RNA–Protein interactions for RNA: ENST00000640646.1

PRICKLE1-218, Transcript of prickle planar cell polarity protein 1, humanhuman

TSL 1 (best)

Gene PRICKLE1, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1-218ENST00000640646 LOC105371045A0A1W2PR82 267 aa23.1■■□□□ 1.29
PRICKLE1-218ENST00000640646 A2ML1A8K2U0 1454 aa23.1■■□□□ 1.29
PRICKLE1-218ENST00000640646 MAST1Q9Y2H9 1570 aa23.1■■□□□ 1.29
PRICKLE1-218ENST00000640646 PZPP20742 1482 aa23.09■■□□□ 1.29
PRICKLE1-218ENST00000640646 NCKAP5LQ9HCH0 1330 aa23.08■■□□□ 1.29
PRICKLE1-218ENST00000640646 KIF3BO15066 747 aa23.06■■□□□ 1.28
PRICKLE1-218ENST00000640646 RNF17Q9BXT8 1623 aaKnown RBP23.06■■□□□ 1.28
PRICKLE1-218ENST00000640646 PKD2Q13563 968 aa23.04■■□□□ 1.28
PRICKLE1-218ENST00000640646 KANK4Q5T7N3 995 aaPredicted RBP23.04■■□□□ 1.28
PRICKLE1-218ENST00000640646 NEURL4Q96JN8 1562 aa23.02■■□□□ 1.28
PRICKLE1-218ENST00000640646 FBXO31Q5XUX0 539 aaPredicted RBP23.02■■□□□ 1.28
PRICKLE1-218ENST00000640646 ZNF335Q9H4Z2 1342 aaPredicted RBP23.02■■□□□ 1.28
PRICKLE1-218ENST00000640646 POLR1AO95602 1720 aaPredicted RBP23.02■■□□□ 1.28
PRICKLE1-218ENST00000640646 EIF2AK4Q9P2K8 1649 aaKnown RBP23.01■■□□□ 1.27
PRICKLE1-218ENST00000640646 MYOM3Q5VTT5 1437 aa23.01■■□□□ 1.27
PRICKLE1-218ENST00000640646 MIA2Q96PC5 1412 aa23.01■■□□□ 1.27
PRICKLE1-218ENST00000640646 TNRQ92752 1358 aa23.01■■□□□ 1.27
PRICKLE1-218ENST00000640646 MROH1Q8NDA8 1641 aa23■■□□□ 1.27
PRICKLE1-218ENST00000640646 ZC3H13Q5T200 1668 aaKnown RBP22.99■■□□□ 1.27
PRICKLE1-218ENST00000640646 TSPY4P0CV99 314 aa22.98■■□□□ 1.27
PRICKLE1-218ENST00000640646 TSPY10P0CW01 314 aa22.98■■□□□ 1.27
PRICKLE1-218ENST00000640646 ABCC3O15438 1527 aa22.98■■□□□ 1.27
PRICKLE1-218ENST00000640646 WASHC2CQ9Y4E1 1318 aa22.97■■□□□ 1.27
PRICKLE1-218ENST00000640646 NLRP1Q9C000 1473 aa22.95■■□□□ 1.26
PRICKLE1-218ENST00000640646 SPATA31D1Q6ZQQ2 1576 aa22.94■■□□□ 1.26
PRICKLE1-218ENST00000640646 CROCC2H7BZ55 1655 aa22.93■■□□□ 1.26
PRICKLE1-218ENST00000640646 UGGT1Q9NYU2 1555 aa22.91■■□□□ 1.26
PRICKLE1-218ENST00000640646 DUOX2Q9NRD8 1548 aa22.9■■□□□ 1.26
PRICKLE1-218ENST00000640646 CEP152O94986 1710 aa22.9■■□□□ 1.26
PRICKLE1-218ENST00000640646 SHANK2Q9UPX8 1470 aa22.9■■□□□ 1.26
PRICKLE1-218ENST00000640646 DEPDC5O75140 1603 aa22.9■■□□□ 1.26
PRICKLE1-218ENST00000640646 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.89■■□□□ 1.25
PRICKLE1-218ENST00000640646 MED14O60244 1454 aa22.88■■□□□ 1.25
PRICKLE1-218ENST00000640646 PTPN23Q9H3S7 1636 aa22.88■■□□□ 1.25
PRICKLE1-218ENST00000640646 PRDM15P57071 1507 aaPredicted RBP22.87■■□□□ 1.25
PRICKLE1-218ENST00000640646 ERVK-7P63135 1459 aa22.87■■□□□ 1.25
PRICKLE1-218ENST00000640646 ABCC5O15440 1437 aa22.87■■□□□ 1.25
PRICKLE1-218ENST00000640646 VWDEQ8N2E2 1590 aa22.87■■□□□ 1.25
PRICKLE1-218ENST00000640646 CPS1P31327 1500 aa22.84■■□□□ 1.25
PRICKLE1-218ENST00000640646 ERBINQ96RT1 1412 aa22.82■■□□□ 1.24
PRICKLE1-218ENST00000640646 DISP3Q9P2K9 1392 aa22.82■■□□□ 1.24
PRICKLE1-218ENST00000640646 THEMISQ8N1K5 641 aaPredicted RBP22.82■■□□□ 1.24
PRICKLE1-218ENST00000640646 IQGAP1P46940 1657 aa22.81■■□□□ 1.24
PRICKLE1-218ENST00000640646 KIF15Q9NS87 1388 aa22.81■■□□□ 1.24
PRICKLE1-218ENST00000640646 UBR1Q8IWV7 1749 aa22.81■■□□□ 1.24
PRICKLE1-218ENST00000640646 NPHP4O75161 1426 aaPredicted RBP22.81■■□□□ 1.24
PRICKLE1-218ENST00000640646 DAPK1P53355 1430 aa22.81■■□□□ 1.24
PRICKLE1-218ENST00000640646 FGD6Q6ZV73 1430 aa22.81■■□□□ 1.24
PRICKLE1-218ENST00000640646 UBAP1LF5GYI3 381 aa22.8■■□□□ 1.24
PRICKLE1-218ENST00000640646 ANKLE2Q86XL3 938 aa22.8■■□□□ 1.24
PRICKLE1-218ENST00000640646 ILDR2Q71H61 639 aa22.79■■□□□ 1.24
PRICKLE1-218ENST00000640646 ARHGAP31Q2M1Z3 1444 aa22.79■■□□□ 1.24
PRICKLE1-218ENST00000640646 STRCP1A6NGW2 1772 aa22.77■■□□□ 1.24
PRICKLE1-218ENST00000640646 ALKQ9UM73 1620 aa22.76■■□□□ 1.23
PRICKLE1-218ENST00000640646 CFAP65Q6ZU64 1925 aaKnown RBP22.76■■□□□ 1.23
PRICKLE1-218ENST00000640646 ARHGAP23Q9P227 1491 aa22.73■■□□□ 1.23
PRICKLE1-218ENST00000640646 SLIT1O75093 1534 aa22.72■■□□□ 1.23
PRICKLE1-218ENST00000640646 RRP7BPQ9NSQ0 103 aa22.72■■□□□ 1.23
PRICKLE1-218ENST00000640646 LMTK2Q8IWU2 1503 aa22.72■■□□□ 1.23
PRICKLE1-218ENST00000640646 PIK3C2BO00750 1634 aa22.69■■□□□ 1.22
PRICKLE1-218ENST00000640646 SYNMO15061 1565 aa22.69■■□□□ 1.22
PRICKLE1-218ENST00000640646 APLP2Q06481 763 aa22.69■■□□□ 1.22
PRICKLE1-218ENST00000640646 ADGRL2O95490 1459 aa22.68■■□□□ 1.22
PRICKLE1-218ENST00000640646 SCAF11Q99590 1463 aaKnown RBP22.68■■□□□ 1.22
PRICKLE1-218ENST00000640646 LRRC7Q96NW7 1537 aa22.67■■□□□ 1.22
PRICKLE1-218ENST00000640646 ANKRD30AQ9BXX3 1397 aa22.66■■□□□ 1.22
PRICKLE1-218ENST00000640646 KDM5AP29375 1690 aaKnown RBP22.66■■□□□ 1.22
PRICKLE1-218ENST00000640646 EFCAB6Q5THR3 1501 aa22.63■■□□□ 1.21
PRICKLE1-218ENST00000640646 LTKP29376 864 aa22.63■■□□□ 1.21
PRICKLE1-218ENST00000640646 TOM1O60784 492 aa22.62■■□□□ 1.21
PRICKLE1-218ENST00000640646 SOCS7O14512 581 aa22.61■■□□□ 1.21
PRICKLE1-218ENST00000640646 HSPA1LP34931 641 aa22.61■■□□□ 1.21
PRICKLE1-218ENST00000640646 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.61■■□□□ 1.21
PRICKLE1-218ENST00000640646 CHIC2Q9UKJ5 165 aa22.61■■□□□ 1.21
PRICKLE1-218ENST00000640646 KANK1Q14678 1352 aa22.61■■□□□ 1.21
PRICKLE1-218ENST00000640646 NOS1P29475 1434 aa22.6■■□□□ 1.21
PRICKLE1-218ENST00000640646 XIRP1Q702N8 1843 aaKnown RBP22.59■■□□□ 1.21
PRICKLE1-218ENST00000640646 PIP4K2BP78356 416 aa22.59■■□□□ 1.21
PRICKLE1-218ENST00000640646 TMEM2Q9UHN6 1383 aa22.59■■□□□ 1.21
PRICKLE1-218ENST00000640646 MED1Q15648 1581 aaPredicted RBP22.57■■□□□ 1.2
PRICKLE1-218ENST00000640646 TXNDC2Q86VQ3 553 aa22.56■■□□□ 1.2
PRICKLE1-218ENST00000640646 SCAF1Q9H7N4 1312 aaKnown RBP22.55■■□□□ 1.2
PRICKLE1-218ENST00000640646 ADGRB3O60242 1522 aa22.54■■□□□ 1.2
PRICKLE1-218ENST00000640646 IDI1Q13907 227 aa22.54■■□□□ 1.2
PRICKLE1-218ENST00000640646 TET3O43151 1660 aa22.54■■□□□ 1.2
PRICKLE1-218ENST00000640646 ANKRD50Q9ULJ7 1429 aa22.52■■□□□ 1.2
PRICKLE1-218ENST00000640646 RPRD2Q5VT52 1461 aaKnown RBP22.52■■□□□ 1.2
PRICKLE1-218ENST00000640646 UNC13BO14795 1591 aa22.51■■□□□ 1.19
PRICKLE1-218ENST00000640646 EID1Q9Y6B2 187 aa22.49■■□□□ 1.19
PRICKLE1-218ENST00000640646 FAM50AQ14320 339 aaKnown RBP22.48■■□□□ 1.19
PRICKLE1-218ENST00000640646 GCC2Q8IWJ2 1684 aa22.47■■□□□ 1.19
PRICKLE1-218ENST00000640646 NWD1Q149M9 1564 aa22.46■■□□□ 1.19
PRICKLE1-218ENST00000640646 MYO5BQ9ULV0 1848 aa22.45■■□□□ 1.19
PRICKLE1-218ENST00000640646 ZFYVE9O95405 1425 aa22.44■■□□□ 1.18
PRICKLE1-218ENST00000640646 SLC52A1Q9NWF4 448 aa22.43■■□□□ 1.18
PRICKLE1-218ENST00000640646 STAG3Q9UJ98 1225 aa22.43■■□□□ 1.18
PRICKLE1-218ENST00000640646 TMEM131LA2VDJ0 1609 aa22.42■■□□□ 1.18
PRICKLE1-218ENST00000640646 E9PCH4 1651 aa22.42■■□□□ 1.18
PRICKLE1-218ENST00000640646 ROCK1Q13464 1354 aa22.41■■□□□ 1.18
PRICKLE1-218ENST00000640646 IQGAP3Q86VI3 1631 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms