RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 ADGRL2O95490 1459 aa19.47■□□□□ 0.71
SCARB2-221ENST00000640341 ITSN2Q9NZM3 1697 aa19.47■□□□□ 0.71
SCARB2-221ENST00000640341 NLRP13Q86W25 1043 aa19.47■□□□□ 0.71
SCARB2-221ENST00000640341 KTN1Q86UP2 1357 aaKnown RBP19.47■□□□□ 0.71
SCARB2-221ENST00000640341 PTPRGP23470 1445 aa19.47■□□□□ 0.71
SCARB2-221ENST00000640341 RRP1P56182 461 aaKnown RBP19.47■□□□□ 0.71
SCARB2-221ENST00000640341 PANK3Q9H999 370 aa19.47■□□□□ 0.71
SCARB2-221ENST00000640341 KDM5CP41229 1560 aa19.46■□□□□ 0.71
SCARB2-221ENST00000640341 RALGAPBQ86X10 1494 aa19.46■□□□□ 0.71
SCARB2-221ENST00000640341 SKAP1Q86WV1 359 aa19.46■□□□□ 0.71
SCARB2-221ENST00000640341 MYT1LQ9UL68 1186 aa19.45■□□□□ 0.7
SCARB2-221ENST00000640341 ZBTB47Q9UFB7 747 aaPredicted RBP19.44■□□□□ 0.7
SCARB2-221ENST00000640341 BRD4O60885 1362 aaPredicted RBP19.43■□□□□ 0.7
SCARB2-221ENST00000640341 ADGBQ8N7X0 1667 aa19.42■□□□□ 0.7
SCARB2-221ENST00000640341 DEKP35659 375 aaKnown RBP19.42■□□□□ 0.7
SCARB2-221ENST00000640341 UHRF1BP1Q6BDS2 1440 aa19.41■□□□□ 0.7
SCARB2-221ENST00000640341 RNF123Q5XPI4 1314 aa19.4■□□□□ 0.7
SCARB2-221ENST00000640341 ABCC10Q5T3U5 1492 aa19.38■□□□□ 0.69
SCARB2-221ENST00000640341 IPO9Q96P70 1041 aaKnown RBP19.38■□□□□ 0.69
SCARB2-221ENST00000640341 DISP3Q9P2K9 1392 aa19.38■□□□□ 0.69
SCARB2-221ENST00000640341 TMF1P82094 1093 aa19.37■□□□□ 0.69
SCARB2-221ENST00000640341 NUP160Q12769 1436 aa19.37■□□□□ 0.69
SCARB2-221ENST00000640341 LRPPRCP42704 1394 aaKnown RBP19.35■□□□□ 0.69
SCARB2-221ENST00000640341 CDC42BPAQ5VT25 1732 aa19.35■□□□□ 0.69
SCARB2-221ENST00000640341 PER1O15534 1290 aaPredicted RBP19.35■□□□□ 0.69
SCARB2-221ENST00000640341 POLR1AO95602 1720 aaPredicted RBP19.35■□□□□ 0.69
SCARB2-221ENST00000640341 RTL5Q5HYW3 569 aaPredicted RBP19.35■□□□□ 0.69
SCARB2-221ENST00000640341 LAS1LQ9Y4W2 734 aaKnown RBP19.34■□□□□ 0.69
SCARB2-221ENST00000640341 FAM135AQ9P2D6 1515 aa19.34■□□□□ 0.69
SCARB2-221ENST00000640341 CCDC141Q6ZP82 1450 aa19.34■□□□□ 0.69
SCARB2-221ENST00000640341 CROCC2H7BZ55 1655 aa19.33■□□□□ 0.69
SCARB2-221ENST00000640341 PRAG1Q86YV5 1406 aa19.33■□□□□ 0.68
SCARB2-221ENST00000640341 ARHGAP5Q13017 1502 aa19.32■□□□□ 0.68
SCARB2-221ENST00000640341 TESK2Q96S53 571 aa19.32■□□□□ 0.68
SCARB2-221ENST00000640341 CRBNQ96SW2 442 aa19.32■□□□□ 0.68
SCARB2-221ENST00000640341 ADAMTS8Q9UP79 889 aa19.32■□□□□ 0.68
SCARB2-221ENST00000640341 KNSTRNQ9Y448 316 aa19.32■□□□□ 0.68
SCARB2-221ENST00000640341 PLEKHH2Q8IVE3 1493 aa19.31■□□□□ 0.68
SCARB2-221ENST00000640341 ARHGEF12Q9NZN5 1544 aa19.31■□□□□ 0.68
SCARB2-221ENST00000640341 WDR43Q15061 677 aaKnown RBP eCLIP19.31■□□□□ 0.68
SCARB2-221ENST00000640341 SHANK2Q9UPX8 1470 aa19.3■□□□□ 0.68
SCARB2-221ENST00000640341 RSPH4AQ5TD94 716 aa19.3■□□□□ 0.68
SCARB2-221ENST00000640341 PDE4AP27815 886 aa19.3■□□□□ 0.68
SCARB2-221ENST00000640341 ADCY10Q96PN6 1610 aa19.3■□□□□ 0.68
SCARB2-221ENST00000640341 SYCP2Q9BX26 1530 aa19.29■□□□□ 0.68
SCARB2-221ENST00000640341 ABCA8O94911 1581 aa19.29■□□□□ 0.68
SCARB2-221ENST00000640341 C20orf194Q5TEA3 1177 aa19.29■□□□□ 0.68
SCARB2-221ENST00000640341 PARD3Q8TEW0 1356 aa19.29■□□□□ 0.68
SCARB2-221ENST00000640341 CCDC146Q8IYE0 955 aa19.28■□□□□ 0.68
SCARB2-221ENST00000640341 PDE3BQ13370 1112 aa19.26■□□□□ 0.67
SCARB2-221ENST00000640341 AFAP1Q8N556 730 aa19.26■□□□□ 0.67
SCARB2-221ENST00000640341 A2MP01023 1474 aa19.26■□□□□ 0.67
SCARB2-221ENST00000640341 PLA2R1Q13018 1463 aa19.25■□□□□ 0.67
SCARB2-221ENST00000640341 ERBINQ96RT1 1412 aa19.25■□□□□ 0.67
SCARB2-221ENST00000640341 SAMD9LQ8IVG5 1584 aa19.24■□□□□ 0.67
SCARB2-221ENST00000640341 TCERG1O14776 1098 aaKnown RBP19.24■□□□□ 0.67
SCARB2-221ENST00000640341 KDM5DQ9BY66 1539 aa19.23■□□□□ 0.67
SCARB2-221ENST00000640341 SENP3Q9H4L4 574 aaPredicted RBP19.22■□□□□ 0.67
SCARB2-221ENST00000640341 EFCAB2Q5VUJ9 269 aa19.21■□□□□ 0.66
SCARB2-221ENST00000640341 CHGAP10645 457 aaKnown RBP19.2■□□□□ 0.66
SCARB2-221ENST00000640341 PPP2R1AP30153 589 aa19.19■□□□□ 0.66
SCARB2-221ENST00000640341 SLC4A3P48751 1232 aa19.19■□□□□ 0.66
SCARB2-221ENST00000640341 TNNT2P45379 298 aaPredicted RBP19.19■□□□□ 0.66
SCARB2-221ENST00000640341 RGS3P49796 1198 aa19.18■□□□□ 0.66
SCARB2-221ENST00000640341 BACH2Q9BYV9 841 aa19.18■□□□□ 0.66
SCARB2-221ENST00000640341 NEFMP07197 916 aa19.17■□□□□ 0.66
SCARB2-221ENST00000640341 SPAG9O60271 1321 aaKnown RBP19.17■□□□□ 0.66
SCARB2-221ENST00000640341 COL17A1Q9UMD9 1497 aaPredicted RBP19.17■□□□□ 0.66
SCARB2-221ENST00000640341 NEUROD2Q15784 382 aa19.16■□□□□ 0.66
SCARB2-221ENST00000640341 ARHGEF5Q12774 1597 aa19.15■□□□□ 0.66
SCARB2-221ENST00000640341 KIF3BO15066 747 aa19.15■□□□□ 0.66
SCARB2-221ENST00000640341 CDC42BPBQ9Y5S2 1711 aa19.15■□□□□ 0.66
SCARB2-221ENST00000640341 TTC37Q6PGP7 1564 aa19.14■□□□□ 0.65
SCARB2-221ENST00000640341 APAF1O14727 1248 aa19.13■□□□□ 0.65
SCARB2-221ENST00000640341 GOLGA2Q08379 1002 aa19.13■□□□□ 0.65
SCARB2-221ENST00000640341 TRPM1Q7Z4N2 1603 aa19.13■□□□□ 0.65
SCARB2-221ENST00000640341 GPRASP1Q5JY77 1395 aa19.13■□□□□ 0.65
SCARB2-221ENST00000640341 WASHC2CQ9Y4E1 1318 aa19.13■□□□□ 0.65
SCARB2-221ENST00000640341 PLEKHH1Q9ULM0 1364 aa19.12■□□□□ 0.65
SCARB2-221ENST00000640341 CFAP70Q5T0N1 1121 aa19.12■□□□□ 0.65
SCARB2-221ENST00000640341 DAXXQ9UER7 740 aaPredicted RBP19.12■□□□□ 0.65
SCARB2-221ENST00000640341 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.11■□□□□ 0.656e-6■■■■■ 38.2
SCARB2-221ENST00000640341 TRAPPC8Q9Y2L5 1435 aa19.1■□□□□ 0.65
SCARB2-221ENST00000640341 AMER1Q5JTC6 1135 aaPredicted RBP19.1■□□□□ 0.65
SCARB2-221ENST00000640341 DUSP27Q5VZP5 1158 aa19.09■□□□□ 0.65
SCARB2-221ENST00000640341 ERCC6L2Q5T890 1561 aa19.09■□□□□ 0.65
SCARB2-221ENST00000640341 PREX2Q70Z35 1606 aa19.09■□□□□ 0.65
SCARB2-221ENST00000640341 MAGI2Q86UL8 1455 aa19.09■□□□□ 0.65
SCARB2-221ENST00000640341 CDCA8Q53HL2 280 aa19.08■□□□□ 0.65
SCARB2-221ENST00000640341 BCAR3O75815 825 aa19.07■□□□□ 0.64
SCARB2-221ENST00000640341 SPINK5Q9NQ38 1064 aaPredicted RBP19.07■□□□□ 0.64
SCARB2-221ENST00000640341 CANXP27824 592 aaKnown RBP19.07■□□□□ 0.64
SCARB2-221ENST00000640341 MS4A1P11836 297 aa19.07■□□□□ 0.64
SCARB2-221ENST00000640341 RTN4Q9NQC3 1192 aaKnown RBP19.06■□□□□ 0.64
SCARB2-221ENST00000640341 E9PCH4 1651 aa19.05■□□□□ 0.64
SCARB2-221ENST00000640341 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.05■□□□□ 0.64
SCARB2-221ENST00000640341 RRP7AQ9Y3A4 280 aaKnown RBP19.05■□□□□ 0.64
SCARB2-221ENST00000640341 BLMP54132 1417 aaPredicted RBP19.05■□□□□ 0.64
SCARB2-221ENST00000640341 PRDM15P57071 1507 aaPredicted RBP19.04■□□□□ 0.64
SCARB2-221ENST00000640341 FRAT1Q92837 279 aaPredicted RBP19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms