2K9 1392 aa23.26■■□□□ 1.31
PHGDH-211ENST00000641213 CD109Q6YHK3 1445 aa23.26■■□□□ 1.31
PHGDH-211ENST00000641213 KIF1BO60333 1816 aa23.25■■□□□ 1.31
PHGDH-211ENST00000641213 NEURL4Q96JN8 1562 aa23.25■■□□□ 1.31
PHGDH-211ENST00000641213 EFCAB6Q5THR3 1501 aa23.24■■□□□ 1.31
PHGDH-211ENST00000641213 RALBP1Q15311 655 aa23.23■■□□□ 1.31
PHGDH-211ENST00000641213 PPRC1Q5VV67 1664 aaKnown RBP23.23■■□□□ 1.31
PHGDH-211ENST00000641213 STAC3Q96MF2 364 aa23.23■■□□□ 1.31
PHGDH-211ENST00000641213 MYBBP1AQ9BQG0 1328 aaKnown RBP23.22■■□□□ 1.31
PHGDH-211ENST00000641213 KIAA1210Q9ULL0 1709 aa23.22■■□□□ 1.31
PHGDH-211ENST00000641213 PNISRQ8TF01 805 aaKnown RBP23.21■■□□□ 1.31
PHGDH-211ENST00000641213 POGZQ7Z3K3 1410 aa23.21■■□□□ 1.31
PHGDH-211ENST00000641213 TMC1Q8TDI8 760 aa23.21■■□□□ 1.31
PHGDH-211ENST00000641213 BRD4O60885 1362 aaPredicted RBP23.2■■□□□ 1.3
PHGDH-211ENST00000641213 HECW2Q9P2P5 1572 aa23.19■■□□□ 1.3
PHGDH-211ENST00000641213 PER1O15534 1290 aaPredicted RBP23.19■■□□□ 1.3
PHGDH-211ENST00000641213 LMTK2Q8IWU2 1503 aa23.19■■□□□ 1.3
PHGDH-211ENST00000641213 UGGT1Q9NYU2 1555 aa23.19■■□□□ 1.3
PHGDH-211ENST00000641213 IFT172Q9UG01 1749 aa23.19■■□□□ 1.3
PHGDH-211ENST00000641213 TMF1P82094 1093 aa23.18■■□□□ 1.3
PHGDH-211ENST00000641213 MLH3Q9UHC1 1453 aa23.18■■□□□ 1.3
PHGDH-211ENST00000641213 PARD3Q8TEW0 1356 aa23.17■■□□□ 1.3
PHGDH-211ENST00000641213 TSHZ2Q9NRE2 1034 aa23.17■■□□□ 1.3
PHGDH-211ENST00000641213 FRMPD1Q5SYB0 1578 aa23.16■■□□□ 1.3
PHGDH-211ENST00000641213 MROH2AA6NES4 1674 aa23.16■■□□□ 1.3
PHGDH-211ENST00000641213 MAP3K4Q9Y6R4 1608 aa23.15■■□□□ 1.3
PHGDH-211ENST00000641213 LRPPRCP42704 1394 aaKnown RBP23.15■■□□□ 1.3
PHGDH-211ENST00000641213 CFAP65Q6ZU64 1925 aaKnown RBP23.14■■□□□ 1.3
PHGDH-211ENST00000641213 SCAF11Q99590 1463 aaKnown RBP23.14■■□□□ 1.3
PHGDH-211ENST00000641213 ABCA6Q8N139 1617 aa23.14■■□□□ 1.3
PHGDH-211ENST00000641213 IRX6P78412 446 aaPredicted RBP23.13■■□□□ 1.29
PHGDH-211ENST00000641213 WASHC2CQ9Y4E1 1318 aa23.12■■□□□ 1.29
PHGDH-211ENST00000641213 MYOM2P54296 1465 aa23.12■■□□□ 1.29
PHGDH-211ENST00000641213 SMG6Q86US8 1419 aaKnown RBP23.11■■□□□ 1.29
PHGDH-211ENST00000641213 PANK3Q9H999 370 aa23.11■■□□□ 1.29
PHGDH-211ENST00000641213 NEO1Q92859 1461 aa23.1■■□□□ 1.29
PHGDH-211ENST00000641213 NLRP13Q86W25 1043 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms