RNA–Protein interactions for RNA: ENST00000638663.1

SCARB2-212, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-212ENST00000638663 L3MBTL2Q969R5 705 aa31.11■■■□□ 2.57
SCARB2-212ENST00000638663 MLH3Q9UHC1 1453 aa31.09■■■□□ 2.57
SCARB2-212ENST00000638663 HECW2Q9P2P5 1572 aa31.08■■■□□ 2.57
SCARB2-212ENST00000638663 TEX14Q8IWB6 1497 aa31.06■■■□□ 2.56
SCARB2-212ENST00000638663 KIF3BO15066 747 aa31.05■■■□□ 2.56
SCARB2-212ENST00000638663 TSPOAP1O95153 1857 aa31.05■■■□□ 2.56
SCARB2-212ENST00000638663 DEPDC5O75140 1603 aa31.03■■■□□ 2.56
SCARB2-212ENST00000638663 EIF2AK4Q9P2K8 1649 aaKnown RBP31.03■■■□□ 2.56
SCARB2-212ENST00000638663 A2MP01023 1474 aa31.02■■■□□ 2.56
SCARB2-212ENST00000638663 RICTORQ6R327 1708 aa31.01■■■□□ 2.55
SCARB2-212ENST00000638663 PPRC1Q5VV67 1664 aaKnown RBP31.01■■■□□ 2.55
SCARB2-212ENST00000638663 ABCA6Q8N139 1617 aa30.97■■■□□ 2.55
SCARB2-212ENST00000638663 KIF13AQ9H1H9 1805 aa30.96■■■□□ 2.55
SCARB2-212ENST00000638663 KANK1Q14678 1352 aa30.96■■■□□ 2.55
SCARB2-212ENST00000638663 PLA2R1Q13018 1463 aa30.95■■■□□ 2.54
SCARB2-212ENST00000638663 FRMPD1Q5SYB0 1578 aa30.94■■■□□ 2.54
SCARB2-212ENST00000638663 PRDM15P57071 1507 aaPredicted RBP30.93■■■□□ 2.54
SCARB2-212ENST00000638663 MROH1Q8NDA8 1641 aa30.93■■■□□ 2.54
SCARB2-212ENST00000638663 VWDEQ8N2E2 1590 aa30.92■■■□□ 2.54
SCARB2-212ENST00000638663 CCDC144AA2RUR9 1427 aa30.92■■■□□ 2.54
SCARB2-212ENST00000638663 DIP2CQ9Y2E4 1556 aa30.89■■■□□ 2.54
SCARB2-212ENST00000638663 E9PCH4 1651 aa30.89■■■□□ 2.53
SCARB2-212ENST00000638663 NBPF8Q3BBV2 869 aa30.88■■■□□ 2.53
SCARB2-212ENST00000638663 TET3O43151 1660 aa30.87■■■□□ 2.53
SCARB2-212ENST00000638663 ATP10AO60312 1499 aa30.87■■■□□ 2.53
SCARB2-212ENST00000638663 RNF17Q9BXT8 1623 aaKnown RBP30.86■■■□□ 2.53
SCARB2-212ENST00000638663 YEATS2Q9ULM3 1422 aa30.86■■■□□ 2.53
SCARB2-212ENST00000638663 HIRIP3Q9BW71 556 aaPredicted RBP30.85■■■□□ 2.53
SCARB2-212ENST00000638663 ZMYM4Q5VZL5 1548 aa30.83■■■□□ 2.53
SCARB2-212ENST00000638663 GGT6Q6P531 493 aa30.81■■■□□ 2.52
SCARB2-212ENST00000638663 BCORL1Q5H9F3 1711 aa30.8■■■□□ 2.52
SCARB2-212ENST00000638663 ZNF326Q5BKZ1 582 aaKnown RBP30.78■■■□□ 2.52
SCARB2-212ENST00000638663 PTPRTO14522 1441 aa30.75■■■□□ 2.51
SCARB2-212ENST00000638663 LMTK2Q8IWU2 1503 aa30.75■■■□□ 2.51
SCARB2-212ENST00000638663 CEP152O94986 1710 aa30.75■■■□□ 2.51
SCARB2-212ENST00000638663 DCAF11Q8TEB1 546 aa30.75■■■□□ 2.51
SCARB2-212ENST00000638663 TRPM2O94759 1503 aa30.74■■■□□ 2.51
SCARB2-212ENST00000638663 SPHKAPQ2M3C7 1700 aa30.74■■■□□ 2.51
SCARB2-212ENST00000638663 RGL3Q3MIN7 710 aa30.74■■■□□ 2.51
SCARB2-212ENST00000638663 EFCAB6Q5THR3 1501 aa30.74■■■□□ 2.51
SCARB2-212ENST00000638663 KDM2AQ9Y2K7 1162 aa30.74■■■□□ 2.51
SCARB2-212ENST00000638663 COL17A1Q9UMD9 1497 aaPredicted RBP30.72■■■□□ 2.51
SCARB2-212ENST00000638663 UHRF1BP1Q6BDS2 1440 aa30.72■■■□□ 2.51
SCARB2-212ENST00000638663 HSPA5P11021 654 aaKnown RBP30.71■■■□□ 2.51
SCARB2-212ENST00000638663 EIF4G2P78344 907 aaKnown RBP eCLIP30.7■■■□□ 2.51
SCARB2-212ENST00000638663 WASHC2CQ9Y4E1 1318 aa30.68■■■□□ 2.5
SCARB2-212ENST00000638663 ABCC3O15438 1527 aa30.66■■■□□ 2.5
SCARB2-212ENST00000638663 CLTCL1P53675 1640 aa30.66■■■□□ 2.5
SCARB2-212ENST00000638663 SPATA31E1Q6ZUB1 1445 aa30.63■■■□□ 2.49
SCARB2-212ENST00000638663 MIER1Q8N108 512 aa30.63■■■□□ 2.49
SCARB2-212ENST00000638663 NPATQ14207 1427 aa30.61■■■□□ 2.49
SCARB2-212ENST00000638663 RALGAPBQ86X10 1494 aa30.6■■■□□ 2.49
SCARB2-212ENST00000638663 DDX10Q13206 875 aaKnown RBP30.58■■■□□ 2.49
SCARB2-212ENST00000638663 PRAG1Q86YV5 1406 aa30.57■■■□□ 2.48
SCARB2-212ENST00000638663 UGGT1Q9NYU2 1555 aa30.57■■■□□ 2.48
SCARB2-212ENST00000638663 REREQ9P2R6 1566 aa30.57■■■□□ 2.48
SCARB2-212ENST00000638663 CAMSAP1Q5T5Y3 1602 aa30.57■■■□□ 2.48
SCARB2-212ENST00000638663 ARHGEF40Q8TER5 1519 aa30.54■■■□□ 2.48
SCARB2-212ENST00000638663 ZC3H13Q5T200 1668 aaKnown RBP30.53■■■□□ 2.48
SCARB2-212ENST00000638663 TRHP20396 242 aaPredicted RBP30.52■■■□□ 2.48
SCARB2-212ENST00000638663 CFAP65Q6ZU64 1925 aaKnown RBP30.52■■■□□ 2.48
SCARB2-212ENST00000638663 AGLP35573 1532 aa30.52■■■□□ 2.48
SCARB2-212ENST00000638663 CARD11Q9BXL7 1154 aa30.51■■■□□ 2.47
SCARB2-212ENST00000638663 USP47Q96K76 1375 aa30.51■■■□□ 2.47
SCARB2-212ENST00000638663 DNAJC5Q9H3Z4 198 aa30.49■■■□□ 2.47
SCARB2-212ENST00000638663 TRPM1Q7Z4N2 1603 aa30.48■■■□□ 2.47
SCARB2-212ENST00000638663 SIGLEC1Q9BZZ2 1709 aa30.48■■■□□ 2.47
SCARB2-212ENST00000638663 CNTLNQ9NXG0 1405 aa30.48■■■□□ 2.47
SCARB2-212ENST00000638663 ROCK2O75116 1388 aaKnown RBP30.48■■■□□ 2.47
SCARB2-212ENST00000638663 ARHGAP31Q2M1Z3 1444 aa30.46■■■□□ 2.47
SCARB2-212ENST00000638663 KIF1BO60333 1816 aa30.46■■■□□ 2.47
SCARB2-212ENST00000638663 NEURL4Q96JN8 1562 aa30.45■■■□□ 2.47
SCARB2-212ENST00000638663 WASHC2AQ641Q2 1341 aa30.45■■■□□ 2.47
SCARB2-212ENST00000638663 NOS1P29475 1434 aa30.44■■■□□ 2.46
SCARB2-212ENST00000638663 C11orf95C9JLR9 678 aaPredicted RBP30.41■■■□□ 2.46
SCARB2-212ENST00000638663 NBPF1Q3BBV0 1214 aa30.41■■■□□ 2.46
SCARB2-212ENST00000638663 MLECQ14165 292 aa30.39■■■□□ 2.46
SCARB2-212ENST00000638663 STAC3Q96MF2 364 aa30.39■■■□□ 2.46
SCARB2-212ENST00000638663 MROH2AA6NES4 1674 aa30.39■■■□□ 2.46
SCARB2-212ENST00000638663 CHGAP10645 457 aaKnown RBP30.39■■■□□ 2.46
SCARB2-212ENST00000638663 PPP6R1Q9UPN7 881 aa30.39■■■□□ 2.46
SCARB2-212ENST00000638663 MADDQ8WXG6 1647 aa30.39■■■□□ 2.45
SCARB2-212ENST00000638663 SYNMO15061 1565 aa30.37■■■□□ 2.45
SCARB2-212ENST00000638663 GPRASP1Q5JY77 1395 aa30.37■■■□□ 2.45
SCARB2-212ENST00000638663 ADGRB3O60242 1522 aa30.37■■■□□ 2.45
SCARB2-212ENST00000638663 CCDC7Q96M83 1385 aa30.36■■■□□ 2.45
SCARB2-212ENST00000638663 PIK3C2BO00750 1634 aa30.32■■■□□ 2.44
SCARB2-212ENST00000638663 CLTCQ00610 1675 aaKnown RBP30.32■■■□□ 2.44
SCARB2-212ENST00000638663 PREX1Q8TCU6 1659 aa30.32■■■□□ 2.44
SCARB2-212ENST00000638663 KIF7Q2M1P5 1343 aa30.31■■■□□ 2.44
SCARB2-212ENST00000638663 ST20-MTHFSA0A0A6YYL1 179 aa30.31■■■□□ 2.44
SCARB2-212ENST00000638663 LAMC1P11047 1609 aa30.31■■■□□ 2.44
SCARB2-212ENST00000638663 MYOM2P54296 1465 aa30.3■■■□□ 2.44
SCARB2-212ENST00000638663 POLR1AO95602 1720 aaPredicted RBP30.29■■■□□ 2.44
SCARB2-212ENST00000638663 IFT172Q9UG01 1749 aa30.29■■■□□ 2.44
SCARB2-212ENST00000638663 ARID4BQ4LE39 1312 aaPredicted RBP30.29■■■□□ 2.44
SCARB2-212ENST00000638663 FBXO31Q5XUX0 539 aaPredicted RBP30.28■■■□□ 2.44
SCARB2-212ENST00000638663 ADGRF5Q8IZF2 1346 aa30.27■■■□□ 2.44
SCARB2-212ENST00000638663 IDI1Q13907 227 aa30.26■■■□□ 2.44
SCARB2-212ENST00000638663 SLC52A1Q9NWF4 448 aa30.26■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms