RNA–Protein interactions for RNA: ENST00000640765.1

TRPS1-212, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 2 BASIC

Gene TRPS1, Length 9,514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-212ENST00000640765 SENP3-EIF4A1A0A087X0R7 540 aa10.34□□□□□ -0.75
TRPS1-212ENST00000640765 CT47B1P0C2W7 299 aaPredicted RBP10.34□□□□□ -0.75
TRPS1-212ENST00000640765 TSPY4P0CV99 314 aa10.34□□□□□ -0.75
TRPS1-212ENST00000640765 TSPY10P0CW01 314 aa10.34□□□□□ -0.75
TRPS1-212ENST00000640765 AXDND1Q5T1B0 1012 aaPredicted RBP10.34□□□□□ -0.75
TRPS1-212ENST00000640765 BCCIPQ9P287 314 aaKnown RBP eCLIP10.34□□□□□ -0.75
TRPS1-212ENST00000640765 MTUS2Q5JR59 1369 aa10.34□□□□□ -0.75
TRPS1-212ENST00000640765 CT47A1Q5JQC4 288 aaPredicted RBP10.34□□□□□ -0.75
TRPS1-212ENST00000640765 NAT10Q9H0A0 1025 aaKnown RBP10.34□□□□□ -0.75
TRPS1-212ENST00000640765 NAP1L1P55209 391 aaKnown RBP10.34□□□□□ -0.75
TRPS1-212ENST00000640765 SPATA24Q86W54 205 aa10.34□□□□□ -0.75
TRPS1-212ENST00000640765 DDX11Q96FC9 970 aa10.33□□□□□ -0.76
TRPS1-212ENST00000640765 MARCH6O60337 910 aa10.33□□□□□ -0.76
TRPS1-212ENST00000640765 EZRP15311 586 aaKnown RBP10.33□□□□□ -0.76
TRPS1-212ENST00000640765 ERLIN2O94905 339 aa10.33□□□□□ -0.76
TRPS1-212ENST00000640765 HDAC5Q9UQL6 1122 aa10.33□□□□□ -0.76
TRPS1-212ENST00000640765 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.33□□□□□ -0.76
TRPS1-212ENST00000640765 PPP1R15AO75807 674 aaPredicted RBP10.33□□□□□ -0.76
TRPS1-212ENST00000640765 CHMP4AQ9BY43 222 aa10.33□□□□□ -0.76
TRPS1-212ENST00000640765 SEPT11Q9NVA2 429 aaKnown RBP10.32□□□□□ -0.76
TRPS1-212ENST00000640765 CCDC47Q96A33 483 aaKnown RBP10.32□□□□□ -0.76
TRPS1-212ENST00000640765 EIF3JO75822 258 aaKnown RBP10.32□□□□□ -0.76
TRPS1-212ENST00000640765 VPS53Q5VIR6 699 aa10.32□□□□□ -0.76
TRPS1-212ENST00000640765 HSP90AB2PQ58FF8 381 aa10.32□□□□□ -0.76
TRPS1-212ENST00000640765 RSPH4AQ5TD94 716 aa10.32□□□□□ -0.76
TRPS1-212ENST00000640765 ANO8Q9HCE9 1232 aaPredicted RBP10.32□□□□□ -0.76
TRPS1-212ENST00000640765 FAM184AQ8NB25 1140 aa10.31□□□□□ -0.76
TRPS1-212ENST00000640765 SEPT7Q16181 437 aaKnown RBP10.31□□□□□ -0.76
TRPS1-212ENST00000640765 PLEKHG5O94827 1062 aa10.31□□□□□ -0.76
TRPS1-212ENST00000640765 NF2P35240 595 aa10.31□□□□□ -0.76
TRPS1-212ENST00000640765 ENOX2Q16206 610 aaKnown RBP10.31□□□□□ -0.76
TRPS1-212ENST00000640765 U2SURPO15042 1029 aaKnown RBP10.31□□□□□ -0.76
TRPS1-212ENST00000640765 ITPRIPQ8IWB1 547 aa10.31□□□□□ -0.76
TRPS1-212ENST00000640765 CCER2I3L3R5 266 aa10.3□□□□□ -0.76
TRPS1-212ENST00000640765 TCEAL9Q9UHQ7 104 aa10.3□□□□□ -0.76
TRPS1-212ENST00000640765 RABEP1Q15276 862 aa10.3□□□□□ -0.76
TRPS1-212ENST00000640765 RCAN3Q9UKA8 241 aa10.3□□□□□ -0.76
TRPS1-212ENST00000640765 CCAR1Q8IX12 1150 aaKnown RBP10.3□□□□□ -0.76
TRPS1-212ENST00000640765 CARD11Q9BXL7 1154 aa10.3□□□□□ -0.76
TRPS1-212ENST00000640765 NASPP49321 788 aaPredicted RBP10.29□□□□□ -0.76
TRPS1-212ENST00000640765 CC2D1BQ5T0F9 858 aaKnown RBP10.29□□□□□ -0.76
TRPS1-212ENST00000640765 R3HCC1Q9Y3T6 440 aaKnown RBP10.29□□□□□ -0.76
TRPS1-212ENST00000640765 SASS6Q6UVJ0 657 aa10.29□□□□□ -0.76
TRPS1-212ENST00000640765 DHX8Q14562 1220 aaKnown RBP10.29□□□□□ -0.76
TRPS1-212ENST00000640765 TSHZ2Q9NRE2 1034 aa10.29□□□□□ -0.76
TRPS1-212ENST00000640765 GORABQ5T7V8 394 aa10.29□□□□□ -0.76
TRPS1-212ENST00000640765 CFAP57Q96MR6 1250 aa10.29□□□□□ -0.76
TRPS1-212ENST00000640765 APBB1O00213 710 aa10.28□□□□□ -0.76
TRPS1-212ENST00000640765 AKAP17AQ02040 695 aaKnown RBP10.28□□□□□ -0.76
TRPS1-212ENST00000640765 CAVIN1Q6NZI2 390 aaKnown RBP10.28□□□□□ -0.76
TRPS1-212ENST00000640765 EPS15P42566 896 aa10.28□□□□□ -0.76
TRPS1-212ENST00000640765 RTF1Q92541 710 aaKnown RBP10.28□□□□□ -0.76
TRPS1-212ENST00000640765 HMGB1P09429 215 aaKnown RBP10.28□□□□□ -0.76
TRPS1-212ENST00000640765 TMX4Q9H1E5 349 aaPredicted RBP10.28□□□□□ -0.76
TRPS1-212ENST00000640765 RSF1Q96T23 1441 aaPredicted RBP10.27□□□□□ -0.77
TRPS1-212ENST00000640765 WWC1Q8IX03 1113 aa10.27□□□□□ -0.77
TRPS1-212ENST00000640765 FAM107BQ9H098 131 aa10.27□□□□□ -0.77
TRPS1-212ENST00000640765 FOXD4L1Q9NU39 408 aa10.27□□□□□ -0.77
TRPS1-212ENST00000640765 SLC26A8Q96RN1 970 aa10.26□□□□□ -0.77
TRPS1-212ENST00000640765 PPM1EQ8WY54 764 aa10.26□□□□□ -0.77
TRPS1-212ENST00000640765 CGNL1Q0VF96 1302 aa10.26□□□□□ -0.77
TRPS1-212ENST00000640765 GBP2P32456 591 aaPredicted RBP10.26□□□□□ -0.77
TRPS1-212ENST00000640765 IQCEQ6IPM2 695 aa10.26□□□□□ -0.77
TRPS1-212ENST00000640765 CENPHQ9H3R5 247 aa10.26□□□□□ -0.77
TRPS1-212ENST00000640765 CNKSR2Q8WXI2 1034 aa10.25□□□□□ -0.77
TRPS1-212ENST00000640765 ERLIN1O75477 346 aa10.25□□□□□ -0.77
TRPS1-212ENST00000640765 NPM1P06748 294 aaKnown RBP eCLIP10.25□□□□□ -0.77
TRPS1-212ENST00000640765 FOXD4L5Q5VV16 416 aaPredicted RBP10.25□□□□□ -0.77
TRPS1-212ENST00000640765 FOXD4L4Q8WXT5 416 aaPredicted RBP10.25□□□□□ -0.77
TRPS1-212ENST00000640765 MRE11P49959 708 aa10.25□□□□□ -0.77
TRPS1-212ENST00000640765 FANCIQ9NVI1 1328 aa10.25□□□□□ -0.77
TRPS1-212ENST00000640765 NOL8Q76FK4 1167 aaKnown RBP10.25□□□□□ -0.77
TRPS1-212ENST00000640765 TRIM29Q14134 588 aa10.25□□□□□ -0.77
TRPS1-212ENST00000640765 LETM1O95202 739 aaPredicted RBP10.24□□□□□ -0.77
TRPS1-212ENST00000640765 MCTP1Q6DN14 999 aa10.24□□□□□ -0.77
TRPS1-212ENST00000640765 RNF20Q5VTR2 975 aa10.24□□□□□ -0.77
TRPS1-212ENST00000640765 AEBP1Q8IUX7 1158 aa10.24□□□□□ -0.77
TRPS1-212ENST00000640765 CALCOCO1Q9P1Z2 691 aa10.24□□□□□ -0.77
TRPS1-212ENST00000640765 FAM161AQ3B820 660 aa10.24□□□□□ -0.77
TRPS1-212ENST00000640765 CEP63Q96MT8 703 aa10.24□□□□□ -0.77
TRPS1-212ENST00000640765 GOLGA6L10A0A0M3HER8 536 aa10.24□□□□□ -0.77
TRPS1-212ENST00000640765 SMARCE1Q969G3 411 aa10.24□□□□□ -0.77
TRPS1-212ENST00000640765 SSR1P43307 286 aaKnown RBP10.23□□□□□ -0.77
TRPS1-212ENST00000640765 KTN1Q86UP2 1357 aaKnown RBP10.23□□□□□ -0.77
TRPS1-212ENST00000640765 LRRFIP1Q32MZ4 808 aaKnown RBP10.23□□□□□ -0.77
TRPS1-212ENST00000640765 OLFM4Q6UX06 510 aa10.23□□□□□ -0.77
TRPS1-212ENST00000640765 FEZ1Q99689 392 aa10.23□□□□□ -0.77
TRPS1-212ENST00000640765 TXLNBQ8N3L3 684 aa10.23□□□□□ -0.77
TRPS1-212ENST00000640765 GPATCH11Q8N954 259 aa10.23□□□□□ -0.77
TRPS1-212ENST00000640765 CCDC146Q8IYE0 955 aa10.23□□□□□ -0.77
TRPS1-212ENST00000640765 MAPK8IP2Q13387 824 aaPredicted RBP10.23□□□□□ -0.77
TRPS1-212ENST00000640765 SKIDA1Q1XH10 827 aa10.23□□□□□ -0.77
TRPS1-212ENST00000640765 CPLX2Q6PUV4 134 aaKnown RBP10.23□□□□□ -0.77
TRPS1-212ENST00000640765 LRRCC1Q9C099 1032 aa10.23□□□□□ -0.77
TRPS1-212ENST00000640765 OFD1O75665 1012 aa10.22□□□□□ -0.77
TRPS1-212ENST00000640765 BICD2Q8TD16 824 aa10.22□□□□□ -0.77
TRPS1-212ENST00000640765 RRP7BPQ9NSQ0 103 aa10.22□□□□□ -0.77
TRPS1-212ENST00000640765 RBM33Q96EV2 1170 aaKnown RBP10.22□□□□□ -0.77
TRPS1-212ENST00000640765 CLIP1P30622 1438 aa10.22□□□□□ -0.77
TRPS1-212ENST00000640765 ANKRD62A6NC57 917 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms