RNA–Protein interactions for RNA: ENST00000639595.1

NECAP1-218, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-218ENST00000639595 POLR1AO95602 1720 aaPredicted RBP11.9□□□□□ -0.5
NECAP1-218ENST00000639595 CCDC144AA2RUR9 1427 aa11.9□□□□□ -0.5
NECAP1-218ENST00000639595 TRAPPC8Q9Y2L5 1435 aa11.9□□□□□ -0.5
NECAP1-218ENST00000639595 ZNF326Q5BKZ1 582 aaKnown RBP11.9□□□□□ -0.5
NECAP1-218ENST00000639595 DCAF11Q8TEB1 546 aa11.9□□□□□ -0.5
NECAP1-218ENST00000639595 IQGAP3Q86VI3 1631 aa11.89□□□□□ -0.51
NECAP1-218ENST00000639595 CARD11Q9BXL7 1154 aa11.89□□□□□ -0.51
NECAP1-218ENST00000639595 SENP3Q9H4L4 574 aaPredicted RBP11.89□□□□□ -0.51
NECAP1-218ENST00000639595 WDR7Q9Y4E6 1490 aa11.89□□□□□ -0.51
NECAP1-218ENST00000639595 DHX29Q7Z478 1369 aaKnown RBP11.88□□□□□ -0.51
NECAP1-218ENST00000639595 ROCK2O75116 1388 aaKnown RBP11.87□□□□□ -0.51
NECAP1-218ENST00000639595 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.87□□□□□ -0.51
NECAP1-218ENST00000639595 KDM2AQ9Y2K7 1162 aa11.87□□□□□ -0.51
NECAP1-218ENST00000639595 BCORL1Q5H9F3 1711 aa11.87□□□□□ -0.51
NECAP1-218ENST00000639595 PRAG1Q86YV5 1406 aa11.86□□□□□ -0.51
NECAP1-218ENST00000639595 CCDC184Q52MB2 194 aa11.86□□□□□ -0.51
NECAP1-218ENST00000639595 SPAG9O60271 1321 aaKnown RBP11.86□□□□□ -0.51
NECAP1-218ENST00000639595 GPRASP1Q5JY77 1395 aa11.85□□□□□ -0.51
NECAP1-218ENST00000639595 AFAP1Q8N556 730 aa11.85□□□□□ -0.51
NECAP1-218ENST00000639595 ST20-MTHFSA0A0A6YYL1 179 aa11.84□□□□□ -0.51
NECAP1-218ENST00000639595 HNRNPUQ00839 825 aaKnown RBP eCLIP11.84□□□□□ -0.51
NECAP1-218ENST00000639595 A2MP01023 1474 aa11.83□□□□□ -0.52
NECAP1-218ENST00000639595 MRS2Q9HD23 443 aa11.82□□□□□ -0.52
NECAP1-218ENST00000639595 ZFYVE16Q7Z3T8 1539 aa11.82□□□□□ -0.52
NECAP1-218ENST00000639595 ABCA9Q8IUA7 1624 aa11.82□□□□□ -0.52
NECAP1-218ENST00000639595 FANCAO15360 1455 aa11.82□□□□□ -0.52
NECAP1-218ENST00000639595 FKBP8Q14318 412 aa11.81□□□□□ -0.52
NECAP1-218ENST00000639595 RGL3Q3MIN7 710 aa11.81□□□□□ -0.52
NECAP1-218ENST00000639595 OSCARQ8IYS5 282 aa11.81□□□□□ -0.52
NECAP1-218ENST00000639595 ASXL2Q76L83 1435 aa11.81□□□□□ -0.52
NECAP1-218ENST00000639595 PTPRTO14522 1441 aa11.8□□□□□ -0.52
NECAP1-218ENST00000639595 TRPM1Q7Z4N2 1603 aa11.8□□□□□ -0.52
NECAP1-218ENST00000639595 STAC3Q96MF2 364 aa11.79□□□□□ -0.52
NECAP1-218ENST00000639595 NEFLP07196 543 aa11.79□□□□□ -0.52
NECAP1-218ENST00000639595 NBPF1Q3BBV0 1214 aa11.79□□□□□ -0.52
NECAP1-218ENST00000639595 ERICH6Q7L0X2 663 aa11.79□□□□□ -0.52
NECAP1-218ENST00000639595 KTN1Q86UP2 1357 aaKnown RBP11.78□□□□□ -0.52
NECAP1-218ENST00000639595 SCAPERQ9BY12 1400 aa11.78□□□□□ -0.52
NECAP1-218ENST00000639595 LAMC1P11047 1609 aa11.78□□□□□ -0.52
NECAP1-218ENST00000639595 ZBED9Q6R2W3 1325 aa11.78□□□□□ -0.52
NECAP1-218ENST00000639595 INO80Q9ULG1 1556 aaPredicted RBP11.78□□□□□ -0.52
NECAP1-218ENST00000639595 DEPDC5O75140 1603 aa11.77□□□□□ -0.53
NECAP1-218ENST00000639595 ADGRL1O94910 1474 aa11.77□□□□□ -0.53
NECAP1-218ENST00000639595 FAM9BQ8IZU0 186 aa11.77□□□□□ -0.53
NECAP1-218ENST00000639595 ATP7AQ04656 1500 aa11.77□□□□□ -0.53
NECAP1-218ENST00000639595 VWDEQ8N2E2 1590 aa11.77□□□□□ -0.53
NECAP1-218ENST00000639595 PRKCSHP14314 528 aaPredicted RBP11.76□□□□□ -0.53
NECAP1-218ENST00000639595 TESK2Q96S53 571 aa11.76□□□□□ -0.53
NECAP1-218ENST00000639595 POLR3GLQ9BT43 218 aa11.76□□□□□ -0.53
NECAP1-218ENST00000639595 TRPM2O94759 1503 aa11.76□□□□□ -0.53
NECAP1-218ENST00000639595 PRDM15P57071 1507 aaPredicted RBP11.76□□□□□ -0.53
NECAP1-218ENST00000639595 EIF2AK4Q9P2K8 1649 aaKnown RBP11.76□□□□□ -0.53
NECAP1-218ENST00000639595 NPM1P06748 294 aaKnown RBP eCLIP11.74□□□□□ -0.53
NECAP1-218ENST00000639595 RALBP1Q15311 655 aa11.74□□□□□ -0.53
NECAP1-218ENST00000639595 KANK1Q14678 1352 aa11.74□□□□□ -0.53
NECAP1-218ENST00000639595 E9PCH4 1651 aa11.74□□□□□ -0.53
NECAP1-218ENST00000639595 PNISRQ8TF01 805 aaKnown RBP11.73□□□□□ -0.53
NECAP1-218ENST00000639595 WASHC2CQ9Y4E1 1318 aa11.73□□□□□ -0.53
NECAP1-218ENST00000639595 KIF3BO15066 747 aa11.73□□□□□ -0.53
NECAP1-218ENST00000639595 PER1O15534 1290 aaPredicted RBP11.73□□□□□ -0.53
NECAP1-218ENST00000639595 NEURL4Q96JN8 1562 aa11.72□□□□□ -0.53
NECAP1-218ENST00000639595 COL17A1Q9UMD9 1497 aaPredicted RBP11.72□□□□□ -0.53
NECAP1-218ENST00000639595 TET3O43151 1660 aa11.72□□□□□ -0.53
NECAP1-218ENST00000639595 NCBP3Q53F19 620 aaKnown RBP11.72□□□□□ -0.53
NECAP1-218ENST00000639595 ERICH6BQ5W0A0 696 aa11.72□□□□□ -0.53
NECAP1-218ENST00000639595 ZNF518AQ6AHZ1 1483 aa11.71□□□□□ -0.53
NECAP1-218ENST00000639595 BRD4O60885 1362 aaPredicted RBP11.71□□□□□ -0.53
NECAP1-218ENST00000639595 MYBBP1AQ9BQG0 1328 aaKnown RBP11.71□□□□□ -0.54
NECAP1-218ENST00000639595 BCANQ96GW7 911 aa11.71□□□□□ -0.54
NECAP1-218ENST00000639595 CD109Q6YHK3 1445 aa11.7□□□□□ -0.54
NECAP1-218ENST00000639595 TMC1Q8TDI8 760 aa11.7□□□□□ -0.54
NECAP1-218ENST00000639595 MROH1Q8NDA8 1641 aa11.69□□□□□ -0.54
NECAP1-218ENST00000639595 RNF17Q9BXT8 1623 aaKnown RBP11.69□□□□□ -0.54
NECAP1-218ENST00000639595 TMF1P82094 1093 aa11.69□□□□□ -0.54
NECAP1-218ENST00000639595 LRPPRCP42704 1394 aaKnown RBP11.69□□□□□ -0.54
NECAP1-218ENST00000639595 PARD3Q8TEW0 1356 aa11.69□□□□□ -0.54
NECAP1-218ENST00000639595 DISP3Q9P2K9 1392 aa11.69□□□□□ -0.54
NECAP1-218ENST00000639595 LMTK2Q8IWU2 1503 aa11.69□□□□□ -0.54
NECAP1-218ENST00000639595 SPHKAPQ2M3C7 1700 aa11.68□□□□□ -0.54
NECAP1-218ENST00000639595 TSHZ2Q9NRE2 1034 aa11.68□□□□□ -0.54
NECAP1-218ENST00000639595 MLH3Q9UHC1 1453 aa11.68□□□□□ -0.54
NECAP1-218ENST00000639595 CLTCL1P53675 1640 aa11.68□□□□□ -0.54
NECAP1-218ENST00000639595 MADDQ8WXG6 1647 aa11.68□□□□□ -0.54
NECAP1-218ENST00000639595 KIDINS220Q9ULH0 1771 aa11.68□□□□□ -0.54
NECAP1-218ENST00000639595 MYT1LQ9UL68 1186 aa11.67□□□□□ -0.54
NECAP1-218ENST00000639595 POGZQ7Z3K3 1410 aa11.67□□□□□ -0.54
NECAP1-218ENST00000639595 CEP152O94986 1710 aa11.66□□□□□ -0.54
NECAP1-218ENST00000639595 NLRP13Q86W25 1043 aa11.66□□□□□ -0.54
NECAP1-218ENST00000639595 SMG6Q86US8 1419 aaKnown RBP11.66□□□□□ -0.54
NECAP1-218ENST00000639595 SCAF11Q99590 1463 aaKnown RBP11.65□□□□□ -0.54
NECAP1-218ENST00000639595 EFCAB6Q5THR3 1501 aa11.65□□□□□ -0.54
NECAP1-218ENST00000639595 CFAP74Q9C0B2 1584 aa11.65□□□□□ -0.54
NECAP1-218ENST00000639595 CNGB1Q14028 1251 aaPredicted RBP11.64□□□□□ -0.55
NECAP1-218ENST00000639595 PANK3Q9H999 370 aa11.64□□□□□ -0.55
NECAP1-218ENST00000639595 NEO1Q92859 1461 aa11.64□□□□□ -0.55
NECAP1-218ENST00000639595 MYOM2P54296 1465 aa11.63□□□□□ -0.55
NECAP1-218ENST00000639595 CDCA8Q53HL2 280 aa11.63□□□□□ -0.55
NECAP1-218ENST00000639595 INSRP06213 1382 aa11.63□□□□□ -0.55
NECAP1-218ENST00000639595 IQGAP1P46940 1657 aa11.62□□□□□ -0.55
NECAP1-218ENST00000639595 NUDCQ9Y266 331 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms