RNA–Protein interactions for RNA: ENST00000640545.1

GFAP-236, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-236ENST00000640545 KDM5DQ9BY66 1539 aa22.87■■□□□ 1.25
GFAP-236ENST00000640545 CAMSAP1Q5T5Y3 1602 aa22.86■■□□□ 1.25
GFAP-236ENST00000640545 MAST1Q9Y2H9 1570 aa22.85■■□□□ 1.25
GFAP-236ENST00000640545 FBXO31Q5XUX0 539 aaPredicted RBP22.84■■□□□ 1.25
GFAP-236ENST00000640545 TNRQ92752 1358 aa22.84■■□□□ 1.25
GFAP-236ENST00000640545 NCKAP5LQ9HCH0 1330 aa22.83■■□□□ 1.25
GFAP-236ENST00000640545 CEP170BQ9Y4F5 1589 aaPredicted RBP22.82■■□□□ 1.24
GFAP-236ENST00000640545 PZPP20742 1482 aa22.82■■□□□ 1.24
GFAP-236ENST00000640545 MYO3AQ8NEV4 1616 aa22.82■■□□□ 1.24
GFAP-236ENST00000640545 PLA2R1Q13018 1463 aa22.81■■□□□ 1.24
GFAP-236ENST00000640545 A2ML1A8K2U0 1454 aa22.8■■□□□ 1.24
GFAP-236ENST00000640545 RRP7BPQ9NSQ0 103 aa22.79■■□□□ 1.24
GFAP-236ENST00000640545 FGD6Q6ZV73 1430 aa22.79■■□□□ 1.24
GFAP-236ENST00000640545 DUOX2Q9NRD8 1548 aa22.78■■□□□ 1.24
GFAP-236ENST00000640545 PTPN23Q9H3S7 1636 aa22.78■■□□□ 1.24
GFAP-236ENST00000640545 ZNF142P52746 1687 aaPredicted RBP22.77■■□□□ 1.24
GFAP-236ENST00000640545 KIF15Q9NS87 1388 aa22.77■■□□□ 1.24
GFAP-236ENST00000640545 ABCC5O15440 1437 aa22.77■■□□□ 1.24
GFAP-236ENST00000640545 THEMISQ8N1K5 641 aaPredicted RBP22.77■■□□□ 1.24
GFAP-236ENST00000640545 SHANK2Q9UPX8 1470 aa22.76■■□□□ 1.23
GFAP-236ENST00000640545 EIF2AK4Q9P2K8 1649 aaKnown RBP22.75■■□□□ 1.23
GFAP-236ENST00000640545 DAPK1P53355 1430 aa22.74■■□□□ 1.23
GFAP-236ENST00000640545 RNF17Q9BXT8 1623 aaKnown RBP22.73■■□□□ 1.23
GFAP-236ENST00000640545 ANKRD30AQ9BXX3 1397 aa22.73■■□□□ 1.23
GFAP-236ENST00000640545 TCOF1Q13428 1488 aaKnown RBP22.73■■□□□ 1.23
GFAP-236ENST00000640545 NLRP1Q9C000 1473 aa22.73■■□□□ 1.23
GFAP-236ENST00000640545 FAM50AQ14320 339 aaKnown RBP22.72■■□□□ 1.23
GFAP-236ENST00000640545 ANKLE2Q86XL3 938 aa22.72■■□□□ 1.23
GFAP-236ENST00000640545 CHIC2Q9UKJ5 165 aa22.72■■□□□ 1.23
GFAP-236ENST00000640545 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.71■■□□□ 1.23
GFAP-236ENST00000640545 ERBINQ96RT1 1412 aa22.71■■□□□ 1.23
GFAP-236ENST00000640545 DNMT1P26358 1616 aaKnown RBP22.71■■□□□ 1.23
GFAP-236ENST00000640545 KANK1Q14678 1352 aa22.7■■□□□ 1.22
GFAP-236ENST00000640545 ABCC3O15438 1527 aa22.7■■□□□ 1.22
GFAP-236ENST00000640545 ZC3H13Q5T200 1668 aaKnown RBP22.69■■□□□ 1.22
GFAP-236ENST00000640545 ZNF335Q9H4Z2 1342 aaPredicted RBP22.67■■□□□ 1.22
GFAP-236ENST00000640545 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.66■■□□□ 1.22
GFAP-236ENST00000640545 LTBP4Q8N2S1 1624 aa22.66■■□□□ 1.22
GFAP-236ENST00000640545 UGGT1Q9NYU2 1555 aa22.66■■□□□ 1.22
GFAP-236ENST00000640545 IQSEC2Q5JU85 1478 aa22.66■■□□□ 1.22
GFAP-236ENST00000640545 CROCC2H7BZ55 1655 aa22.65■■□□□ 1.22
GFAP-236ENST00000640545 ERVK-7P63135 1459 aa22.62■■□□□ 1.21
GFAP-236ENST00000640545 SPATA31D1Q6ZQQ2 1576 aa22.62■■□□□ 1.21
GFAP-236ENST00000640545 MROH1Q8NDA8 1641 aa22.6■■□□□ 1.21
GFAP-236ENST00000640545 ARHGAP31Q2M1Z3 1444 aa22.6■■□□□ 1.21
GFAP-236ENST00000640545 PRDM15P57071 1507 aaPredicted RBP22.6■■□□□ 1.21
GFAP-236ENST00000640545 STAG3Q9UJ98 1225 aa22.58■■□□□ 1.21
GFAP-236ENST00000640545 UBAP1LF5GYI3 381 aa22.57■■□□□ 1.2
GFAP-236ENST00000640545 CEP152O94986 1710 aa22.57■■□□□ 1.2
GFAP-236ENST00000640545 NPHP4O75161 1426 aaPredicted RBP22.56■■□□□ 1.2
GFAP-236ENST00000640545 ADGRL2O95490 1459 aa22.54■■□□□ 1.2
GFAP-236ENST00000640545 POLR1AO95602 1720 aaPredicted RBP22.54■■□□□ 1.2
GFAP-236ENST00000640545 EID1Q9Y6B2 187 aa22.53■■□□□ 1.2
GFAP-236ENST00000640545 MED14O60244 1454 aa22.53■■□□□ 1.2
GFAP-236ENST00000640545 ANKRD50Q9ULJ7 1429 aa22.52■■□□□ 1.2
GFAP-236ENST00000640545 NEURL4Q96JN8 1562 aa22.51■■□□□ 1.19
GFAP-236ENST00000640545 DEPDC5O75140 1603 aa22.51■■□□□ 1.19
GFAP-236ENST00000640545 CFAP65Q6ZU64 1925 aaKnown RBP22.51■■□□□ 1.19
GFAP-236ENST00000640545 TXNDC2Q86VQ3 553 aa22.5■■□□□ 1.19
GFAP-236ENST00000640545 CPS1P31327 1500 aa22.5■■□□□ 1.19
GFAP-236ENST00000640545 LMTK2Q8IWU2 1503 aa22.49■■□□□ 1.19
GFAP-236ENST00000640545 TOM1O60784 492 aa22.47■■□□□ 1.19
GFAP-236ENST00000640545 PPARGC1BQ86YN6 1023 aaKnown RBP22.46■■□□□ 1.19
GFAP-236ENST00000640545 SLC52A1Q9NWF4 448 aa22.46■■□□□ 1.19
GFAP-236ENST00000640545 ITGAEP38570 1179 aa22.45■■□□□ 1.18
GFAP-236ENST00000640545 IDI1Q13907 227 aa22.45■■□□□ 1.18
GFAP-236ENST00000640545 SCAF11Q99590 1463 aaKnown RBP22.45■■□□□ 1.18
GFAP-236ENST00000640545 VWDEQ8N2E2 1590 aa22.44■■□□□ 1.18
GFAP-236ENST00000640545 ROCK1Q13464 1354 aa22.43■■□□□ 1.18
GFAP-236ENST00000640545 SCAF1Q9H7N4 1312 aaKnown RBP22.43■■□□□ 1.18
GFAP-236ENST00000640545 UBR1Q8IWV7 1749 aa22.43■■□□□ 1.18
GFAP-236ENST00000640545 IQGAP1P46940 1657 aa22.42■■□□□ 1.18
GFAP-236ENST00000640545 LTKP29376 864 aa22.42■■□□□ 1.18
GFAP-236ENST00000640545 TMEM2Q9UHN6 1383 aa22.41■■□□□ 1.18
GFAP-236ENST00000640545 SLIT1O75093 1534 aa22.41■■□□□ 1.18
GFAP-236ENST00000640545 EFCAB6Q5THR3 1501 aa22.4■■□□□ 1.18
GFAP-236ENST00000640545 RPRD2Q5VT52 1461 aaKnown RBP22.4■■□□□ 1.18
GFAP-236ENST00000640545 ARHGAP23Q9P227 1491 aa22.4■■□□□ 1.18
GFAP-236ENST00000640545 PIP4K2BP78356 416 aa22.39■■□□□ 1.17
GFAP-236ENST00000640545 NOS1P29475 1434 aa22.39■■□□□ 1.17
GFAP-236ENST00000640545 HDGFP51858 240 aaKnown RBP22.38■■□□□ 1.17
GFAP-236ENST00000640545 DISP3Q9P2K9 1392 aa22.38■■□□□ 1.17
GFAP-236ENST00000640545 PIK3C2BO00750 1634 aa22.36■■□□□ 1.17
GFAP-236ENST00000640545 BCANQ96GW7 911 aa22.35■■□□□ 1.17
GFAP-236ENST00000640545 KDM5AP29375 1690 aaKnown RBP22.33■■□□□ 1.16
GFAP-236ENST00000640545 NUP155O75694 1391 aa22.32■■□□□ 1.16
GFAP-236ENST00000640545 SYNMO15061 1565 aa22.31■■□□□ 1.16
GFAP-236ENST00000640545 PPP1R15AO75807 674 aaPredicted RBP22.3■■□□□ 1.16
GFAP-236ENST00000640545 CHGAP10645 457 aaKnown RBP22.3■■□□□ 1.16
GFAP-236ENST00000640545 TET3O43151 1660 aa22.3■■□□□ 1.16
GFAP-236ENST00000640545 ADGRB3O60242 1522 aa22.28■■□□□ 1.16
GFAP-236ENST00000640545 LRRC7Q96NW7 1537 aa22.28■■□□□ 1.16
GFAP-236ENST00000640545 UNC13BO14795 1591 aa22.28■■□□□ 1.16
GFAP-236ENST00000640545 SLC26A8Q96RN1 970 aa22.27■■□□□ 1.16
GFAP-236ENST00000640545 HSPA1LP34931 641 aa22.26■■□□□ 1.15
GFAP-236ENST00000640545 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.26■■□□□ 1.15
GFAP-236ENST00000640545 KCNA6P17658 529 aa22.25■■□□□ 1.15
GFAP-236ENST00000640545 GCC2Q8IWJ2 1684 aa22.23■■□□□ 1.15
GFAP-236ENST00000640545 RRBP1Q9P2E9 1410 aaKnown RBP22.23■■□□□ 1.15
GFAP-236ENST00000640545 PROSER2Q86WR7 435 aaPredicted RBP22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms