RNA–Protein interactions for RNA: ENST00000639486.1

KCNMA1-261, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 8,850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-261ENST00000639486 CHMP7Q8WUX9 453 aaPredicted RBP20.37■□□□□ 0.85
KCNMA1-261ENST00000639486 SMC4Q9NTJ3 1288 aa20.37■□□□□ 0.85
KCNMA1-261ENST00000639486 IPO7O95373 1038 aaKnown RBP20.36■□□□□ 0.85
KCNMA1-261ENST00000639486 RDXP35241 583 aaKnown RBP20.36■□□□□ 0.85
KCNMA1-261ENST00000639486 HSP90B2PQ58FF3 399 aa20.36■□□□□ 0.85
KCNMA1-261ENST00000639486 DIAPH3Q9NSV4 1193 aa20.36■□□□□ 0.85
KCNMA1-261ENST00000639486 PDE4AP27815 886 aa20.35■□□□□ 0.85
KCNMA1-261ENST00000639486 HOMER1Q86YM7 354 aa20.35■□□□□ 0.85
KCNMA1-261ENST00000639486 CENPJQ9HC77 1338 aaPredicted RBP20.35■□□□□ 0.85
KCNMA1-261ENST00000639486 CDR1P51861 262 aa20.34■□□□□ 0.85
KCNMA1-261ENST00000639486 SPAG9O60271 1321 aaKnown RBP20.34■□□□□ 0.85
KCNMA1-261ENST00000639486 WRNQ14191 1432 aaPredicted RBP eCLIP20.33■□□□□ 0.85
KCNMA1-261ENST00000639486 PDE4CQ08493 712 aa20.33■□□□□ 0.84
KCNMA1-261ENST00000639486 HSPA5P11021 654 aaKnown RBP20.33■□□□□ 0.84
KCNMA1-261ENST00000639486 CCDC191Q8NCU4 936 aa20.32■□□□□ 0.84
KCNMA1-261ENST00000639486 HOOK1Q9UJC3 728 aaKnown RBP20.31■□□□□ 0.84
KCNMA1-261ENST00000639486 SRPK2P78362 688 aaKnown RBP20.3■□□□□ 0.84
KCNMA1-261ENST00000639486 NOL8Q76FK4 1167 aaKnown RBP20.3■□□□□ 0.84
KCNMA1-261ENST00000639486 DCTN1Q14203 1278 aa20.3■□□□□ 0.84
KCNMA1-261ENST00000639486 FOXD4L5Q5VV16 416 aaPredicted RBP20.3■□□□□ 0.84
KCNMA1-261ENST00000639486 ANKRD20A12PQ8NF67 263 aa20.3■□□□□ 0.84
KCNMA1-261ENST00000639486 FOXD4L4Q8WXT5 416 aaPredicted RBP20.3■□□□□ 0.84
KCNMA1-261ENST00000639486 PODXL2Q9NZ53 605 aa20.29■□□□□ 0.84
KCNMA1-261ENST00000639486 H0YHG0 523 aa20.28■□□□□ 0.84
KCNMA1-261ENST00000639486 GORABQ5T7V8 394 aa20.28■□□□□ 0.84
KCNMA1-261ENST00000639486 STK31Q9BXU1 1019 aa20.27■□□□□ 0.84
KCNMA1-261ENST00000639486 CCDC39Q9UFE4 941 aa20.27■□□□□ 0.84
KCNMA1-261ENST00000639486 ZBED9Q6R2W3 1325 aa20.27■□□□□ 0.84
KCNMA1-261ENST00000639486 FAM184AQ8NB25 1140 aa20.27■□□□□ 0.84
KCNMA1-261ENST00000639486 NASPP49321 788 aaPredicted RBP20.27■□□□□ 0.83
KCNMA1-261ENST00000639486 TAF3Q5VWG9 929 aa20.26■□□□□ 0.83
KCNMA1-261ENST00000639486 U2AF1L5P0DN76 240 aaPredicted RBP20.26■□□□□ 0.83
KCNMA1-261ENST00000639486 U2AF1Q01081 240 aaKnown RBP eCLIP20.26■□□□□ 0.83
KCNMA1-261ENST00000639486 KIF15Q9NS87 1388 aa20.26■□□□□ 0.83
KCNMA1-261ENST00000639486 IFT57Q9NWB7 429 aa20.25■□□□□ 0.83
KCNMA1-261ENST00000639486 LMOD2Q6P5Q4 547 aa20.24■□□□□ 0.83
KCNMA1-261ENST00000639486 REC8O95072 547 aa20.24■□□□□ 0.83
KCNMA1-261ENST00000639486 KCNH8Q96L42 1107 aa20.24■□□□□ 0.83
KCNMA1-261ENST00000639486 MNS1Q8NEH6 495 aa20.23■□□□□ 0.83
KCNMA1-261ENST00000639486 NLRP13Q86W25 1043 aa20.22■□□□□ 0.83
KCNMA1-261ENST00000639486 MRE11P49959 708 aa20.21■□□□□ 0.83
KCNMA1-261ENST00000639486 HDGFL2Q7Z4V5 671 aaPredicted RBP20.21■□□□□ 0.83
KCNMA1-261ENST00000639486 CHMP5Q9NZZ3 219 aa20.21■□□□□ 0.83
KCNMA1-261ENST00000639486 VPS8Q8N3P4 1428 aa20.21■□□□□ 0.83
KCNMA1-261ENST00000639486 LEKR1Q6ZMV7 388 aa20.21■□□□□ 0.83
KCNMA1-261ENST00000639486 HMGN5P82970 282 aaKnown RBP20.21■□□□□ 0.83
KCNMA1-261ENST00000639486 BAZ1AQ9NRL2 1556 aaPredicted RBP20.21■□□□□ 0.83
KCNMA1-261ENST00000639486 ERCC4Q92889 916 aaPredicted RBP20.2■□□□□ 0.82
KCNMA1-261ENST00000639486 NAT10Q9H0A0 1025 aaKnown RBP20.2■□□□□ 0.82
KCNMA1-261ENST00000639486 NUCB2P80303 420 aa20.19■□□□□ 0.82
KCNMA1-261ENST00000639486 LMOD3Q0VAK6 560 aa20.18■□□□□ 0.82
KCNMA1-261ENST00000639486 CGNL1Q0VF96 1302 aa20.18■□□□□ 0.82
KCNMA1-261ENST00000639486 TAF7LQ5H9L4 462 aa20.18■□□□□ 0.82
KCNMA1-261ENST00000639486 SASS6Q6UVJ0 657 aa20.18■□□□□ 0.82
KCNMA1-261ENST00000639486 RRP9O43818 475 aaKnown RBP20.18■□□□□ 0.82
KCNMA1-261ENST00000639486 EIF4G1Q04637 1599 aaKnown RBP20.18■□□□□ 0.82
KCNMA1-261ENST00000639486 RAB3GAP2Q9H2M9 1393 aa20.18■□□□□ 0.82
KCNMA1-261ENST00000639486 RRP1P56182 461 aaKnown RBP20.17■□□□□ 0.82
KCNMA1-261ENST00000639486 SLC4A3P48751 1232 aa20.17■□□□□ 0.82
KCNMA1-261ENST00000639486 FOXD4L6Q3SYB3 417 aaPredicted RBP20.17■□□□□ 0.82
KCNMA1-261ENST00000639486 FOXD4L3Q6VB84 417 aaPredicted RBP20.17■□□□□ 0.82
KCNMA1-261ENST00000639486 CHMP3Q9Y3E7 222 aa20.17■□□□□ 0.82
KCNMA1-261ENST00000639486 MCTP1Q6DN14 999 aa20.16■□□□□ 0.82
KCNMA1-261ENST00000639486 R3HCC1Q9Y3T6 440 aaKnown RBP20.16■□□□□ 0.82
KCNMA1-261ENST00000639486 MYO6Q9UM54 1294 aa20.15■□□□□ 0.82
KCNMA1-261ENST00000639486 BAZ1BQ9UIG0 1483 aaKnown RBP20.15■□□□□ 0.82
KCNMA1-261ENST00000639486 PCMTD1Q96MG8 357 aaPredicted RBP20.14■□□□□ 0.82
KCNMA1-261ENST00000639486 AKAP17AQ02040 695 aaKnown RBP20.14■□□□□ 0.81
KCNMA1-261ENST00000639486 LRRFIP1Q32MZ4 808 aaKnown RBP20.14■□□□□ 0.81
KCNMA1-261ENST00000639486 HDGFP51858 240 aaKnown RBP20.14■□□□□ 0.81
KCNMA1-261ENST00000639486 ANKRD45Q5TZF3 282 aa20.13■□□□□ 0.81
KCNMA1-261ENST00000639486 CCP110O43303 1012 aa20.13■□□□□ 0.81
KCNMA1-261ENST00000639486 MYBBP1AQ9BQG0 1328 aaKnown RBP20.12■□□□□ 0.81
KCNMA1-261ENST00000639486 RILPL2Q969X0 211 aa20.12■□□□□ 0.81
KCNMA1-261ENST00000639486 CLUAP1Q96AJ1 413 aa20.12■□□□□ 0.81
KCNMA1-261ENST00000639486 NFKBIBQ15653 356 aa20.12■□□□□ 0.81
KCNMA1-261ENST00000639486 MARCH6O60337 910 aa20.12■□□□□ 0.81
KCNMA1-261ENST00000639486 LETM1O95202 739 aaPredicted RBP20.12■□□□□ 0.81
KCNMA1-261ENST00000639486 SLC4A10Q6U841 1118 aa20.11■□□□□ 0.81
KCNMA1-261ENST00000639486 ROCK1Q13464 1354 aa20.1■□□□□ 0.81
KCNMA1-261ENST00000639486 BICD2Q8TD16 824 aa20.1■□□□□ 0.81
KCNMA1-261ENST00000639486 RUFY2Q8WXA3 655 aa20.1■□□□□ 0.81
KCNMA1-261ENST00000639486 TRIM29Q14134 588 aa20.09■□□□□ 0.81
KCNMA1-261ENST00000639486 SOX12O15370 315 aa20.09■□□□□ 0.81
KCNMA1-261ENST00000639486 ZKSCAN1P17029 563 aaPredicted RBP20.09■□□□□ 0.81
KCNMA1-261ENST00000639486 CCDC173Q0VFZ6 552 aa20.09■□□□□ 0.81
KCNMA1-261ENST00000639486 CCDC47Q96A33 483 aaKnown RBP20.08■□□□□ 0.81
KCNMA1-261ENST00000639486 VPS53Q5VIR6 699 aa20.08■□□□□ 0.81
KCNMA1-261ENST00000639486 FMN1Q68DA7 1419 aa20.08■□□□□ 0.81
KCNMA1-261ENST00000639486 CPLX2Q6PUV4 134 aaKnown RBP20.08■□□□□ 0.8
KCNMA1-261ENST00000639486 E9PSI1 815 aa20.07■□□□□ 0.8
KCNMA1-261ENST00000639486 USP8P40818 1118 aa20.07■□□□□ 0.8
KCNMA1-261ENST00000639486 TMX4Q9H1E5 349 aaPredicted RBP20.06■□□□□ 0.8
KCNMA1-261ENST00000639486 CAGE1Q8TC20 777 aa20.06■□□□□ 0.8
KCNMA1-261ENST00000639486 CCDC146Q8IYE0 955 aa20.05■□□□□ 0.8
KCNMA1-261ENST00000639486 DEF6Q9H4E7 631 aa20.05■□□□□ 0.8
KCNMA1-261ENST00000639486 SYNE3Q6ZMZ3 975 aa20.04■□□□□ 0.8
KCNMA1-261ENST00000639486 NAP1L1P55209 391 aaKnown RBP20.04■□□□□ 0.8
KCNMA1-261ENST00000639486 KIAA0754O94854 1291 aa20.04■□□□□ 0.8
KCNMA1-261ENST00000639486 HSP90AB3PQ58FF7 597 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms