RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 MAP3K4Q9Y6R4 1608 aa21.33■■□□□ 1
TRIM3-215ENST00000639856 POGZQ7Z3K3 1410 aa21.31■■□□□ 1
TRIM3-215ENST00000639856 KDM5CP41229 1560 aa21.29■■□□□ 1
TRIM3-215ENST00000639856 NBPF8Q3BBV2 869 aa21.28■■□□□ 1
TRIM3-215ENST00000639856 NEO1Q92859 1461 aa21.27■■□□□ 1
TRIM3-215ENST00000639856 GLI2P10070 1586 aa21.27■■□□□ 1
TRIM3-215ENST00000639856 DEPDC5O75140 1603 aa21.27■■□□□ 1
TRIM3-215ENST00000639856 DIP2BQ9P265 1576 aa21.26■□□□□ 0.99
TRIM3-215ENST00000639856 PLA2R1Q13018 1463 aa21.26■□□□□ 0.99
TRIM3-215ENST00000639856 DHX29Q7Z478 1369 aaKnown RBP21.24■□□□□ 0.99
TRIM3-215ENST00000639856 HECW2Q9P2P5 1572 aa21.24■□□□□ 0.99
TRIM3-215ENST00000639856 EIF2AK4Q9P2K8 1649 aaKnown RBP21.23■□□□□ 0.99
TRIM3-215ENST00000639856 RAPGEF3O95398 923 aa21.22■□□□□ 0.99
TRIM3-215ENST00000639856 FAM69CQ0P6D2 419 aa21.22■□□□□ 0.99
TRIM3-215ENST00000639856 KIF3BO15066 747 aa21.22■□□□□ 0.99
TRIM3-215ENST00000639856 MLH3Q9UHC1 1453 aa21.21■□□□□ 0.99
TRIM3-215ENST00000639856 E9PCH4 1651 aa21.21■□□□□ 0.99
TRIM3-215ENST00000639856 MROH1Q8NDA8 1641 aa21.21■□□□□ 0.99
TRIM3-215ENST00000639856 CCDC144AA2RUR9 1427 aa21.21■□□□□ 0.99
TRIM3-215ENST00000639856 ABCA6Q8N139 1617 aa21.19■□□□□ 0.98
TRIM3-215ENST00000639856 RICTORQ6R327 1708 aa21.19■□□□□ 0.98
TRIM3-215ENST00000639856 TSPOAP1O95153 1857 aa21.19■□□□□ 0.98
TRIM3-215ENST00000639856 VWDEQ8N2E2 1590 aa21.19■□□□□ 0.98
TRIM3-215ENST00000639856 A2MP01023 1474 aa21.19■□□□□ 0.98
TRIM3-215ENST00000639856 FRMPD1Q5SYB0 1578 aa21.18■□□□□ 0.98
TRIM3-215ENST00000639856 PRDM15P57071 1507 aaPredicted RBP21.18■□□□□ 0.98
TRIM3-215ENST00000639856 HSPA5P11021 654 aaKnown RBP21.17■□□□□ 0.98
TRIM3-215ENST00000639856 ZNF326Q5BKZ1 582 aaKnown RBP21.17■□□□□ 0.98
TRIM3-215ENST00000639856 ANP32CO43423 234 aa21.17■□□□□ 0.98
TRIM3-215ENST00000639856 EIF4G2P78344 907 aaKnown RBP eCLIP21.17■□□□□ 0.98
TRIM3-215ENST00000639856 TET3O43151 1660 aa21.16■□□□□ 0.98
TRIM3-215ENST00000639856 ATP10AO60312 1499 aa21.16■□□□□ 0.98
TRIM3-215ENST00000639856 PPRC1Q5VV67 1664 aaKnown RBP21.16■□□□□ 0.98
TRIM3-215ENST00000639856 CCER2I3L3R5 266 aa21.15■□□□□ 0.98
TRIM3-215ENST00000639856 KANK1Q14678 1352 aa21.14■□□□□ 0.97
TRIM3-215ENST00000639856 KDM2AQ9Y2K7 1162 aa21.12■□□□□ 0.97
TRIM3-215ENST00000639856 RNF17Q9BXT8 1623 aaKnown RBP21.12■□□□□ 0.97
TRIM3-215ENST00000639856 UHRF1BP1Q6BDS2 1440 aa21.11■□□□□ 0.97
TRIM3-215ENST00000639856 PELP1Q8IZL8 1130 aaKnown RBP21.11■□□□□ 0.97
TRIM3-215ENST00000639856 DCAF11Q8TEB1 546 aa21.11■□□□□ 0.97
TRIM3-215ENST00000639856 SPHKAPQ2M3C7 1700 aa21.11■□□□□ 0.97
TRIM3-215ENST00000639856 DIP2CQ9Y2E4 1556 aa21.11■□□□□ 0.97
TRIM3-215ENST00000639856 WASHC2AQ641Q2 1341 aa21.1■□□□□ 0.97
TRIM3-215ENST00000639856 RGL3Q3MIN7 710 aa21.1■□□□□ 0.97
TRIM3-215ENST00000639856 KIF13AQ9H1H9 1805 aa21.09■□□□□ 0.97
TRIM3-215ENST00000639856 CEP152O94986 1710 aa21.09■□□□□ 0.97
TRIM3-215ENST00000639856 TRPM2O94759 1503 aa21.08■□□□□ 0.97
TRIM3-215ENST00000639856 YEATS2Q9ULM3 1422 aa21.08■□□□□ 0.96
TRIM3-215ENST00000639856 PTPRTO14522 1441 aa21.07■□□□□ 0.96
TRIM3-215ENST00000639856 SPATA31E1Q6ZUB1 1445 aa21.07■□□□□ 0.96
TRIM3-215ENST00000639856 BCORL1Q5H9F3 1711 aa21.07■□□□□ 0.96
TRIM3-215ENST00000639856 EFCAB6Q5THR3 1501 aa21.06■□□□□ 0.96
TRIM3-215ENST00000639856 RALGAPBQ86X10 1494 aa21.06■□□□□ 0.96
TRIM3-215ENST00000639856 CLTCL1P53675 1640 aa21.05■□□□□ 0.96
TRIM3-215ENST00000639856 POLR1AO95602 1720 aaPredicted RBP21.04■□□□□ 0.96
TRIM3-215ENST00000639856 GGT6Q6P531 493 aa21.04■□□□□ 0.96
TRIM3-215ENST00000639856 LMTK2Q8IWU2 1503 aa21.03■□□□□ 0.96
TRIM3-215ENST00000639856 ZMYM4Q5VZL5 1548 aa21.02■□□□□ 0.96
TRIM3-215ENST00000639856 PRAG1Q86YV5 1406 aa21.02■□□□□ 0.96
TRIM3-215ENST00000639856 USP47Q96K76 1375 aa21.01■□□□□ 0.95
TRIM3-215ENST00000639856 C11orf95C9JLR9 678 aaPredicted RBP21.01■□□□□ 0.95
TRIM3-215ENST00000639856 UGGT1Q9NYU2 1555 aa21■□□□□ 0.95
TRIM3-215ENST00000639856 CCDC7Q96M83 1385 aa21■□□□□ 0.95
TRIM3-215ENST00000639856 TRPM1Q7Z4N2 1603 aa20.99■□□□□ 0.95
TRIM3-215ENST00000639856 CNTLNQ9NXG0 1405 aa20.99■□□□□ 0.95
TRIM3-215ENST00000639856 ABCC3O15438 1527 aa20.98■□□□□ 0.95
TRIM3-215ENST00000639856 CFAP65Q6ZU64 1925 aaKnown RBP20.97■□□□□ 0.95
TRIM3-215ENST00000639856 CARD11Q9BXL7 1154 aa20.96■□□□□ 0.95
TRIM3-215ENST00000639856 NPATQ14207 1427 aa20.95■□□□□ 0.94
TRIM3-215ENST00000639856 ROCK2O75116 1388 aaKnown RBP20.95■□□□□ 0.94
TRIM3-215ENST00000639856 WASHC2CQ9Y4E1 1318 aa20.94■□□□□ 0.94
TRIM3-215ENST00000639856 COL17A1Q9UMD9 1497 aaPredicted RBP20.94■□□□□ 0.94
TRIM3-215ENST00000639856 CAMSAP1Q5T5Y3 1602 aa20.94■□□□□ 0.94
TRIM3-215ENST00000639856 NBPF1Q3BBV0 1214 aa20.92■□□□□ 0.94
TRIM3-215ENST00000639856 KIF7Q2M1P5 1343 aa20.91■□□□□ 0.94
TRIM3-215ENST00000639856 KIF1BO60333 1816 aa20.9■□□□□ 0.94
TRIM3-215ENST00000639856 MADDQ8WXG6 1647 aa20.9■□□□□ 0.94
TRIM3-215ENST00000639856 SIGLEC1Q9BZZ2 1709 aa20.9■□□□□ 0.94
TRIM3-215ENST00000639856 MROH2AA6NES4 1674 aa20.89■□□□□ 0.94
TRIM3-215ENST00000639856 SUPT16HQ9Y5B9 1047 aaKnown RBP20.87■□□□□ 0.93
TRIM3-215ENST00000639856 ZC3H13Q5T200 1668 aaKnown RBP20.87■□□□□ 0.93
TRIM3-215ENST00000639856 GPRASP1Q5JY77 1395 aa20.86■□□□□ 0.93
TRIM3-215ENST00000639856 NEURL4Q96JN8 1562 aa20.86■□□□□ 0.93
TRIM3-215ENST00000639856 ST20-MTHFSA0A0A6YYL1 179 aa20.86■□□□□ 0.93
TRIM3-215ENST00000639856 LAMC1P11047 1609 aa20.84■□□□□ 0.93
TRIM3-215ENST00000639856 REREQ9P2R6 1566 aa20.84■□□□□ 0.93
TRIM3-215ENST00000639856 ADGRB3O60242 1522 aa20.82■□□□□ 0.92
TRIM3-215ENST00000639856 PRKRIP1Q9H875 184 aaPredicted RBP20.82■□□□□ 0.92
TRIM3-215ENST00000639856 ARHGEF40Q8TER5 1519 aa20.82■□□□□ 0.92
TRIM3-215ENST00000639856 SYNMO15061 1565 aa20.82■□□□□ 0.92
TRIM3-215ENST00000639856 IFT172Q9UG01 1749 aa20.82■□□□□ 0.92
TRIM3-215ENST00000639856 NOS1P29475 1434 aa20.81■□□□□ 0.92
TRIM3-215ENST00000639856 ARID4BQ4LE39 1312 aaPredicted RBP20.81■□□□□ 0.92
TRIM3-215ENST00000639856 AGLP35573 1532 aa20.8■□□□□ 0.92
TRIM3-215ENST00000639856 ARHGAP31Q2M1Z3 1444 aa20.8■□□□□ 0.92
TRIM3-215ENST00000639856 POLR3GLQ9BT43 218 aa20.79■□□□□ 0.92
TRIM3-215ENST00000639856 CHGAP10645 457 aaKnown RBP20.78■□□□□ 0.92
TRIM3-215ENST00000639856 PIK3C2BO00750 1634 aa20.78■□□□□ 0.92
TRIM3-215ENST00000639856 MYOM2P54296 1465 aa20.77■□□□□ 0.92
TRIM3-215ENST00000639856 STAC3Q96MF2 364 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms