RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 NPHP4O75161 1426 aaPredicted RBP6.7□□□□□ -1.34
CCDC7-213ENST00000639290 ABCC3O15438 1527 aa6.7□□□□□ -1.34
CCDC7-213ENST00000639290 PRELPP51888 382 aa6.7□□□□□ -1.34
CCDC7-213ENST00000639290 ZNF518AQ6AHZ1 1483 aa6.7□□□□□ -1.34
CCDC7-213ENST00000639290 UNC13BO14795 1591 aa6.69□□□□□ -1.34
CCDC7-213ENST00000639290 TTBK1Q5TCY1 1321 aaPredicted RBP6.68□□□□□ -1.34
CCDC7-213ENST00000639290 FAM9AQ8IZU1 332 aaPredicted RBP6.68□□□□□ -1.34
CCDC7-213ENST00000639290 NGLY1Q96IV0 654 aa6.68□□□□□ -1.34
CCDC7-213ENST00000639290 XIRP1Q702N8 1843 aaKnown RBP6.68□□□□□ -1.34
CCDC7-213ENST00000639290 MLH3Q9UHC1 1453 aa6.67□□□□□ -1.34
CCDC7-213ENST00000639290 BLMP54132 1417 aaPredicted RBP6.67□□□□□ -1.34
CCDC7-213ENST00000639290 MEX3CQ5U5Q3 659 aaKnown RBP6.67□□□□□ -1.34
CCDC7-213ENST00000639290 FAM135AQ9P2D6 1515 aa6.67□□□□□ -1.34
CCDC7-213ENST00000639290 ATP7AQ04656 1500 aa6.67□□□□□ -1.34
CCDC7-213ENST00000639290 ZMYM3Q14202 1370 aa6.66□□□□□ -1.34
CCDC7-213ENST00000639290 ARHGAP23Q9P227 1491 aa6.66□□□□□ -1.34
CCDC7-213ENST00000639290 AHDC1Q5TGY3 1603 aaPredicted RBP6.66□□□□□ -1.34
CCDC7-213ENST00000639290 C1QBPQ07021 282 aaKnown RBP6.66□□□□□ -1.34
CCDC7-213ENST00000639290 ZNF784Q8NCA9 323 aaPredicted RBP6.66□□□□□ -1.34
CCDC7-213ENST00000639290 SCAPERQ9BY12 1400 aa6.65□□□□□ -1.34
CCDC7-213ENST00000639290 NINLQ9Y2I6 1382 aa6.65□□□□□ -1.34
CCDC7-213ENST00000639290 SPHKAPQ2M3C7 1700 aa6.65□□□□□ -1.34
CCDC7-213ENST00000639290 KIF27Q86VH2 1401 aa6.65□□□□□ -1.34
CCDC7-213ENST00000639290 NUTM2BA6NNL0 878 aaPredicted RBP6.65□□□□□ -1.34
CCDC7-213ENST00000639290 NUTM2EB1AL46 878 aaPredicted RBP6.65□□□□□ -1.34
CCDC7-213ENST00000639290 NUTM2DQ5VT03 806 aaPredicted RBP6.65□□□□□ -1.34
CCDC7-213ENST00000639290 ANKLE2Q86XL3 938 aa6.65□□□□□ -1.34
CCDC7-213ENST00000639290 NUTM2AQ8IVF1 878 aaPredicted RBP6.65□□□□□ -1.34
CCDC7-213ENST00000639290 HRCP23327 699 aa6.64□□□□□ -1.35
CCDC7-213ENST00000639290 ZC3H13Q5T200 1668 aaKnown RBP6.64□□□□□ -1.35
CCDC7-213ENST00000639290 ABCA6Q8N139 1617 aa6.64□□□□□ -1.35
CCDC7-213ENST00000639290 CARMIL1Q5VZK9 1371 aa6.63□□□□□ -1.35
CCDC7-213ENST00000639290 NLRP1Q9C000 1473 aa6.62□□□□□ -1.35
CCDC7-213ENST00000639290 PLCH2O75038 1416 aa6.61□□□□□ -1.35
CCDC7-213ENST00000639290 SCAF11Q99590 1463 aaKnown RBP6.61□□□□□ -1.35
CCDC7-213ENST00000639290 ABCC1P33527 1531 aa6.61□□□□□ -1.35
CCDC7-213ENST00000639290 RTEL1-TNFRSF6BF6WH68 1400 aa6.61□□□□□ -1.35
CCDC7-213ENST00000639290 NPM3O75607 178 aaKnown RBP6.6□□□□□ -1.35
CCDC7-213ENST00000639290 RALGAPBQ86X10 1494 aa6.6□□□□□ -1.35
CCDC7-213ENST00000639290 AFF2P51816 1311 aa6.6□□□□□ -1.35
CCDC7-213ENST00000639290 AATKQ6ZMQ8 1374 aa6.6□□□□□ -1.35
CCDC7-213ENST00000639290 CLTCQ00610 1675 aaKnown RBP6.6□□□□□ -1.35
CCDC7-213ENST00000639290 DIP2AQ14689 1571 aa6.59□□□□□ -1.35
CCDC7-213ENST00000639290 THEMISQ8N1K5 641 aaPredicted RBP6.58□□□□□ -1.36
CCDC7-213ENST00000639290 CTTNBP2Q8WZ74 1663 aa6.58□□□□□ -1.36
CCDC7-213ENST00000639290 MAP3K1Q13233 1512 aa6.58□□□□□ -1.36
CCDC7-213ENST00000639290 ITSN2Q9NZM3 1697 aa6.58□□□□□ -1.36
CCDC7-213ENST00000639290 TIAM1Q13009 1591 aa6.58□□□□□ -1.36
CCDC7-213ENST00000639290 NKTRP30414 1462 aaKnown RBP6.57□□□□□ -1.36
CCDC7-213ENST00000639290 CHD4Q14839 1912 aa6.57□□□□□ -1.36
CCDC7-213ENST00000639290 GIGYF1O75420 1035 aaPredicted RBP6.57□□□□□ -1.36
CCDC7-213ENST00000639290 QTRT2Q9H974 415 aaKnown RBP6.56□□□□□ -1.36
CCDC7-213ENST00000639290 NCOA3Q9Y6Q9 1424 aa6.56□□□□□ -1.36
CCDC7-213ENST00000639290 MYO5CQ9NQX4 1742 aa6.55□□□□□ -1.36
CCDC7-213ENST00000639290 SF3B2Q13435 895 aaKnown RBP6.54□□□□□ -1.36
CCDC7-213ENST00000639290 ATRNO75882 1429 aa6.54□□□□□ -1.36
CCDC7-213ENST00000639290 TNRQ92752 1358 aa6.54□□□□□ -1.36
CCDC7-213ENST00000639290 UGGT1Q9NYU2 1555 aa6.54□□□□□ -1.36
CCDC7-213ENST00000639290 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.54□□□□□ -1.36
CCDC7-213ENST00000639290 KDM5AP29375 1690 aaKnown RBP6.54□□□□□ -1.36
CCDC7-213ENST00000639290 MROH1Q8NDA8 1641 aa6.54□□□□□ -1.36
CCDC7-213ENST00000639290 PLXNC1O60486 1568 aa6.54□□□□□ -1.36
CCDC7-213ENST00000639290 EFCAB2Q5VUJ9 269 aa6.53□□□□□ -1.36
CCDC7-213ENST00000639290 PRDM15P57071 1507 aaPredicted RBP6.53□□□□□ -1.36
CCDC7-213ENST00000639290 SETD5Q9C0A6 1442 aa6.53□□□□□ -1.36
CCDC7-213ENST00000639290 SAMD9Q5K651 1589 aa6.53□□□□□ -1.36
CCDC7-213ENST00000639290 TRPC5Q9UL62 973 aaPredicted RBP6.52□□□□□ -1.37
CCDC7-213ENST00000639290 PZPP20742 1482 aa6.52□□□□□ -1.37
CCDC7-213ENST00000639290 DISP2A7MBM2 1401 aa6.52□□□□□ -1.37
CCDC7-213ENST00000639290 PLSCR2Q9NRY7 297 aa6.52□□□□□ -1.37
CCDC7-213ENST00000639290 KIDINS220Q9ULH0 1771 aa6.51□□□□□ -1.37
CCDC7-213ENST00000639290 MSH6P52701 1360 aa6.51□□□□□ -1.37
CCDC7-213ENST00000639290 PLEKHD1A6NEE1 506 aa6.5□□□□□ -1.37
CCDC7-213ENST00000639290 TMEM94Q12767 1356 aa6.5□□□□□ -1.37
CCDC7-213ENST00000639290 PTCH1Q13635 1447 aa6.5□□□□□ -1.37
CCDC7-213ENST00000639290 HSPA6P17066 643 aa6.5□□□□□ -1.37
CCDC7-213ENST00000639290 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.5□□□□□ -1.37
CCDC7-213ENST00000639290 TNS4Q8IZW8 715 aa6.49□□□□□ -1.37
CCDC7-213ENST00000639290 RGPD1P0DJD0 1748 aa6.49□□□□□ -1.37
CCDC7-213ENST00000639290 SLIT1O75093 1534 aa6.49□□□□□ -1.37
CCDC7-213ENST00000639290 BAG6P46379 1132 aa6.49□□□□□ -1.37
CCDC7-213ENST00000639290 SLAIN2Q9P270 581 aa6.49□□□□□ -1.37
CCDC7-213ENST00000639290 NUP153P49790 1475 aaKnown RBP6.49□□□□□ -1.37
CCDC7-213ENST00000639290 PARD3Q8TEW0 1356 aa6.48□□□□□ -1.37
CCDC7-213ENST00000639290 KCNA4P22459 653 aa6.47□□□□□ -1.37
CCDC7-213ENST00000639290 ADGBQ8N7X0 1667 aa6.47□□□□□ -1.37
CCDC7-213ENST00000639290 SRCAPQ6ZRS2 3230 aa6.47□□□□□ -1.37
CCDC7-213ENST00000639290 MIA2Q96PC5 1412 aa6.46□□□□□ -1.38
CCDC7-213ENST00000639290 KCNA6P17658 529 aa6.46□□□□□ -1.38
CCDC7-213ENST00000639290 CAMSAP2Q08AD1 1489 aa6.46□□□□□ -1.38
CCDC7-213ENST00000639290 FNBP4Q8N3X1 1017 aaPredicted RBP6.45□□□□□ -1.38
CCDC7-213ENST00000639290 EHMT2Q96KQ7 1210 aa6.45□□□□□ -1.38
CCDC7-213ENST00000639290 ADGRB2O60241 1585 aa6.45□□□□□ -1.38
CCDC7-213ENST00000639290 PSDA5PKW4 1024 aaPredicted RBP6.44□□□□□ -1.38
CCDC7-213ENST00000639290 CAMTA1Q9Y6Y1 1673 aa6.44□□□□□ -1.38
CCDC7-213ENST00000639290 CAPN15O75808 1086 aa6.43□□□□□ -1.38
CCDC7-213ENST00000639290 GPATCH8Q9UKJ3 1502 aaKnown RBP6.43□□□□□ -1.38
CCDC7-213ENST00000639290 DEFB132Q7Z7B7 95 aa6.43□□□□□ -1.38
CCDC7-213ENST00000639290 SAMD9LQ8IVG5 1584 aa6.43□□□□□ -1.38
CCDC7-213ENST00000639290 SHANK3Q9BYB0 1731 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms