RNA–Protein interactions for RNA: ENST00000641056.1

CASC19-208, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,292 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-208ENST00000641056 PCDHGA10Q9Y5H3 936 aa12.96□□□□□ -0.33
CASC19-208ENST00000641056 CAMK2BQ13554 666 aa12.95□□□□□ -0.34
CASC19-208ENST00000641056 PPP1R3GB7ZBB8 358 aa12.94□□□□□ -0.34
CASC19-208ENST00000641056 IFFO2Q5TF58 517 aa12.94□□□□□ -0.34
CASC19-208ENST00000641056 CECR2Q9BXF3 1484 aa12.93□□□□□ -0.34
CASC19-208ENST00000641056 MROH2BQ7Z745 1585 aa12.92□□□□□ -0.34
CASC19-208ENST00000641056 MRPL50Q8N5N7 158 aaKnown RBP12.92□□□□□ -0.34
CASC19-208ENST00000641056 BICRAQ9NZM4 1560 aa12.91□□□□□ -0.34
CASC19-208ENST00000641056 PHF14O94880 888 aa12.91□□□□□ -0.34
CASC19-208ENST00000641056 NBPF3Q9H094 633 aa12.91□□□□□ -0.34
CASC19-208ENST00000641056 PTPN5P54829 565 aa12.9□□□□□ -0.34
CASC19-208ENST00000641056 FBXW7Q969H0 707 aa12.9□□□□□ -0.34
CASC19-208ENST00000641056 WNT2BQ93097 391 aa12.89□□□□□ -0.35
CASC19-208ENST00000641056 TYW1BQ6NUM6 668 aa12.88□□□□□ -0.35
CASC19-208ENST00000641056 RABGEF1Q9UJ41 708 aa12.88□□□□□ -0.35
CASC19-208ENST00000641056 COL9A1P20849 921 aa12.87□□□□□ -0.35
CASC19-208ENST00000641056 SMARCA4P51532 1647 aa12.87□□□□□ -0.35
CASC19-208ENST00000641056 GOLGA8CPA6NN73 597 aa12.85□□□□□ -0.35
CASC19-208ENST00000641056 PROX2Q3B8N5 592 aa12.84□□□□□ -0.35
CASC19-208ENST00000641056 EPAS1Q99814 870 aa12.82□□□□□ -0.36
CASC19-208ENST00000641056 WIZO95785 1651 aa12.81□□□□□ -0.36
CASC19-208ENST00000641056 DPYSL4O14531 572 aa12.8□□□□□ -0.36
CASC19-208ENST00000641056 ONECUT3O60422 494 aaPredicted RBP12.8□□□□□ -0.36
CASC19-208ENST00000641056 RGS20O76081 388 aa12.8□□□□□ -0.36
CASC19-208ENST00000641056 LAPTM4BQ86VI4 370 aa12.8□□□□□ -0.36
CASC19-208ENST00000641056 BBXQ8WY36 941 aaPredicted RBP12.8□□□□□ -0.36
CASC19-208ENST00000641056 TOP2AP11388 1531 aaKnown RBP12.78□□□□□ -0.36
CASC19-208ENST00000641056 PEG3Q9GZU2 1588 aa12.77□□□□□ -0.36
CASC19-208ENST00000641056 C6orf132Q5T0Z8 1188 aa12.77□□□□□ -0.37
CASC19-208ENST00000641056 A0A0G2JS52 829 aa12.76□□□□□ -0.37
CASC19-208ENST00000641056 ANKK1Q8NFD2 765 aa12.76□□□□□ -0.37
CASC19-208ENST00000641056 KIAA1468Q9P260 1216 aa12.74□□□□□ -0.37
CASC19-208ENST00000641056 ITGBL1O95965 494 aaPredicted RBP12.73□□□□□ -0.37
CASC19-208ENST00000641056 SOWAHBA6NEL2 793 aa12.72□□□□□ -0.37
CASC19-208ENST00000641056 PDIA6Q15084 440 aa12.72□□□□□ -0.37
CASC19-208ENST00000641056 TRIM6-TRIM34B2RNG4 842 aa12.71□□□□□ -0.37
CASC19-208ENST00000641056 ZFRQ96KR1 1074 aaKnown RBP12.71□□□□□ -0.37
CASC19-208ENST00000641056 BCAMP50895 628 aa12.7□□□□□ -0.38
CASC19-208ENST00000641056 NYAP1Q6ZVC0 841 aa12.69□□□□□ -0.38
CASC19-208ENST00000641056 DDX12PQ92771 950 aa12.68□□□□□ -0.38
CASC19-208ENST00000641056 EN1Q05925 392 aaPredicted RBP12.67□□□□□ -0.38
CASC19-208ENST00000641056 EIF4G1Q04637 1599 aaKnown RBP12.66□□□□□ -0.38
CASC19-208ENST00000641056 FAM98CQ17RN3 349 aaKnown RBP12.66□□□□□ -0.38
CASC19-208ENST00000641056 ARIH1Q9Y4X5 557 aaPredicted RBP12.66□□□□□ -0.38
CASC19-208ENST00000641056 SPDYE16A6NNV3 312 aaPredicted RBP12.65□□□□□ -0.38
CASC19-208ENST00000641056 RBM33Q96EV2 1170 aaKnown RBP12.65□□□□□ -0.38
CASC19-208ENST00000641056 SEPT9Q9UHD8 586 aaPredicted RBP12.65□□□□□ -0.38
CASC19-208ENST00000641056 SMARCA2P51531 1590 aa12.64□□□□□ -0.39
CASC19-208ENST00000641056 SPRYD3Q8NCJ5 442 aa12.63□□□□□ -0.39
CASC19-208ENST00000641056 WBP1LQ9NX94 342 aa12.63□□□□□ -0.39
CASC19-208ENST00000641056 NBR1Q14596 966 aa12.62□□□□□ -0.39
CASC19-208ENST00000641056 TSKSQ9UJT2 592 aa12.62□□□□□ -0.39
CASC19-208ENST00000641056 TSR1Q2NL82 804 aaKnown RBP12.61□□□□□ -0.39
CASC19-208ENST00000641056 MAP3K7O43318 606 aa12.58□□□□□ -0.4
CASC19-208ENST00000641056 E2F4Q16254 413 aa12.58□□□□□ -0.4
CASC19-208ENST00000641056 ATAD2BQ9ULI0 1458 aa12.58□□□□□ -0.4
CASC19-208ENST00000641056 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.57□□□□□ -0.4
CASC19-208ENST00000641056 TSR3Q9UJK0 312 aaKnown RBP12.57□□□□□ -0.4
CASC19-208ENST00000641056 CCDC88BA6NC98 1476 aa12.57□□□□□ -0.4
CASC19-208ENST00000641056 PRIM1P49642 420 aaKnown RBP12.56□□□□□ -0.4
CASC19-208ENST00000641056 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.56□□□□□ -0.4
CASC19-208ENST00000641056 PACS2Q86VP3 889 aa12.55□□□□□ -0.4
CASC19-208ENST00000641056 LRCH3Q96II8 777 aa12.55□□□□□ -0.4
CASC19-208ENST00000641056 IRX2Q9BZI1 471 aaPredicted RBP12.54□□□□□ -0.4
CASC19-208ENST00000641056 KCNC4Q03721 635 aa12.53□□□□□ -0.4
CASC19-208ENST00000641056 AMER1Q5JTC6 1135 aaPredicted RBP12.53□□□□□ -0.4
CASC19-208ENST00000641056 CERKQ8TCT0 537 aa12.53□□□□□ -0.4
CASC19-208ENST00000641056 FAM198AQ9UFP1 575 aa12.53□□□□□ -0.4
CASC19-208ENST00000641056 HPS5Q9UPZ3 1129 aa12.53□□□□□ -0.4
CASC19-208ENST00000641056 HMGXB3Q12766 1538 aa12.52□□□□□ -0.4
CASC19-208ENST00000641056 PRSS12P56730 875 aa12.52□□□□□ -0.41
CASC19-208ENST00000641056 CDCA7LQ96GN5 454 aa12.52□□□□□ -0.41
CASC19-208ENST00000641056 BAZ1BQ9UIG0 1483 aaKnown RBP12.51□□□□□ -0.41
CASC19-208ENST00000641056 OSBPP22059 807 aa12.48□□□□□ -0.41
CASC19-208ENST00000641056 NCAPD3P42695 1498 aa12.47□□□□□ -0.41
CASC19-208ENST00000641056 C3orf80F5H4A9 247 aa12.47□□□□□ -0.41
CASC19-208ENST00000641056 RBM27Q9P2N5 1060 aaKnown RBP12.47□□□□□ -0.41
CASC19-208ENST00000641056 PAXIP1Q6ZW49 1069 aaPredicted RBP12.45□□□□□ -0.42
CASC19-208ENST00000641056 GRXCR2A6NFK2 248 aa12.44□□□□□ -0.42
CASC19-208ENST00000641056 SMAPO00193 183 aa12.44□□□□□ -0.42
CASC19-208ENST00000641056 SAMD7Q7Z3H4 446 aa12.44□□□□□ -0.42
CASC19-208ENST00000641056 WDR70Q9NW82 654 aa12.44□□□□□ -0.42
CASC19-208ENST00000641056 NBPF26B4DH59 902 aa12.43□□□□□ -0.42
CASC19-208ENST00000641056 TATDN2Q93075 761 aa12.43□□□□□ -0.42
CASC19-208ENST00000641056 CDHR5Q9HBB8 845 aa12.43□□□□□ -0.42
CASC19-208ENST00000641056 RTN4Q9NQC3 1192 aaKnown RBP12.43□□□□□ -0.42
CASC19-208ENST00000641056 PPP4CP60510 307 aa12.42□□□□□ -0.42
CASC19-208ENST00000641056 CFAP44Q96MT7 982 aa12.42□□□□□ -0.42
CASC19-208ENST00000641056 TJAP1Q5JTD0 557 aa12.41□□□□□ -0.42
CASC19-208ENST00000641056 TTC13Q8NBP0 860 aa12.41□□□□□ -0.42
CASC19-208ENST00000641056 PNMA3Q9UL41 463 aa12.39□□□□□ -0.43
CASC19-208ENST00000641056 NPDC1Q9NQX5 325 aaPredicted RBP12.38□□□□□ -0.43
CASC19-208ENST00000641056 NUDT18Q6ZVK8 323 aa12.35□□□□□ -0.43
CASC19-208ENST00000641056 MTRQ99707 1265 aa12.34□□□□□ -0.43
CASC19-208ENST00000641056 ABCC8Q09428 1581 aa12.32□□□□□ -0.44
CASC19-208ENST00000641056 EEA1Q15075 1411 aa12.32□□□□□ -0.44
CASC19-208ENST00000641056 IL21Q9HBE4 155 aa12.32□□□□□ -0.44
CASC19-208ENST00000641056 APLP1P51693 650 aa12.3□□□□□ -0.44
CASC19-208ENST00000641056 PADI6Q6TGC4 694 aa12.3□□□□□ -0.44
CASC19-208ENST00000641056 WRNQ14191 1432 aaPredicted RBP eCLIP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms