RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 TSPY4P0CV99 314 aa26.69■■□□□ 1.86
SMN2-216ENST00000638794 TSPY10P0CW01 314 aa26.69■■□□□ 1.86
SMN2-216ENST00000638794 NCKAP5LQ9HCH0 1330 aa26.68■■□□□ 1.86
SMN2-216ENST00000638794 MAST1Q9Y2H9 1570 aa26.67■■□□□ 1.86
SMN2-216ENST00000638794 MYOM3Q5VTT5 1437 aa26.66■■□□□ 1.86
SMN2-216ENST00000638794 TCOF1Q13428 1488 aaKnown RBP26.66■■□□□ 1.86
SMN2-216ENST00000638794 A2ML1A8K2U0 1454 aa26.65■■□□□ 1.86
SMN2-216ENST00000638794 PZPP20742 1482 aa26.65■■□□□ 1.86
SMN2-216ENST00000638794 DNMT1P26358 1616 aaKnown RBP26.65■■□□□ 1.86
SMN2-216ENST00000638794 MIA2Q96PC5 1412 aa26.65■■□□□ 1.86
SMN2-216ENST00000638794 WASHC2CQ9Y4E1 1318 aa26.64■■□□□ 1.85
SMN2-216ENST00000638794 PKD2Q13563 968 aa26.62■■□□□ 1.85
SMN2-216ENST00000638794 FBXO31Q5XUX0 539 aaPredicted RBP26.62■■□□□ 1.85
SMN2-216ENST00000638794 RNF17Q9BXT8 1623 aaKnown RBP26.61■■□□□ 1.85
SMN2-216ENST00000638794 TNRQ92752 1358 aa26.61■■□□□ 1.85
SMN2-216ENST00000638794 IQSEC2Q5JU85 1478 aa26.59■■□□□ 1.85
SMN2-216ENST00000638794 EIF2AK4Q9P2K8 1649 aaKnown RBP26.58■■□□□ 1.85
SMN2-216ENST00000638794 ZNF335Q9H4Z2 1342 aaPredicted RBP26.57■■□□□ 1.84
SMN2-216ENST00000638794 ZC3H13Q5T200 1668 aaKnown RBP26.55■■□□□ 1.84
SMN2-216ENST00000638794 POLR1AO95602 1720 aaPredicted RBP26.55■■□□□ 1.84
SMN2-216ENST00000638794 ABCC3O15438 1527 aa26.55■■□□□ 1.84
SMN2-216ENST00000638794 MROH1Q8NDA8 1641 aa26.53■■□□□ 1.84
SMN2-216ENST00000638794 CROCC2H7BZ55 1655 aa26.53■■□□□ 1.84
SMN2-216ENST00000638794 PTPN23Q9H3S7 1636 aa26.52■■□□□ 1.84
SMN2-216ENST00000638794 APLP2Q06481 763 aa26.51■■□□□ 1.83
SMN2-216ENST00000638794 NEURL4Q96JN8 1562 aa26.5■■□□□ 1.83
SMN2-216ENST00000638794 DUOX2Q9NRD8 1548 aa26.5■■□□□ 1.83
SMN2-216ENST00000638794 NLRP1Q9C000 1473 aa26.5■■□□□ 1.83
SMN2-216ENST00000638794 CEP152O94986 1710 aa26.48■■□□□ 1.83
SMN2-216ENST00000638794 SHANK2Q9UPX8 1470 aa26.48■■□□□ 1.83
SMN2-216ENST00000638794 ABCC5O15440 1437 aa26.47■■□□□ 1.83
SMN2-216ENST00000638794 SPATA31D1Q6ZQQ2 1576 aa26.46■■□□□ 1.83
SMN2-216ENST00000638794 UGGT1Q9NYU2 1555 aa26.46■■□□□ 1.83
SMN2-216ENST00000638794 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.45■■□□□ 1.82
SMN2-216ENST00000638794 KIF15Q9NS87 1388 aa26.44■■□□□ 1.82
SMN2-216ENST00000638794 FGD6Q6ZV73 1430 aa26.43■■□□□ 1.82
SMN2-216ENST00000638794 ERVK-7P63135 1459 aa26.42■■□□□ 1.82
SMN2-216ENST00000638794 DAPK1P53355 1430 aa26.42■■□□□ 1.82
SMN2-216ENST00000638794 CFAP65Q6ZU64 1925 aaKnown RBP26.42■■□□□ 1.82
SMN2-216ENST00000638794 THEMISQ8N1K5 641 aaPredicted RBP26.42■■□□□ 1.82
SMN2-216ENST00000638794 ERBINQ96RT1 1412 aa26.4■■□□□ 1.82
SMN2-216ENST00000638794 PRDM15P57071 1507 aaPredicted RBP26.4■■□□□ 1.82
SMN2-216ENST00000638794 ANKLE2Q86XL3 938 aa26.4■■□□□ 1.82
SMN2-216ENST00000638794 DEPDC5O75140 1603 aa26.39■■□□□ 1.81
SMN2-216ENST00000638794 RRP7BPQ9NSQ0 103 aa26.38■■□□□ 1.81
SMN2-216ENST00000638794 UBAP1LF5GYI3 381 aa26.36■■□□□ 1.81
SMN2-216ENST00000638794 MED14O60244 1454 aa26.36■■□□□ 1.81
SMN2-216ENST00000638794 NPHP4O75161 1426 aaPredicted RBP26.34■■□□□ 1.81
SMN2-216ENST00000638794 IQGAP1P46940 1657 aa26.34■■□□□ 1.81
SMN2-216ENST00000638794 CPS1P31327 1500 aa26.34■■□□□ 1.81
SMN2-216ENST00000638794 UBR1Q8IWV7 1749 aa26.34■■□□□ 1.81
SMN2-216ENST00000638794 VWDEQ8N2E2 1590 aa26.33■■□□□ 1.81
SMN2-216ENST00000638794 DISP3Q9P2K9 1392 aa26.32■■□□□ 1.8
SMN2-216ENST00000638794 ARHGAP31Q2M1Z3 1444 aa26.31■■□□□ 1.8
SMN2-216ENST00000638794 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.29■■□□□ 1.8
SMN2-216ENST00000638794 CHIC2Q9UKJ5 165 aa26.29■■□□□ 1.8
SMN2-216ENST00000638794 ANKRD30AQ9BXX3 1397 aa26.29■■□□□ 1.8
SMN2-216ENST00000638794 KANK1Q14678 1352 aa26.24■■□□□ 1.79
SMN2-216ENST00000638794 ADGRL2O95490 1459 aa26.23■■□□□ 1.79
SMN2-216ENST00000638794 STRCP1A6NGW2 1772 aa26.23■■□□□ 1.79
SMN2-216ENST00000638794 LMTK2Q8IWU2 1503 aa26.22■■□□□ 1.79
SMN2-216ENST00000638794 PIK3C2BO00750 1634 aa26.21■■□□□ 1.79
SMN2-216ENST00000638794 SLIT1O75093 1534 aa26.21■■□□□ 1.79
SMN2-216ENST00000638794 SCAF11Q99590 1463 aaKnown RBP26.21■■□□□ 1.79
SMN2-216ENST00000638794 ARHGAP23Q9P227 1491 aa26.21■■□□□ 1.79
SMN2-216ENST00000638794 FAM50AQ14320 339 aaKnown RBP26.19■■□□□ 1.78
SMN2-216ENST00000638794 ILDR2Q71H61 639 aa26.18■■□□□ 1.78
SMN2-216ENST00000638794 EFCAB6Q5THR3 1501 aa26.16■■□□□ 1.78
SMN2-216ENST00000638794 TOM1O60784 492 aa26.16■■□□□ 1.78
SMN2-216ENST00000638794 LTKP29376 864 aa26.16■■□□□ 1.78
SMN2-216ENST00000638794 SCAF1Q9H7N4 1312 aaKnown RBP26.15■■□□□ 1.78
SMN2-216ENST00000638794 PIP4K2BP78356 416 aa26.15■■□□□ 1.78
SMN2-216ENST00000638794 SYNMO15061 1565 aa26.15■■□□□ 1.78
SMN2-216ENST00000638794 TXNDC2Q86VQ3 553 aa26.14■■□□□ 1.78
SMN2-216ENST00000638794 KDM5AP29375 1690 aaKnown RBP26.14■■□□□ 1.78
SMN2-216ENST00000638794 ALKQ9UM73 1620 aa26.13■■□□□ 1.77
SMN2-216ENST00000638794 LRRC7Q96NW7 1537 aa26.13■■□□□ 1.77
SMN2-216ENST00000638794 ANKRD50Q9ULJ7 1429 aa26.12■■□□□ 1.77
SMN2-216ENST00000638794 TMEM2Q9UHN6 1383 aa26.11■■□□□ 1.77
SMN2-216ENST00000638794 NOS1P29475 1434 aa26.1■■□□□ 1.77
SMN2-216ENST00000638794 HSPA1LP34931 641 aa26.09■■□□□ 1.77
SMN2-216ENST00000638794 IDI1Q13907 227 aa26.09■■□□□ 1.77
SMN2-216ENST00000638794 STAG3Q9UJ98 1225 aa26.09■■□□□ 1.77
SMN2-216ENST00000638794 EID1Q9Y6B2 187 aa26.09■■□□□ 1.77
SMN2-216ENST00000638794 ADGRB3O60242 1522 aa26.05■■□□□ 1.76
SMN2-216ENST00000638794 TET3O43151 1660 aa26.04■■□□□ 1.76
SMN2-216ENST00000638794 RPRD2Q5VT52 1461 aaKnown RBP26.04■■□□□ 1.76
SMN2-216ENST00000638794 UNC13BO14795 1591 aa26.02■■□□□ 1.76
SMN2-216ENST00000638794 XIRP1Q702N8 1843 aaKnown RBP26.02■■□□□ 1.76
SMN2-216ENST00000638794 GCC2Q8IWJ2 1684 aa26■■□□□ 1.75
SMN2-216ENST00000638794 SLC52A1Q9NWF4 448 aa26■■□□□ 1.75
SMN2-216ENST00000638794 SOCS7O14512 581 aa25.98■■□□□ 1.75
SMN2-216ENST00000638794 MYO5BQ9ULV0 1848 aa25.98■■□□□ 1.75
SMN2-216ENST00000638794 MED1Q15648 1581 aaPredicted RBP25.97■■□□□ 1.75
SMN2-216ENST00000638794 ROCK1Q13464 1354 aa25.96■■□□□ 1.75
SMN2-216ENST00000638794 E9PCH4 1651 aa25.93■■□□□ 1.74
SMN2-216ENST00000638794 SLC26A8Q96RN1 970 aa25.92■■□□□ 1.74
SMN2-216ENST00000638794 IQGAP3Q86VI3 1631 aa25.92■■□□□ 1.74
SMN2-216ENST00000638794 TMEM131LA2VDJ0 1609 aa25.91■■□□□ 1.74
SMN2-216ENST00000638794 PPARGC1BQ86YN6 1023 aaKnown RBP25.9■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms