RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 SYCP2Q9BX26 1530 aa11.91□□□□□ -0.5
SCARB2-220ENST00000640076 ABCC5O15440 1437 aa11.91□□□□□ -0.5
SCARB2-220ENST00000640076 DAPK1P53355 1430 aa11.91□□□□□ -0.5
SCARB2-220ENST00000640076 ARHGEF5Q12774 1597 aa11.9□□□□□ -0.5
SCARB2-220ENST00000640076 CFAP74Q9C0B2 1584 aa11.9□□□□□ -0.5
SCARB2-220ENST00000640076 HNRNPMP52272 730 aaKnown RBP eCLIP11.9□□□□□ -0.5
SCARB2-220ENST00000640076 ARHGEF12Q9NZN5 1544 aa11.9□□□□□ -0.51
SCARB2-220ENST00000640076 LMOD2Q6P5Q4 547 aa11.89□□□□□ -0.51
SCARB2-220ENST00000640076 AKNAQ7Z591 1439 aa11.89□□□□□ -0.51
SCARB2-220ENST00000640076 CROCC2H7BZ55 1655 aa11.89□□□□□ -0.51
SCARB2-220ENST00000640076 NEO1Q92859 1461 aa11.89□□□□□ -0.51
SCARB2-220ENST00000640076 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.88□□□□□ -0.51
SCARB2-220ENST00000640076 TSPOAP1O95153 1857 aa11.88□□□□□ -0.51
SCARB2-220ENST00000640076 PPRC1Q5VV67 1664 aaKnown RBP11.88□□□□□ -0.51
SCARB2-220ENST00000640076 ADGRL1O94910 1474 aa11.88□□□□□ -0.51
SCARB2-220ENST00000640076 CCDC141Q6ZP82 1450 aa11.88□□□□□ -0.51
SCARB2-220ENST00000640076 RSPH4AQ5TD94 716 aa11.87□□□□□ -0.51
SCARB2-220ENST00000640076 SHANK2Q9UPX8 1470 aa11.86□□□□□ -0.51
SCARB2-220ENST00000640076 GTPBP6O43824 516 aaPredicted RBP11.86□□□□□ -0.51
SCARB2-220ENST00000640076 NKX1-1Q15270 411 aaPredicted RBP11.86□□□□□ -0.51
SCARB2-220ENST00000640076 SCAPERQ9BY12 1400 aa11.86□□□□□ -0.51
SCARB2-220ENST00000640076 TRAPPC8Q9Y2L5 1435 aa11.86□□□□□ -0.51
SCARB2-220ENST00000640076 TEX14Q8IWB6 1497 aa11.85□□□□□ -0.51
SCARB2-220ENST00000640076 CHIC2Q9UKJ5 165 aa11.85□□□□□ -0.51
SCARB2-220ENST00000640076 C9orf84Q5VXU9 1444 aa11.85□□□□□ -0.51
SCARB2-220ENST00000640076 HFM1A2PYH4 1435 aa11.84□□□□□ -0.51
SCARB2-220ENST00000640076 ROCK1Q13464 1354 aa11.84□□□□□ -0.51
SCARB2-220ENST00000640076 CIZ1Q9ULV3 898 aaPredicted RBP11.84□□□□□ -0.51
SCARB2-220ENST00000640076 ADGBQ8N7X0 1667 aa11.84□□□□□ -0.51
SCARB2-220ENST00000640076 ADGRL2O95490 1459 aa11.84□□□□□ -0.51
SCARB2-220ENST00000640076 TSPY4P0CV99 314 aa11.83□□□□□ -0.52
SCARB2-220ENST00000640076 TSPY10P0CW01 314 aa11.83□□□□□ -0.52
SCARB2-220ENST00000640076 NEUROD2Q15784 382 aa11.83□□□□□ -0.52
SCARB2-220ENST00000640076 MAST1Q9Y2H9 1570 aa11.83□□□□□ -0.52
SCARB2-220ENST00000640076 NCOA1Q15788 1441 aa11.82□□□□□ -0.52
SCARB2-220ENST00000640076 TRHP20396 242 aaPredicted RBP11.82□□□□□ -0.52
SCARB2-220ENST00000640076 PLCD3Q8N3E9 789 aa11.82□□□□□ -0.52
SCARB2-220ENST00000640076 AFAP1Q8N556 730 aa11.82□□□□□ -0.52
SCARB2-220ENST00000640076 NAIPQ13075 1403 aa11.82□□□□□ -0.52
SCARB2-220ENST00000640076 POGZQ7Z3K3 1410 aa11.82□□□□□ -0.52
SCARB2-220ENST00000640076 RRP7BPQ9NSQ0 103 aa11.81□□□□□ -0.52
SCARB2-220ENST00000640076 ZNF518AQ6AHZ1 1483 aa11.81□□□□□ -0.52
SCARB2-220ENST00000640076 SETD5Q9C0A6 1442 aa11.81□□□□□ -0.52
SCARB2-220ENST00000640076 ANKRD30AQ9BXX3 1397 aa11.81□□□□□ -0.52
SCARB2-220ENST00000640076 GCC2Q8IWJ2 1684 aa11.81□□□□□ -0.52
SCARB2-220ENST00000640076 DENND4BO75064 1496 aaPredicted RBP11.81□□□□□ -0.52
SCARB2-220ENST00000640076 STAG3Q9UJ98 1225 aa11.81□□□□□ -0.52
SCARB2-220ENST00000640076 KDM5CP41229 1560 aa11.8□□□□□ -0.52
SCARB2-220ENST00000640076 SPAG9O60271 1321 aaKnown RBP11.8□□□□□ -0.52
SCARB2-220ENST00000640076 RICTORQ6R327 1708 aa11.8□□□□□ -0.52
SCARB2-220ENST00000640076 ZFYVE16Q7Z3T8 1539 aa11.79□□□□□ -0.52
SCARB2-220ENST00000640076 RAB3GAP2Q9H2M9 1393 aa11.79□□□□□ -0.52
SCARB2-220ENST00000640076 INO80Q9ULG1 1556 aaPredicted RBP11.79□□□□□ -0.52
SCARB2-220ENST00000640076 RTEL1-TNFRSF6BF6WH68 1400 aa11.79□□□□□ -0.52
SCARB2-220ENST00000640076 PLXNC1O60486 1568 aa11.78□□□□□ -0.52
SCARB2-220ENST00000640076 ZMYND15Q9H091 742 aa11.78□□□□□ -0.52
SCARB2-220ENST00000640076 ATP7AQ04656 1500 aa11.78□□□□□ -0.52
SCARB2-220ENST00000640076 RAPGEF3O95398 923 aa11.78□□□□□ -0.52
SCARB2-220ENST00000640076 KIF15Q9NS87 1388 aa11.77□□□□□ -0.52
SCARB2-220ENST00000640076 FRMPD1Q5SYB0 1578 aa11.77□□□□□ -0.53
SCARB2-220ENST00000640076 MLH3Q9UHC1 1453 aa11.76□□□□□ -0.53
SCARB2-220ENST00000640076 KIDINS220Q9ULH0 1771 aa11.76□□□□□ -0.53
SCARB2-220ENST00000640076 HECW2Q9P2P5 1572 aa11.76□□□□□ -0.53
SCARB2-220ENST00000640076 KDM6BO15054 1643 aa11.76□□□□□ -0.53
SCARB2-220ENST00000640076 RSPH6AQ9H0K4 717 aa11.76□□□□□ -0.53
SCARB2-220ENST00000640076 COL17A1Q9UMD9 1497 aaPredicted RBP11.75□□□□□ -0.53
SCARB2-220ENST00000640076 ZMYM4Q5VZL5 1548 aa11.74□□□□□ -0.53
SCARB2-220ENST00000640076 ANKRD50Q9ULJ7 1429 aa11.74□□□□□ -0.53
SCARB2-220ENST00000640076 DUOX2Q9NRD8 1548 aa11.73□□□□□ -0.53
SCARB2-220ENST00000640076 EIF5BO60841 1220 aaKnown RBP11.72□□□□□ -0.53
SCARB2-220ENST00000640076 MYT1LQ9UL68 1186 aa11.72□□□□□ -0.53
SCARB2-220ENST00000640076 RNF25Q96BH1 459 aaPredicted RBP11.72□□□□□ -0.53
SCARB2-220ENST00000640076 ABCA6Q8N139 1617 aa11.71□□□□□ -0.53
SCARB2-220ENST00000640076 ERBINQ96RT1 1412 aa11.71□□□□□ -0.54
SCARB2-220ENST00000640076 MAGI2Q86UL8 1455 aa11.71□□□□□ -0.54
SCARB2-220ENST00000640076 YEATS2Q9ULM3 1422 aa11.7□□□□□ -0.54
SCARB2-220ENST00000640076 DIP2CQ9Y2E4 1556 aa11.7□□□□□ -0.54
SCARB2-220ENST00000640076 DCAF8L1A6NGE4 600 aa11.69□□□□□ -0.54
SCARB2-220ENST00000640076 MIER1Q8N108 512 aa11.69□□□□□ -0.54
SCARB2-220ENST00000640076 A2MP01023 1474 aa11.69□□□□□ -0.54
SCARB2-220ENST00000640076 DHX57Q6P158 1386 aaKnown RBP11.69□□□□□ -0.54
SCARB2-220ENST00000640076 DHX29Q7Z478 1369 aaKnown RBP11.69□□□□□ -0.54
SCARB2-220ENST00000640076 ACIN1Q9UKV3 1341 aaKnown RBP11.68□□□□□ -0.54
SCARB2-220ENST00000640076 ZC3H15Q8WU90 426 aaKnown RBP11.68□□□□□ -0.54
SCARB2-220ENST00000640076 CCDC9Q9Y3X0 531 aaKnown RBP11.68□□□□□ -0.54
SCARB2-220ENST00000640076 CCER1Q8TC90 406 aaPredicted RBP11.67□□□□□ -0.54
SCARB2-220ENST00000640076 SLC24A3Q9HC58 644 aa11.67□□□□□ -0.54
SCARB2-220ENST00000640076 EIF2AK4Q9P2K8 1649 aaKnown RBP11.67□□□□□ -0.54
SCARB2-220ENST00000640076 KCNV2Q8TDN2 545 aa11.66□□□□□ -0.54
SCARB2-220ENST00000640076 TRIM52Q96A61 297 aa11.66□□□□□ -0.54
SCARB2-220ENST00000640076 UNC13BO14795 1591 aa11.65□□□□□ -0.54
SCARB2-220ENST00000640076 ARHGEF40Q8TER5 1519 aa11.65□□□□□ -0.54
SCARB2-220ENST00000640076 ATP10AO60312 1499 aa11.65□□□□□ -0.55
SCARB2-220ENST00000640076 KDM5DQ9BY66 1539 aa11.64□□□□□ -0.55
SCARB2-220ENST00000640076 DEPDC5O75140 1603 aa11.64□□□□□ -0.55
SCARB2-220ENST00000640076 REREQ9P2R6 1566 aa11.64□□□□□ -0.55
SCARB2-220ENST00000640076 BCORL1Q5H9F3 1711 aa11.64□□□□□ -0.55
SCARB2-220ENST00000640076 PZPP20742 1482 aa11.64□□□□□ -0.55
SCARB2-220ENST00000640076 ARID3AQ99856 593 aa11.63□□□□□ -0.55
SCARB2-220ENST00000640076 NUP155O75694 1391 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms