RNA–Protein interactions for RNA: ENST00000638409.1

SCARB2-209, Transcript of scavenger receptor class B member 2, humanhuman

Gene SCARB2, Length 2,753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-209ENST00000638409 DISP1Q96F81 1524 aa11.64□□□□□ -0.55
SCARB2-209ENST00000638409 CAPN15O75808 1086 aa11.64□□□□□ -0.55
SCARB2-209ENST00000638409 PPP1R37O75864 691 aa11.64□□□□□ -0.55
SCARB2-209ENST00000638409 PYGBP11216 843 aa11.64□□□□□ -0.55
SCARB2-209ENST00000638409 CARMIL2Q6F5E8 1435 aa11.64□□□□□ -0.55
SCARB2-209ENST00000638409 FBXW7Q969H0 707 aa11.63□□□□□ -0.55
SCARB2-209ENST00000638409 ZBTB12Q9Y330 459 aaPredicted RBP11.63□□□□□ -0.55
SCARB2-209ENST00000638409 POM121Q96HA1 1249 aa11.62□□□□□ -0.55
SCARB2-209ENST00000638409 KIAA0556O60303 1618 aa11.62□□□□□ -0.55
SCARB2-209ENST00000638409 SAMD9Q5K651 1589 aa11.61□□□□□ -0.55
SCARB2-209ENST00000638409 TNIKQ9UKE5 1360 aa11.6□□□□□ -0.55
SCARB2-209ENST00000638409 SPDYE2BA6NHP3 402 aa11.6□□□□□ -0.55
SCARB2-209ENST00000638409 SPDYE6P0CI01 402 aa11.6□□□□□ -0.55
SCARB2-209ENST00000638409 SPDYE2Q495Y8 402 aa11.6□□□□□ -0.55
SCARB2-209ENST00000638409 FAM212AQ96EL1 285 aa11.6□□□□□ -0.55
SCARB2-209ENST00000638409 CCDC97Q96F63 343 aaPredicted RBP11.6□□□□□ -0.55
SCARB2-209ENST00000638409 MFRPQ9BY79 579 aa11.6□□□□□ -0.55
SCARB2-209ENST00000638409 MCM6Q14566 821 aa11.59□□□□□ -0.55
SCARB2-209ENST00000638409 CYB5RLQ6IPT4 315 aa11.58□□□□□ -0.56
SCARB2-209ENST00000638409 EFCAB5A4FU69 1503 aa11.58□□□□□ -0.56
SCARB2-209ENST00000638409 PROSER2Q86WR7 435 aaPredicted RBP11.57□□□□□ -0.56
SCARB2-209ENST00000638409 CHRM1P11229 460 aaPredicted RBP11.56□□□□□ -0.56
SCARB2-209ENST00000638409 PTPRGP23470 1445 aa11.56□□□□□ -0.56
SCARB2-209ENST00000638409 DDRGK1Q96HY6 314 aa11.56□□□□□ -0.56
SCARB2-209ENST00000638409 RASEFQ8IZ41 740 aa11.55□□□□□ -0.56
SCARB2-209ENST00000638409 SERPINA10Q9UK55 444 aa11.55□□□□□ -0.56
SCARB2-209ENST00000638409 NCKAP5LQ9HCH0 1330 aa11.54□□□□□ -0.56
SCARB2-209ENST00000638409 FNBP4Q8N3X1 1017 aaPredicted RBP11.54□□□□□ -0.56
SCARB2-209ENST00000638409 UHRF1BP1LA0JNW5 1464 aa11.53□□□□□ -0.56
SCARB2-209ENST00000638409 PARP9Q8IXQ6 854 aa11.53□□□□□ -0.56
SCARB2-209ENST00000638409 ADCY10Q96PN6 1610 aa11.51□□□□□ -0.57
SCARB2-209ENST00000638409 ARHGAP35Q9NRY4 1499 aa11.51□□□□□ -0.57
SCARB2-209ENST00000638409 UACAQ9BZF9 1416 aa11.51□□□□□ -0.57
SCARB2-209ENST00000638409 ABCA8O94911 1581 aa11.5□□□□□ -0.57
SCARB2-209ENST00000638409 LARP6Q9BRS8 491 aaKnown RBP11.5□□□□□ -0.57
SCARB2-209ENST00000638409 ABCC2Q92887 1545 aa11.49□□□□□ -0.57
SCARB2-209ENST00000638409 FHOD3Q2V2M9 1422 aa11.48□□□□□ -0.57
SCARB2-209ENST00000638409 FAM177A1Q8N128 213 aaPredicted RBP11.47□□□□□ -0.57
SCARB2-209ENST00000638409 PLB1Q6P1J6 1458 aa11.46□□□□□ -0.57
SCARB2-209ENST00000638409 CLIP1P30622 1438 aa11.46□□□□□ -0.57
SCARB2-209ENST00000638409 PLSCR2Q9NRY7 297 aa11.46□□□□□ -0.58
SCARB2-209ENST00000638409 KDM5BQ9UGL1 1544 aa11.46□□□□□ -0.58
SCARB2-209ENST00000638409 DHX37Q8IY37 1157 aaKnown RBP11.45□□□□□ -0.58
SCARB2-209ENST00000638409 FMN1Q68DA7 1419 aa11.45□□□□□ -0.58
SCARB2-209ENST00000638409 RAPGEF6Q8TEU7 1601 aa11.45□□□□□ -0.58
SCARB2-209ENST00000638409 GPR37O15354 613 aa11.45□□□□□ -0.58
SCARB2-209ENST00000638409 CEP162Q5TB80 1403 aa11.44□□□□□ -0.58
SCARB2-209ENST00000638409 CCDC102AQ96A19 550 aa11.44□□□□□ -0.58
SCARB2-209ENST00000638409 MAPKBP1O60336 1514 aa11.44□□□□□ -0.58
SCARB2-209ENST00000638409 ZCCHC11Q5TAX3 1644 aaKnown RBP11.41□□□□□ -0.58
SCARB2-209ENST00000638409 CARNS1A5YM72 827 aa11.4□□□□□ -0.58
SCARB2-209ENST00000638409 NUP153P49790 1475 aaKnown RBP11.4□□□□□ -0.58
SCARB2-209ENST00000638409 GOPCQ9HD26 462 aa11.39□□□□□ -0.59
SCARB2-209ENST00000638409 ATP10BO94823 1461 aa11.39□□□□□ -0.59
SCARB2-209ENST00000638409 MNX1P50219 401 aaPredicted RBP11.39□□□□□ -0.59
SCARB2-209ENST00000638409 CASKIN1Q8WXD9 1431 aa11.38□□□□□ -0.59
SCARB2-209ENST00000638409 HECW1Q76N89 1606 aa11.38□□□□□ -0.59
SCARB2-209ENST00000638409 ARIH1Q9Y4X5 557 aaPredicted RBP11.38□□□□□ -0.59
SCARB2-209ENST00000638409 UNCXA6NJT0 531 aa11.37□□□□□ -0.59
SCARB2-209ENST00000638409 PCMTD1Q96MG8 357 aaPredicted RBP11.37□□□□□ -0.59
SCARB2-209ENST00000638409 FYCO1Q9BQS8 1478 aa11.36□□□□□ -0.59
SCARB2-209ENST00000638409 ASXL2Q76L83 1435 aa11.36□□□□□ -0.59
SCARB2-209ENST00000638409 AMHR2Q16671 573 aa11.36□□□□□ -0.59
SCARB2-209ENST00000638409 MS4A1P11836 297 aa11.35□□□□□ -0.59
SCARB2-209ENST00000638409 PCF11O94913 1555 aaKnown RBP11.35□□□□□ -0.59
SCARB2-209ENST00000638409 ABCC10Q5T3U5 1492 aa11.35□□□□□ -0.59
SCARB2-209ENST00000638409 RSPH4AQ5TD94 716 aa11.35□□□□□ -0.59
SCARB2-209ENST00000638409 MYT1LQ9UL68 1186 aa11.35□□□□□ -0.59
SCARB2-209ENST00000638409 TTLL12Q14166 644 aaPredicted RBP11.34□□□□□ -0.59
SCARB2-209ENST00000638409 EPRSP07814 1512 aaKnown RBP11.34□□□□□ -0.59
SCARB2-209ENST00000638409 LRRIQ1Q96JM4 1722 aa11.34□□□□□ -0.59
SCARB2-209ENST00000638409 WDR7Q9Y4E6 1490 aa11.33□□□□□ -0.59
SCARB2-209ENST00000638409 FBXO22Q8NEZ5 403 aa11.33□□□□□ -0.59
SCARB2-209ENST00000638409 GLI2P10070 1586 aa11.33□□□□□ -0.6
SCARB2-209ENST00000638409 DDX27Q96GQ7 796 aaKnown RBP11.33□□□□□ -0.6
SCARB2-209ENST00000638409 POLR3GLQ9BT43 218 aa11.33□□□□□ -0.6
SCARB2-209ENST00000638409 DIP2BQ9P265 1576 aa11.33□□□□□ -0.6
SCARB2-209ENST00000638409 KIF13AQ9H1H9 1805 aa11.33□□□□□ -0.6
SCARB2-209ENST00000638409 CCDC18Q5T9S5 1454 aa11.33□□□□□ -0.6
SCARB2-209ENST00000638409 COG6Q9Y2V7 657 aa11.33□□□□□ -0.6
SCARB2-209ENST00000638409 VPS8Q8N3P4 1428 aa11.32□□□□□ -0.6
SCARB2-209ENST00000638409 IRF6O14896 467 aa11.32□□□□□ -0.6
SCARB2-209ENST00000638409 MFSD10Q14728 455 aa11.32□□□□□ -0.6
SCARB2-209ENST00000638409 PCDHB8Q9UN66 801 aa11.32□□□□□ -0.6
SCARB2-209ENST00000638409 PCDHB13Q9Y5F0 798 aa11.32□□□□□ -0.6
SCARB2-209ENST00000638409 CCDC27Q2M243 656 aa11.31□□□□□ -0.6
SCARB2-209ENST00000638409 ZNF330Q9Y3S2 320 aaPredicted RBP11.31□□□□□ -0.6
SCARB2-209ENST00000638409 MINK1Q8N4C8 1332 aaPredicted RBP11.31□□□□□ -0.6
SCARB2-209ENST00000638409 FECHP22830 423 aa11.3□□□□□ -0.6
SCARB2-209ENST00000638409 CAMK2BQ13554 666 aa11.3□□□□□ -0.6
SCARB2-209ENST00000638409 CDK13Q14004 1512 aaKnown RBP11.3□□□□□ -0.6
SCARB2-209ENST00000638409 PHF8Q9UPP1 1060 aa11.3□□□□□ -0.6
SCARB2-209ENST00000638409 MAP2K5Q13163 448 aa11.28□□□□□ -0.6
SCARB2-209ENST00000638409 REPIN1Q9BWE0 567 aaKnown RBP11.28□□□□□ -0.6
SCARB2-209ENST00000638409 AMOTL2Q9Y2J4 779 aa11.28□□□□□ -0.6
SCARB2-209ENST00000638409 CRISPLD2Q9H0B8 497 aa11.28□□□□□ -0.6
SCARB2-209ENST00000638409 PLEKHD1A6NEE1 506 aa11.28□□□□□ -0.6
SCARB2-209ENST00000638409 PDAP1Q13442 181 aaKnown RBP11.28□□□□□ -0.6
SCARB2-209ENST00000638409 MAP3K4Q9Y6R4 1608 aa11.27□□□□□ -0.6
SCARB2-209ENST00000638409 PPM1GO15355 546 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms