RNA–Protein interactions for RNA: ENST00000640688.1

GABRD-216, Transcript of gamma-aminobutyric acid type A receptor delta subunit, humanhuman

TSL 3

Gene GABRD, Length 1,295 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRD-216ENST00000640688 DNMT1P26358 1616 aaKnown RBP31.38■■■□□ 2.61
GABRD-216ENST00000640688 KANK4Q5T7N3 995 aaPredicted RBP31.38■■■□□ 2.61
GABRD-216ENST00000640688 PKD2Q13563 968 aa31.37■■■□□ 2.61
GABRD-216ENST00000640688 A2ML1A8K2U0 1454 aa31.37■■■□□ 2.61
GABRD-216ENST00000640688 KDM5DQ9BY66 1539 aa31.37■■■□□ 2.61
GABRD-216ENST00000640688 IQSEC2Q5JU85 1478 aa31.33■■■□□ 2.61
GABRD-216ENST00000640688 PZPP20742 1482 aa31.33■■■□□ 2.61
GABRD-216ENST00000640688 TNRQ92752 1358 aa31.32■■■□□ 2.6
GABRD-216ENST00000640688 TSPY4P0CV99 314 aa31.32■■■□□ 2.6
GABRD-216ENST00000640688 TSPY10P0CW01 314 aa31.32■■■□□ 2.6
GABRD-216ENST00000640688 WASHC2CQ9Y4E1 1318 aa31.31■■■□□ 2.6
GABRD-216ENST00000640688 FAM135AQ9P2D6 1515 aa31.29■■■□□ 2.6
GABRD-216ENST00000640688 MAST1Q9Y2H9 1570 aa31.26■■■□□ 2.6
GABRD-216ENST00000640688 MAP3K1Q13233 1512 aa31.26■■■□□ 2.59
GABRD-216ENST00000640688 NEURL4Q96JN8 1562 aa31.24■■■□□ 2.59
GABRD-216ENST00000640688 POLR1AO95602 1720 aaPredicted RBP31.24■■■□□ 2.59
GABRD-216ENST00000640688 RNF17Q9BXT8 1623 aaKnown RBP31.24■■■□□ 2.59
GABRD-216ENST00000640688 MYOM3Q5VTT5 1437 aa31.24■■■□□ 2.59
GABRD-216ENST00000640688 DISP3Q9P2K9 1392 aa31.22■■■□□ 2.59
GABRD-216ENST00000640688 MIA2Q96PC5 1412 aa31.21■■■□□ 2.59
GABRD-216ENST00000640688 ABCC3O15438 1527 aa31.19■■■□□ 2.58
GABRD-216ENST00000640688 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.18■■■□□ 2.58
GABRD-216ENST00000640688 MROH1Q8NDA8 1641 aa31.17■■■□□ 2.58
GABRD-216ENST00000640688 UBAP1LF5GYI3 381 aa31.16■■■□□ 2.58
GABRD-216ENST00000640688 ILDR2Q71H61 639 aa31.16■■■□□ 2.58
GABRD-216ENST00000640688 EIF2AK4Q9P2K8 1649 aaKnown RBP31.15■■■□□ 2.58
GABRD-216ENST00000640688 NLRP1Q9C000 1473 aa31.14■■■□□ 2.58
GABRD-216ENST00000640688 UGGT1Q9NYU2 1555 aa31.14■■■□□ 2.58
GABRD-216ENST00000640688 ZC3H13Q5T200 1668 aaKnown RBP31.13■■■□□ 2.57
GABRD-216ENST00000640688 CEP152O94986 1710 aa31.12■■■□□ 2.57
GABRD-216ENST00000640688 SPATA31D1Q6ZQQ2 1576 aa31.1■■■□□ 2.57
GABRD-216ENST00000640688 THEMISQ8N1K5 641 aaPredicted RBP31.1■■■□□ 2.57
GABRD-216ENST00000640688 CFAP65Q6ZU64 1925 aaKnown RBP31.1■■■□□ 2.57
GABRD-216ENST00000640688 ANKLE2Q86XL3 938 aa31.09■■■□□ 2.57
GABRD-216ENST00000640688 DUOX2Q9NRD8 1548 aa31.08■■■□□ 2.57
GABRD-216ENST00000640688 ERVK-7P63135 1459 aa31.07■■■□□ 2.56
GABRD-216ENST00000640688 SHANK2Q9UPX8 1470 aa31.07■■■□□ 2.56
GABRD-216ENST00000640688 ABCC5O15440 1437 aa31.07■■■□□ 2.56
GABRD-216ENST00000640688 CROCC2H7BZ55 1655 aa31.06■■■□□ 2.56
GABRD-216ENST00000640688 PTPN23Q9H3S7 1636 aa31.06■■■□□ 2.56
GABRD-216ENST00000640688 VWDEQ8N2E2 1590 aa31.05■■■□□ 2.56
GABRD-216ENST00000640688 DEPDC5O75140 1603 aa31.04■■■□□ 2.56
GABRD-216ENST00000640688 MED14O60244 1454 aa31.03■■■□□ 2.56
GABRD-216ENST00000640688 NPHP4O75161 1426 aaPredicted RBP31.03■■■□□ 2.56
GABRD-216ENST00000640688 CPS1P31327 1500 aa31.02■■■□□ 2.56
GABRD-216ENST00000640688 KIF15Q9NS87 1388 aa31.02■■■□□ 2.56
GABRD-216ENST00000640688 RRP7BPQ9NSQ0 103 aa31.01■■■□□ 2.55
GABRD-216ENST00000640688 IQGAP1P46940 1657 aa31■■■□□ 2.55
GABRD-216ENST00000640688 APLP2Q06481 763 aa30.97■■■□□ 2.55
GABRD-216ENST00000640688 UBR1Q8IWV7 1749 aa30.97■■■□□ 2.55
GABRD-216ENST00000640688 PRDM15P57071 1507 aaPredicted RBP30.97■■■□□ 2.55
GABRD-216ENST00000640688 DAPK1P53355 1430 aa30.97■■■□□ 2.55
GABRD-216ENST00000640688 FGD6Q6ZV73 1430 aa30.95■■■□□ 2.54
GABRD-216ENST00000640688 ERBINQ96RT1 1412 aa30.95■■■□□ 2.54
GABRD-216ENST00000640688 STRCP1A6NGW2 1772 aa30.94■■■□□ 2.54
GABRD-216ENST00000640688 PIP4K2BP78356 416 aa30.93■■■□□ 2.54
GABRD-216ENST00000640688 SCAF1Q9H7N4 1312 aaKnown RBP30.92■■■□□ 2.54
GABRD-216ENST00000640688 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.91■■■□□ 2.54
GABRD-216ENST00000640688 CHIC2Q9UKJ5 165 aa30.9■■■□□ 2.54
GABRD-216ENST00000640688 ARHGAP31Q2M1Z3 1444 aa30.89■■■□□ 2.53
GABRD-216ENST00000640688 ALKQ9UM73 1620 aa30.88■■■□□ 2.53
GABRD-216ENST00000640688 HSPA1LP34931 641 aa30.88■■■□□ 2.53
GABRD-216ENST00000640688 SOCS7O14512 581 aa30.87■■■□□ 2.53
GABRD-216ENST00000640688 TOM1O60784 492 aa30.87■■■□□ 2.53
GABRD-216ENST00000640688 LTKP29376 864 aa30.85■■■□□ 2.53
GABRD-216ENST00000640688 ARHGAP23Q9P227 1491 aa30.83■■■□□ 2.53
GABRD-216ENST00000640688 SCAF11Q99590 1463 aaKnown RBP30.82■■■□□ 2.53
GABRD-216ENST00000640688 PIK3C2BO00750 1634 aa30.82■■■□□ 2.52
GABRD-216ENST00000640688 LRRC7Q96NW7 1537 aa30.82■■■□□ 2.52
GABRD-216ENST00000640688 SLIT1O75093 1534 aa30.81■■■□□ 2.52
GABRD-216ENST00000640688 ANKRD30AQ9BXX3 1397 aa30.79■■■□□ 2.52
GABRD-216ENST00000640688 TXNDC2Q86VQ3 553 aa30.78■■■□□ 2.52
GABRD-216ENST00000640688 KANK1Q14678 1352 aa30.78■■■□□ 2.52
GABRD-216ENST00000640688 LMTK2Q8IWU2 1503 aa30.76■■■□□ 2.51
GABRD-216ENST00000640688 SYNMO15061 1565 aa30.75■■■□□ 2.51
GABRD-216ENST00000640688 MED1Q15648 1581 aaPredicted RBP30.71■■■□□ 2.51
GABRD-216ENST00000640688 ADGRL2O95490 1459 aa30.71■■■□□ 2.51
GABRD-216ENST00000640688 IDI1Q13907 227 aa30.71■■■□□ 2.51
GABRD-216ENST00000640688 TMEM2Q9UHN6 1383 aa30.7■■■□□ 2.51
GABRD-216ENST00000640688 FAM50AQ14320 339 aaKnown RBP30.7■■■□□ 2.51
GABRD-216ENST00000640688 XIRP1Q702N8 1843 aaKnown RBP30.68■■■□□ 2.5
GABRD-216ENST00000640688 EFCAB6Q5THR3 1501 aa30.68■■■□□ 2.5
GABRD-216ENST00000640688 SENP3Q9H4L4 574 aaPredicted RBP30.68■■■□□ 2.5
GABRD-216ENST00000640688 EID1Q9Y6B2 187 aa30.68■■■□□ 2.5
GABRD-216ENST00000640688 STAG3Q9UJ98 1225 aa30.67■■■□□ 2.5
GABRD-216ENST00000640688 NOS1P29475 1434 aa30.65■■■□□ 2.5
GABRD-216ENST00000640688 KDM5AP29375 1690 aaKnown RBP30.65■■■□□ 2.5
GABRD-216ENST00000640688 ANKRD50Q9ULJ7 1429 aa30.61■■■□□ 2.49
GABRD-216ENST00000640688 ADGRB3O60242 1522 aa30.58■■■□□ 2.49
GABRD-216ENST00000640688 TET3O43151 1660 aa30.58■■■□□ 2.49
GABRD-216ENST00000640688 SLC26A8Q96RN1 970 aa30.56■■■□□ 2.48
GABRD-216ENST00000640688 MYO5BQ9ULV0 1848 aa30.54■■■□□ 2.48
GABRD-216ENST00000640688 SLC52A1Q9NWF4 448 aa30.51■■■□□ 2.47
GABRD-216ENST00000640688 RPRD2Q5VT52 1461 aaKnown RBP30.5■■■□□ 2.47
GABRD-216ENST00000640688 RBM33Q96EV2 1170 aaKnown RBP30.5■■■□□ 2.47
GABRD-216ENST00000640688 TMEM94Q12767 1356 aa30.5■■■□□ 2.47
GABRD-216ENST00000640688 KCNA6P17658 529 aa30.49■■■□□ 2.47
GABRD-216ENST00000640688 UNC13BO14795 1591 aa30.48■■■□□ 2.47
GABRD-216ENST00000640688 GCC2Q8IWJ2 1684 aa30.48■■■□□ 2.47
GABRD-216ENST00000640688 ZFYVE9O95405 1425 aa30.45■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms