RNA–Protein interactions for RNA: ENST00000639871.1

VPS51-217, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 5 BASIC

Gene VPS51, Length 243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-217ENST00000639871 ZNF142P52746 1687 aaPredicted RBP27.75■■■□□ 2.03
VPS51-217ENST00000639871 PLA2R1Q13018 1463 aa27.75■■■□□ 2.03
VPS51-217ENST00000639871 CEP170BQ9Y4F5 1589 aaPredicted RBP27.73■■■□□ 2.03
VPS51-217ENST00000639871 KDM5DQ9BY66 1539 aa27.72■■■□□ 2.03
VPS51-217ENST00000639871 PZPP20742 1482 aa27.7■■■□□ 2.03
VPS51-217ENST00000639871 TCOF1Q13428 1488 aaKnown RBP27.7■■■□□ 2.03
VPS51-217ENST00000639871 LTBP4Q8N2S1 1624 aa27.7■■■□□ 2.02
VPS51-217ENST00000639871 WASHC2CQ9Y4E1 1318 aa27.68■■■□□ 2.02
VPS51-217ENST00000639871 A2ML1A8K2U0 1454 aa27.68■■■□□ 2.02
VPS51-217ENST00000639871 NCKAP5LQ9HCH0 1330 aa27.67■■■□□ 2.02
VPS51-217ENST00000639871 PKD2Q13563 968 aa27.67■■■□□ 2.02
VPS51-217ENST00000639871 FBXO31Q5XUX0 539 aaPredicted RBP27.67■■■□□ 2.02
VPS51-217ENST00000639871 TNRQ92752 1358 aa27.64■■■□□ 2.02
VPS51-217ENST00000639871 RNF17Q9BXT8 1623 aaKnown RBP27.63■■■□□ 2.01
VPS51-217ENST00000639871 DNMT1P26358 1616 aaKnown RBP27.62■■■□□ 2.01
VPS51-217ENST00000639871 EIF2AK4Q9P2K8 1649 aaKnown RBP27.6■■■□□ 2.01
VPS51-217ENST00000639871 ABCC5O15440 1437 aa27.6■■■□□ 2.01
VPS51-217ENST00000639871 APLP2Q06481 763 aa27.6■■■□□ 2.01
VPS51-217ENST00000639871 IQSEC2Q5JU85 1478 aa27.59■■■□□ 2.01
VPS51-217ENST00000639871 SHANK2Q9UPX8 1470 aa27.59■■■□□ 2.01
VPS51-217ENST00000639871 ABCC3O15438 1527 aa27.58■■■□□ 2.01
VPS51-217ENST00000639871 MROH1Q8NDA8 1641 aa27.57■■■□□ 2
VPS51-217ENST00000639871 DUOX2Q9NRD8 1548 aa27.57■■■□□ 2
VPS51-217ENST00000639871 FGD6Q6ZV73 1430 aa27.55■■■□□ 2
VPS51-217ENST00000639871 NLRP1Q9C000 1473 aa27.55■■■□□ 2
VPS51-217ENST00000639871 PTPN23Q9H3S7 1636 aa27.55■■■□□ 2
VPS51-217ENST00000639871 ZNF335Q9H4Z2 1342 aaPredicted RBP27.54■■■□□ 2
VPS51-217ENST00000639871 ZC3H13Q5T200 1668 aaKnown RBP27.52■■■□□ 2
VPS51-217ENST00000639871 KIF15Q9NS87 1388 aa27.52■■■□□ 2
VPS51-217ENST00000639871 DAPK1P53355 1430 aa27.51■■□□□ 1.99
VPS51-217ENST00000639871 SPATA31D1Q6ZQQ2 1576 aa27.5■■□□□ 1.99
VPS51-217ENST00000639871 ERBINQ96RT1 1412 aa27.5■■□□□ 1.99
VPS51-217ENST00000639871 CROCC2H7BZ55 1655 aa27.49■■□□□ 1.99
VPS51-217ENST00000639871 NEURL4Q96JN8 1562 aa27.48■■□□□ 1.99
VPS51-217ENST00000639871 THEMISQ8N1K5 641 aaPredicted RBP27.47■■□□□ 1.99
VPS51-217ENST00000639871 ERVK-7P63135 1459 aa27.46■■□□□ 1.99
VPS51-217ENST00000639871 RRP7BPQ9NSQ0 103 aa27.46■■□□□ 1.99
VPS51-217ENST00000639871 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.46■■□□□ 1.99
VPS51-217ENST00000639871 PRDM15P57071 1507 aaPredicted RBP27.46■■□□□ 1.99
VPS51-217ENST00000639871 UGGT1Q9NYU2 1555 aa27.45■■□□□ 1.99
VPS51-217ENST00000639871 ARHGAP31Q2M1Z3 1444 aa27.44■■□□□ 1.98
VPS51-217ENST00000639871 ANKLE2Q86XL3 938 aa27.43■■□□□ 1.98
VPS51-217ENST00000639871 MED14O60244 1454 aa27.42■■□□□ 1.98
VPS51-217ENST00000639871 POLR1AO95602 1720 aaPredicted RBP27.4■■□□□ 1.98
VPS51-217ENST00000639871 ANKRD30AQ9BXX3 1397 aa27.39■■□□□ 1.98
VPS51-217ENST00000639871 DEPDC5O75140 1603 aa27.38■■□□□ 1.97
VPS51-217ENST00000639871 CEP152O94986 1710 aa27.37■■□□□ 1.97
VPS51-217ENST00000639871 ADGRL2O95490 1459 aa27.35■■□□□ 1.97
VPS51-217ENST00000639871 NPHP4O75161 1426 aaPredicted RBP27.34■■□□□ 1.97
VPS51-217ENST00000639871 CHIC2Q9UKJ5 165 aa27.34■■□□□ 1.97
VPS51-217ENST00000639871 VWDEQ8N2E2 1590 aa27.33■■□□□ 1.97
VPS51-217ENST00000639871 LMTK2Q8IWU2 1503 aa27.32■■□□□ 1.96
VPS51-217ENST00000639871 CPS1P31327 1500 aa27.31■■□□□ 1.96
VPS51-217ENST00000639871 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.29■■□□□ 1.96
VPS51-217ENST00000639871 KANK1Q14678 1352 aa27.29■■□□□ 1.96
VPS51-217ENST00000639871 UBAP1LF5GYI3 381 aa27.28■■□□□ 1.96
VPS51-217ENST00000639871 ARHGAP23Q9P227 1491 aa27.27■■□□□ 1.96
VPS51-217ENST00000639871 UBR1Q8IWV7 1749 aa27.27■■□□□ 1.96
VPS51-217ENST00000639871 SLIT1O75093 1534 aa27.25■■□□□ 1.95
VPS51-217ENST00000639871 FAM50AQ14320 339 aaKnown RBP27.24■■□□□ 1.95
VPS51-217ENST00000639871 IQGAP1P46940 1657 aa27.24■■□□□ 1.95
VPS51-217ENST00000639871 SCAF11Q99590 1463 aaKnown RBP27.21■■□□□ 1.95
VPS51-217ENST00000639871 LTKP29376 864 aa27.21■■□□□ 1.95
VPS51-217ENST00000639871 ANKRD50Q9ULJ7 1429 aa27.21■■□□□ 1.95
VPS51-217ENST00000639871 NOS1P29475 1434 aa27.2■■□□□ 1.94
VPS51-217ENST00000639871 CFAP65Q6ZU64 1925 aaKnown RBP27.19■■□□□ 1.94
VPS51-217ENST00000639871 EFCAB6Q5THR3 1501 aa27.18■■□□□ 1.94
VPS51-217ENST00000639871 IDI1Q13907 227 aa27.17■■□□□ 1.94
VPS51-217ENST00000639871 TMEM2Q9UHN6 1383 aa27.17■■□□□ 1.94
VPS51-217ENST00000639871 TXNDC2Q86VQ3 553 aa27.16■■□□□ 1.94
VPS51-217ENST00000639871 PIK3C2BO00750 1634 aa27.16■■□□□ 1.94
VPS51-217ENST00000639871 KDM5AP29375 1690 aaKnown RBP27.14■■□□□ 1.94
VPS51-217ENST00000639871 SYNMO15061 1565 aa27.14■■□□□ 1.94
VPS51-217ENST00000639871 DISP3Q9P2K9 1392 aa27.13■■□□□ 1.93
VPS51-217ENST00000639871 TOM1O60784 492 aa27.13■■□□□ 1.93
VPS51-217ENST00000639871 RPRD2Q5VT52 1461 aaKnown RBP27.13■■□□□ 1.93
VPS51-217ENST00000639871 ROCK1Q13464 1354 aa27.12■■□□□ 1.93
VPS51-217ENST00000639871 LRRC7Q96NW7 1537 aa27.11■■□□□ 1.93
VPS51-217ENST00000639871 STRCP1A6NGW2 1772 aa27.11■■□□□ 1.93
VPS51-217ENST00000639871 ALKQ9UM73 1620 aa27.1■■□□□ 1.93
VPS51-217ENST00000639871 SLC52A1Q9NWF4 448 aa27.1■■□□□ 1.93
VPS51-217ENST00000639871 EID1Q9Y6B2 187 aa27.1■■□□□ 1.93
VPS51-217ENST00000639871 STAG3Q9UJ98 1225 aa27.06■■□□□ 1.92
VPS51-217ENST00000639871 ILDR2Q71H61 639 aa27.04■■□□□ 1.92
VPS51-217ENST00000639871 UNC13BO14795 1591 aa27.04■■□□□ 1.92
VPS51-217ENST00000639871 TET3O43151 1660 aa27.03■■□□□ 1.92
VPS51-217ENST00000639871 ADGRB3O60242 1522 aa27.03■■□□□ 1.92
VPS51-217ENST00000639871 HSPA1LP34931 641 aa27.02■■□□□ 1.92
VPS51-217ENST00000639871 PIP4K2BP78356 416 aa27.02■■□□□ 1.92
VPS51-217ENST00000639871 SCAF1Q9H7N4 1312 aaKnown RBP26.97■■□□□ 1.91
VPS51-217ENST00000639871 ZFYVE9O95405 1425 aa26.96■■□□□ 1.91
VPS51-217ENST00000639871 GCC2Q8IWJ2 1684 aa26.94■■□□□ 1.9
VPS51-217ENST00000639871 KCNA6P17658 529 aa26.93■■□□□ 1.9
VPS51-217ENST00000639871 PPARGC1BQ86YN6 1023 aaKnown RBP26.93■■□□□ 1.9
VPS51-217ENST00000639871 IQGAP3Q86VI3 1631 aa26.93■■□□□ 1.9
VPS51-217ENST00000639871 SLC26A8Q96RN1 970 aa26.91■■□□□ 1.9
VPS51-217ENST00000639871 TMEM131LA2VDJ0 1609 aa26.9■■□□□ 1.9
VPS51-217ENST00000639871 E9PCH4 1651 aa26.89■■□□□ 1.9
VPS51-217ENST00000639871 NUP155O75694 1391 aa26.89■■□□□ 1.9
VPS51-217ENST00000639871 PLEKHG1Q9ULL1 1385 aa26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms