RNA–Protein interactions for RNA: ENST00000637923.2

TCF4-288, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 7,314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-288ENST00000637923 DDRGK1Q96HY6 314 aa6.77□□□□□ -1.32
TCF4-288ENST00000637923 GPATCH3Q96I76 525 aa6.77□□□□□ -1.32
TCF4-288ENST00000637923 GOLGA3Q08378 1498 aa6.77□□□□□ -1.33
TCF4-288ENST00000637923 PES1O00541 588 aaKnown RBP6.77□□□□□ -1.33
TCF4-288ENST00000637923 PDS5BQ9NTI5 1447 aa6.77□□□□□ -1.33
TCF4-288ENST00000637923 SOGA1O94964 1423 aa6.77□□□□□ -1.33
TCF4-288ENST00000637923 TERF2IPQ9NYB0 399 aa6.77□□□□□ -1.33
TCF4-288ENST00000637923 NUP155O75694 1391 aa6.77□□□□□ -1.33
TCF4-288ENST00000637923 RRP7AQ9Y3A4 280 aaKnown RBP6.76□□□□□ -1.33
TCF4-288ENST00000637923 AMOTL1Q8IY63 956 aa6.76□□□□□ -1.33
TCF4-288ENST00000637923 APPP05067 770 aa6.76□□□□□ -1.33
TCF4-288ENST00000637923 MS4A1P11836 297 aa6.76□□□□□ -1.33
TCF4-288ENST00000637923 KDM4AO75164 1064 aa6.75□□□□□ -1.33
TCF4-288ENST00000637923 GRM1Q13255 1194 aa6.75□□□□□ -1.33
TCF4-288ENST00000637923 RBM42Q9BTD8 480 aaKnown RBP6.75□□□□□ -1.33
TCF4-288ENST00000637923 CHAF1AQ13111 956 aaPredicted RBP6.75□□□□□ -1.33
TCF4-288ENST00000637923 NLRP2Q9NX02 1062 aa6.75□□□□□ -1.33
TCF4-288ENST00000637923 MYCNP04198 464 aaPredicted RBP6.75□□□□□ -1.33
TCF4-288ENST00000637923 TEFQ10587 303 aa6.75□□□□□ -1.33
TCF4-288ENST00000637923 CCDC27Q2M243 656 aa6.75□□□□□ -1.33
TCF4-288ENST00000637923 ANP32EQ9BTT0 268 aa6.75□□□□□ -1.33
TCF4-288ENST00000637923 FOXD4L5Q5VV16 416 aaPredicted RBP6.75□□□□□ -1.33
TCF4-288ENST00000637923 FOXD4L4Q8WXT5 416 aaPredicted RBP6.75□□□□□ -1.33
TCF4-288ENST00000637923 FOXD4L1Q9NU39 408 aa6.75□□□□□ -1.33
TCF4-288ENST00000637923 ESCO1Q5FWF5 840 aa6.75□□□□□ -1.33
TCF4-288ENST00000637923 CEP162Q5TB80 1403 aa6.75□□□□□ -1.33
TCF4-288ENST00000637923 COG3Q96JB2 828 aa6.74□□□□□ -1.33
TCF4-288ENST00000637923 AIMP1Q12904 312 aaKnown RBP6.74□□□□□ -1.33
TCF4-288ENST00000637923 IKQ13123 557 aaPredicted RBP6.74□□□□□ -1.33
TCF4-288ENST00000637923 HSCBQ8IWL3 235 aa6.74□□□□□ -1.33
TCF4-288ENST00000637923 CLUAP1Q96AJ1 413 aa6.74□□□□□ -1.33
TCF4-288ENST00000637923 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.74□□□□□ -1.33
TCF4-288ENST00000637923 A0A0U1RQG5 324 aaPredicted RBP6.74□□□□□ -1.33
TCF4-288ENST00000637923 SMC4Q9NTJ3 1288 aa6.74□□□□□ -1.33
TCF4-288ENST00000637923 JPH4Q96JJ6 628 aa6.74□□□□□ -1.33
TCF4-288ENST00000637923 PROSER2Q86WR7 435 aaPredicted RBP6.73□□□□□ -1.33
TCF4-288ENST00000637923 CEP89Q96ST8 783 aa6.73□□□□□ -1.33
TCF4-288ENST00000637923 WDR70Q9NW82 654 aa6.73□□□□□ -1.33
TCF4-288ENST00000637923 NRDCO43847 1150 aa6.73□□□□□ -1.33
TCF4-288ENST00000637923 TMEM132AQ24JP5 1023 aa6.73□□□□□ -1.33
TCF4-288ENST00000637923 CALD1Q05682 793 aaKnown RBP6.73□□□□□ -1.33
TCF4-288ENST00000637923 IPO8O15397 1037 aaKnown RBP6.72□□□□□ -1.33
TCF4-288ENST00000637923 RILPL2Q969X0 211 aa6.72□□□□□ -1.33
TCF4-288ENST00000637923 CCDC43Q96MW1 224 aaKnown RBP6.72□□□□□ -1.33
TCF4-288ENST00000637923 RBM5P52756 815 aaKnown RBP eCLIP6.72□□□□□ -1.33
TCF4-288ENST00000637923 CHMP4BP1P59074 171 aa6.72□□□□□ -1.33
TCF4-288ENST00000637923 DDX54Q8TDD1 881 aaKnown RBP6.72□□□□□ -1.33
TCF4-288ENST00000637923 AKAP17AQ02040 695 aaKnown RBP6.72□□□□□ -1.33
TCF4-288ENST00000637923 XPCQ01831 940 aaPredicted RBP6.71□□□□□ -1.33
TCF4-288ENST00000637923 FOSBP53539 338 aa6.71□□□□□ -1.34
TCF4-288ENST00000637923 FOXD4L6Q3SYB3 417 aaPredicted RBP6.71□□□□□ -1.34
TCF4-288ENST00000637923 FOXD4L3Q6VB84 417 aaPredicted RBP6.71□□□□□ -1.34
TCF4-288ENST00000637923 STK11IPQ8N1F8 1099 aa6.71□□□□□ -1.34
TCF4-288ENST00000637923 C9orf78Q9NZ63 289 aaPredicted RBP6.71□□□□□ -1.34
TCF4-288ENST00000637923 RAPGEF4Q8WZA2 1011 aa6.7□□□□□ -1.34
TCF4-288ENST00000637923 ZNF219Q9P2Y4 722 aaPredicted RBP6.7□□□□□ -1.34
TCF4-288ENST00000637923 ADAMTS2O95450 1211 aa6.7□□□□□ -1.34
TCF4-288ENST00000637923 BICDL1Q6ZP65 573 aa6.7□□□□□ -1.34
TCF4-288ENST00000637923 EEA1Q15075 1411 aa6.7□□□□□ -1.34
TCF4-288ENST00000637923 ARID3AQ99856 593 aa6.7□□□□□ -1.34
TCF4-288ENST00000637923 HSPA5P11021 654 aaKnown RBP6.7□□□□□ -1.34
TCF4-288ENST00000637923 ATP2B2Q01814 1243 aa6.7□□□□□ -1.34
TCF4-288ENST00000637923 EIF3AQ14152 1382 aaKnown RBP6.7□□□□□ -1.34
TCF4-288ENST00000637923 KTN1Q86UP2 1357 aaKnown RBP6.7□□□□□ -1.34
TCF4-288ENST00000637923 PAF1Q8N7H5 531 aa6.7□□□□□ -1.34
TCF4-288ENST00000637923 PMFBP1Q8TBY8 1022 aa6.7□□□□□ -1.34
TCF4-288ENST00000637923 WWC3Q9ULE0 1092 aa6.7□□□□□ -1.34
TCF4-288ENST00000637923 NACADO15069 1562 aa6.7□□□□□ -1.34
TCF4-288ENST00000637923 RTN4Q9NQC3 1192 aaKnown RBP6.69□□□□□ -1.34
TCF4-288ENST00000637923 NEXNQ0ZGT2 675 aa6.69□□□□□ -1.34
TCF4-288ENST00000637923 PDE3BQ13370 1112 aa6.69□□□□□ -1.34
TCF4-288ENST00000637923 TPD52L1Q16890 204 aaPredicted RBP6.69□□□□□ -1.34
TCF4-288ENST00000637923 VSIG10Q8N0Z9 540 aa6.69□□□□□ -1.34
TCF4-288ENST00000637923 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.69□□□□□ -1.34
TCF4-288ENST00000637923 MFAP1P55081 439 aaKnown RBP6.69□□□□□ -1.34
TCF4-288ENST00000637923 PPM1FP49593 454 aaPredicted RBP6.69□□□□□ -1.34
TCF4-288ENST00000637923 BCL2L13Q9BXK5 485 aa6.69□□□□□ -1.34
TCF4-288ENST00000637923 ECM2O94769 699 aaPredicted RBP6.69□□□□□ -1.34
TCF4-288ENST00000637923 ARHGAP35Q9NRY4 1499 aa6.68□□□□□ -1.34
TCF4-288ENST00000637923 CEP164Q9UPV0 1460 aa6.68□□□□□ -1.34
TCF4-288ENST00000637923 PRDM2Q13029 1718 aa6.68□□□□□ -1.34
TCF4-288ENST00000637923 CHMP4CQ96CF2 233 aa6.68□□□□□ -1.34
TCF4-288ENST00000637923 ANKRD30AQ9BXX3 1397 aa6.68□□□□□ -1.34
TCF4-288ENST00000637923 TTLL12Q14166 644 aaPredicted RBP6.68□□□□□ -1.34
TCF4-288ENST00000637923 NAP1L5Q96NT1 182 aaPredicted RBP6.68□□□□□ -1.34
TCF4-288ENST00000637923 MPHOSPH9Q99550 1183 aa6.68□□□□□ -1.34
TCF4-288ENST00000637923 SF3A1Q15459 793 aaKnown RBP6.68□□□□□ -1.34
TCF4-288ENST00000637923 TOM1L2Q6ZVM7 507 aa6.68□□□□□ -1.34
TCF4-288ENST00000637923 ABTB2Q8N961 1025 aa6.68□□□□□ -1.34
TCF4-288ENST00000637923 SYNE3Q6ZMZ3 975 aa6.68□□□□□ -1.34
TCF4-288ENST00000637923 MCTP1Q6DN14 999 aa6.67□□□□□ -1.34
TCF4-288ENST00000637923 NFXL1Q6ZNB6 911 aa6.67□□□□□ -1.34
TCF4-288ENST00000637923 NEUROD6Q96NK8 337 aa6.67□□□□□ -1.34
TCF4-288ENST00000637923 GZF1Q9H116 711 aaPredicted RBP6.67□□□□□ -1.34
TCF4-288ENST00000637923 FHAD1B1AJZ9 1412 aa6.67□□□□□ -1.34
TCF4-288ENST00000637923 CCDC180Q9P1Z9 1646 aa6.67□□□□□ -1.34
TCF4-288ENST00000637923 RIC3Q7Z5B4 369 aa6.67□□□□□ -1.34
TCF4-288ENST00000637923 H3BQV1 296 aa6.67□□□□□ -1.34
TCF4-288ENST00000637923 HMOX1P09601 288 aa6.67□□□□□ -1.34
TCF4-288ENST00000637923 IFFO2Q5TF58 517 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms